RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 CDNFQ49AH0 187 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 GTPBP8Q8N3Z3 284 aaPredicted RBP14.36□□□□□ -0.11
SCN3B-201ENST00000299333 OR14C36Q8NHC7 312 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 SLC25A44Q96H78 314 aaPredicted RBP14.36□□□□□ -0.11
SCN3B-201ENST00000299333 SLC2A6Q9UGQ3 507 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 MGAT4BQ9UQ53 548 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 PCDHB14Q9Y5E9 798 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 EVX2Q03828 476 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 PPP1R3AQ16821 1122 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 CHRFAM7AQ494W8 412 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 ASRGