RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 PSD4Q8NDX1 1056 aa12.77□□□□□ -0.36
DDX54-201ENST00000306014 BPIFB1Q8TDL5 484 aa12.77□□□□□ -0.36
DDX54-201ENST00000306014 C17orf50Q8WW18 174 aa12.77□□□□□ -0.36
DDX54-201ENST00000306014 UHRF1Q96T88 793 aaPredicted RBP12.77□□□□□ -0.36
DDX54-201ENST00000306014 UCKL1Q9NWZ5 548 aa12.77□□□□□ -0.36
DDX54-201ENST00000306014 CLCA3PQ9Y6N3 262 aa12.77□□□□□ -0.36
DDX54-201ENST00000306014 SHROOM3Q8TF72 1996 aa12.77□□□□□ -0.36
DDX54-201ENST00000306014 FAM172BPA6NC97 362 aa12.77□□□□□ -0.37
DDX54-201ENST00000306014 E7EQ34 232 aa12.77□□□□□ -0.37
DDX54-201ENST00000306014 OR7A17O14581 309 aa12.77□□□□□ -0.37
DDX54-201ENST00000306014 NUDT14O95848 222 aa12.77□□□□□ -0.37
DDX54-201ENST00000306014 IL3P08700 152 aa12.77□□□□□ -0.37
DDX54-201ENST00000306014 ZNF30P17039 623 aa12.77□□□□□ -0.37
DDX54-201ENST00000306014 HOXD9P28356 352 aaPredicted RBP12.77□□□□□ -0.37
DDX54-201ENST00000306014 MLLT10P55197 1068 aa12.77□□□□□ -0.37
DDX54-201ENST00000306014 DCDC1P59894 354 aa12.77□□□□□ -0.37
DDX54-201ENST00000306014 UGT3A2Q3SY77 523 aa12.77□□□□□ -0.37
DDX54-201ENST00000306014 ATAT1Q5SQI0 421 aa12.77□□□□□ -0.37
DDX54-201ENST00000306014 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.77□□□□□ -0.37
DDX54-201ENST00000306014 GJD3Q8N144 294 aa12.77□□□□□ -0.37
DDX54-201ENST00000306014 CLIP3Q96DZ5 547 aa12.77□□□□□ -0.37
DDX54-201ENST00000306014 PHIPQ8WWQ0 1821 aa12.77□□□□□ -0.37
DDX54-201ENST00000306014 DAPL1A0PJW8 107 aa12.77□□□□□ -0.37
DDX54-201ENST00000306014 SCAMP2O15127 329 aaKnown RBP12.77□□□□□ -0.37
DDX54-201ENST00000306014 AKAP8O43823 692 aaKnown RBP12.77□□□□□ -0.37
DDX54-201ENST00000306014 CDH11P55287 796 aa12.77□□□□□ -0.37
DDX54-201ENST00000306014 ZNF311Q5JNZ3 666 aa12.77□□□□□ -0.37
DDX54-201ENST00000306014 CPZQ66K79 652 aa12.77□□□□□ -0.37
DDX54-201ENST00000306014 NADSYN1Q6IA69 706 aa12.77□□□□□ -0.37
DDX54-201ENST00000306014 C22orf42Q6IC83 251 aa12.77□□□□□ -0.37
DDX54-201ENST00000306014 RBM23Q86U06 439 aaKnown RBP12.77□□□□□ -0.37
DDX54-201ENST00000306014 TEX26Q8N6G2 289 aa12.77□□□□□ -0.37
DDX54-201ENST00000306014 MGAT4BQ9UQ53 548 aa12.77□□□□□ -0.37
DDX54-201ENST00000306014 INSL5Q9Y5Q6 135 aa12.77□□□□□ -0.37
DDX54-201ENST00000306014 GON4LQ3T8J9 2241 aa12.77□□□□□ -0.37
DDX54-201ENST00000306014 A0A1W2PQ45 241 aaPredicted RBP12.76□□□□□ -0.37
DDX54-201ENST00000306014 A0A1W2PQY0 241 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 UBE2QL1A1L167 161 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 GLOD5A6NK44 160 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 FAM170BA6NMN3 283 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 PTTG1O95997 202 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 HLA-DQA2P01906 255 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 BMP4P12644 408 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 CAPZA2P47755 286 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 MLLT1Q03111 559 aaPredicted RBP12.76□□□□□ -0.37
DDX54-201ENST00000306014 RBBP4Q09028 425 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 LASP1Q14847 261 aaKnown RBP12.76□□□□□ -0.37
DDX54-201ENST00000306014 ZNHIT3Q15649 155 aaPredicted RBP12.76□□□□□ -0.37
DDX54-201ENST00000306014 PNCKQ6P2M8 343 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 IKBIPQ70UQ0 350 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 FAM129CQ86XR2 697 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 KLHL36Q8N4N3 616 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 NTMT1Q9BV86 223 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 SLC12A9Q9BXP2 914 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 LMAN2LQ9H0V9 348 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 TAF1LQ8IZX4 1826 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 IFNGP01579 166 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 ALPPL2P10696 532 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 FADDQ13158 208 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 KCNC3Q14003 757 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 SLC9A5Q14940 896 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 RGNQ15493 299 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 ARL9Q6T311 187 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 CRTC1Q6UUV9 634 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 PEX5LQ8IYB4 626 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 SMG7Q92540 1137 aaKnown RBP12.76□□□□□ -0.37
DDX54-201ENST00000306014 C12orf66Q96MD2 445 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 TMEM175Q9BSA9 504 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 SLC2A11Q9BYW1 496 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 CCDC59Q9P031 241 aaKnown RBP12.76□□□□□ -0.37
DDX54-201ENST00000306014 OR10H1Q9Y4A9 318 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 NUMA1Q14980 2115 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 A0A1B0GTL3 188 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 FAM92AA1XBS5 289 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 NPIPB15A6NHN6 443 aaPredicted RBP12.76□□□□□ -0.37
DDX54-201ENST00000306014 AGAP5A6NIR3 686 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 RIIAD1A6NNX1 92 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 ALPPP05187 535 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 CELP19835 753 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 CA5AP35218 305 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 CCR8P51685 355 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 SERPINA11Q86U17 422 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 OR8H3Q8N146 312 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 ZNF784Q8NCA9 323 aaPredicted RBP12.76□□□□□ -0.37
DDX54-201ENST00000306014 GPR26Q8NDV2 337 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 SRFBP1Q8NEF9 429 aaKnown RBP12.76□□□□□ -0.37
DDX54-201ENST00000306014 TFGQ92734 400 aaPredicted RBP12.76□□□□□ -0.37
DDX54-201ENST00000306014 C1QTNF7Q9BXJ2 289 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 RETREG1Q9H6L5 497 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 SLC16A8O95907 504 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 ACADMP11310 421 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 TCF3P15923 654 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 RPS3P23396 243 aaKnown RBP eCLIP12.76□□□□□ -0.37
DDX54-201ENST00000306014 HK3P52790 923 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 AAK1Q2M2I8 961 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 SMU1Q2TAY7 513 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 CHMP1BQ7LBR1 199 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 FAM220AQ7Z4H9 259 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 RHOXF1Q8NHV9 184 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 OVCA2Q8WZ82 227 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms