RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 SOWAHCQ53LP3 525 aaPredicted RBP12.34□□□□□ -0.43
HIF3A-204ENST00000300862 ARHGAP15Q53QZ3 475 aa12.34□□□□□ -0.43
HIF3A-204ENST00000300862 PAGE2Q7Z2X7 111 aa12.34□□□□□ -0.43
HIF3A-204ENST00000300862 ZNF547Q8IVP9 402 aa12.34□□□□□ -0.43
HIF3A-204ENST00000300862 LGI4Q8N135 537 aa12.34□□□□□ -0.43
HIF3A-204ENST00000300862 NXPE3Q969Y0 559 aa12.34□□□□□ -0.43
HIF3A-204ENST00000300862 DTD2Q96FN9 168 aa12.34□□□□□ -0.43
HIF3A-204ENST00000300862 ZFYVE19Q96K21 471 aa12.34□□□□□ -0.43
HIF3A-204ENST00000300862 ATP6V1HQ9UI12 483 aa12.34□□□□□ -0.43
HIF3A-204ENST00000300862 RAB23Q9ULC3 237 aa12.34□□□□□ -0.43
HIF3A-204ENST00000300862 CORO2BQ9UQ03 480 aa12.34□□□□□ -0.43
HIF3A-204ENST00000300862 CFAP20Q9Y6A4 193 aaKnown RBP12.34□□□□□ -0.43
HIF3A-204ENST00000300862 EFCAB9A8MZ26 197 aa12.34□□□□□ -0.43
HIF3A-204ENST00000300862 RTCAO00442 366 aaKnown RBP12.34□□□□□ -0.43
HIF3A-204ENST00000300862 PCDH17O14917 1159 aa12.34□□□□□ -0.43
HIF3A-204ENST00000300862 LILRB5O75023 590 aa12.34□□□□□ -0.43
HIF3A-204ENST00000300862 IL3P08700 152 aa12.34□□□□□ -0.43
HIF3A-204ENST00000300862 EPCAMP16422 314 aa12.34□□□□□ -0.43
HIF3A-204ENST00000300862 CD40LGP29965 261 aa12.34□□□□□ -0.43
HIF3A-204ENST00000300862 IRS1P35568 1242 aa12.34□□□□□ -0.43
HIF3A-204ENST00000300862 GPR1P46091 355 aa12.34□□□□□ -0.43
HIF3A-204ENST00000300862 DGKGP49619 791 aa12.34□□□□□ -0.43
HIF3A-204ENST00000300862 PRMT2P55345 433 aa12.34□□□□□ -0.43
HIF3A-204ENST00000300862 DHCR24Q15392 516 aa12.34□□□□□ -0.43
HIF3A-204ENST00000300862 TEAD4Q15561 434 aa12.34□□□□□ -0.43
HIF3A-204ENST00000300862 LRRC26Q2I0M4 334 aa12.34□□□□□ -0.43
HIF3A-204ENST00000300862 IFI44LQ53G44 452 aa12.34□□□□□ -0.43
HIF3A-204ENST00000300862 PLD3Q8IV08 490 aa12.34□□□□□ -0.43
HIF3A-204ENST00000300862 SLC44A2Q8IWA5 706 aaPredicted RBP12.34□□□□□ -0.43
HIF3A-204ENST00000300862 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.34□□□□□ -0.43
HIF3A-204ENST00000300862 CACTIN-AS1Q8N1I8 211 aa12.34□□□□□ -0.43
HIF3A-204ENST00000300862 OR9A1PQ8NGU1 263 aa12.34□□□□□ -0.43
HIF3A-204ENST00000300862 FAM83CQ9BQN1 747 aa12.34□□□□□ -0.43
HIF3A-204ENST00000300862 GABARAPL3Q9BY60 117 aa12.34□□□□□ -0.43
HIF3A-204ENST00000300862 BHLHE41Q9C0J9 482 aaPredicted RBP12.34□□□□□ -0.43
HIF3A-204ENST00000300862 CCNB1IP1Q9NPC3 277 aa12.34□□□□□ -0.43
HIF3A-204ENST00000300862 C1GALT1Q9NS00 363 aa12.34□□□□□ -0.43
HIF3A-204ENST00000300862 TAS2R16Q9NYV7 291 aa12.34□□□□□ -0.43
HIF3A-204ENST00000300862 TMEM98Q9Y2Y6 226 aa12.34□□□□□ -0.43
HIF3A-204ENST00000300862 FAM227AF5H4B4 570 aa12.33□□□□□ -0.43
HIF3A-204ENST00000300862 POP7O75817 140 aaKnown RBP12.33□□□□□ -0.43
HIF3A-204ENST00000300862 STSP08842 583 aa12.33□□□□□ -0.43
HIF3A-204ENST00000300862 GGT2P36268 569 aa12.33□□□□□ -0.43
HIF3A-204ENST00000300862 CRISP3P54108 245 aa12.33□□□□□ -0.43
HIF3A-204ENST00000300862 CDK6Q00534 326 aa12.33□□□□□ -0.43
HIF3A-204ENST00000300862 ZNF658BQ4V348 819 aaPredicted RBP12.33□□□□□ -0.43
HIF3A-204ENST00000300862 FAM83HQ6ZRV2 1179 aaPredicted RBP12.33□□□□□ -0.43
HIF3A-204ENST00000300862 KIAA0907Q7Z7F0 614 aaPredicted RBP12.33□□□□□ -0.43
HIF3A-204ENST00000300862 NLRP8Q86W28 1048 aa12.33□□□□□ -0.43
HIF3A-204ENST00000300862 OR52N2Q8NGI0 321 aa12.33□□□□□ -0.43
HIF3A-204ENST00000300862 PHF10Q8WUB8 498 aaKnown RBP12.33□□□□□ -0.43
HIF3A-204ENST00000300862 SLC5A11Q8WWX8 675 aa12.33□□□□□ -0.43
HIF3A-204ENST00000300862 METTL2AQ96IZ6 378 aaKnown RBP12.33□□□□□ -0.43
HIF3A-204ENST00000300862 SIGLEC11Q96RL6 698 aa12.33□□□□□ -0.43
HIF3A-204ENST00000300862 BCL7BQ9BQE9 202 aa12.33□□□□□ -0.43
HIF3A-204ENST00000300862 ABCG4Q9H172 646 aa12.33□□□□□ -0.43
HIF3A-204ENST00000300862 TPK1Q9H3S4 243 aa12.33□□□□□ -0.43
HIF3A-204ENST00000300862 RNF167Q9H6Y7 350 aa12.33□□□□□ -0.43
HIF3A-204ENST00000300862 C5AR2Q9P296 337 aa12.33□□□□□ -0.43
HIF3A-204ENST00000300862 TBC1D14Q9P2M4 693 aa12.33□□□□□ -0.43
HIF3A-204ENST00000300862 CHD9Q3L8U1 2897 aa12.33□□□□□ -0.44
HIF3A-204ENST00000300862 DNAH14Q0VDD8 3507 aa12.33□□□□□ -0.44
HIF3A-204ENST00000300862 PRRT4C9JH25 899 aa12.33□□□□□ -0.44
HIF3A-204ENST00000300862 M0R082 166 aa12.33□□□□□ -0.44
HIF3A-204ENST00000300862 ADAMDEC1O15204 470 aa12.33□□□□□ -0.44
HIF3A-204ENST00000300862 GPR37L1O60883 481 aa12.33□□□□□ -0.44
HIF3A-204ENST00000300862 CEBPBP17676 345 aa12.33□□□□□ -0.44
HIF3A-204ENST00000300862 PCYT1AP49585 367 aa12.33□□□□□ -0.44
HIF3A-204ENST00000300862 CLK1P49759 484 aaKnown RBP12.33□□□□□ -0.44
HIF3A-204ENST00000300862 SLC13A2Q13183 592 aa12.33□□□□□ -0.44
HIF3A-204ENST00000300862 RPS26P11Q5JNZ5 115 aaPredicted RBP12.33□□□□□ -0.44
HIF3A-204ENST00000300862 NXPE4Q6UWF7 544 aa12.33□□□□□ -0.44
HIF3A-204ENST00000300862 KLHDC8AQ8IYD2 350 aa12.33□□□□□ -0.44
HIF3A-204ENST00000300862 MRPL43Q8N983 215 aaKnown RBP12.33□□□□□ -0.44
HIF3A-204ENST00000300862 OR4C15Q8NGM1 316 aa12.33□□□□□ -0.44
HIF3A-204ENST00000300862 GGHQ92820 318 aa12.33□□□□□ -0.44
HIF3A-204ENST00000300862 ARRDC3Q96B67 414 aa12.33□□□□□ -0.44
HIF3A-204ENST00000300862 REPS1Q96D71 796 aa12.33□□□□□ -0.44
HIF3A-204ENST00000300862 ZHX1-C8orf76Q96EF9 292 aa12.33□□□□□ -0.44
HIF3A-204ENST00000300862 COQ10AQ96MF6 247 aa12.33□□□□□ -0.44
HIF3A-204ENST00000300862 SPATA9Q9BWV2 254 aa12.33□□□□□ -0.44
HIF3A-204ENST00000300862 SLC6A16Q9GZN6 736 aa12.33□□□□□ -0.44
HIF3A-204ENST00000300862 SLIRPQ9GZT3 109 aaKnown RBP12.33□□□□□ -0.44
HIF3A-204ENST00000300862 EHD1Q9H4M9 534 aa12.33□□□□□ -0.44
HIF3A-204ENST00000300862 NFKBIL1Q9UBC1 381 aaPredicted RBP12.33□□□□□ -0.44
HIF3A-204ENST00000300862 DKK3Q9UBP4 350 aa12.33□□□□□ -0.44
HIF3A-204ENST00000300862 KLHL3Q9UH77 587 aa12.33□□□□□ -0.44
HIF3A-204ENST00000300862 PSORS1C1Q9UIG5 152 aa12.33□□□□□ -0.44
HIF3A-204ENST00000300862 PLXND1Q9Y4D7 1925 aa12.32□□□□□ -0.44
HIF3A-204ENST00000300862 A0A1W2PRB8 838 aa12.32□□□□□ -0.44
HIF3A-204ENST00000300862 E9PQ18 207 aa12.32□□□□□ -0.44
HIF3A-204ENST00000300862 CYP17A1P05093 508 aa12.32□□□□□ -0.44
HIF3A-204ENST00000300862 TCEA1P23193 301 aaKnown RBP12.32□□□□□ -0.44
HIF3A-204ENST00000300862 GADD45AP24522 165 aa12.32□□□□□ -0.44
HIF3A-204ENST00000300862 EIF2DP41214 584 aaKnown RBP12.32□□□□□ -0.44
HIF3A-204ENST00000300862 VIPR2P41587 438 aa12.32□□□□□ -0.44
HIF3A-204ENST00000300862 SLC6A11P48066 632 aa12.32□□□□□ -0.44
HIF3A-204ENST00000300862 ST8SIA6P61647 398 aa12.32□□□□□ -0.44
HIF3A-204ENST00000300862 PCDH1Q08174 1060 aa12.32□□□□□ -0.44
HIF3A-204ENST00000300862 CARTPTQ16568 116 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms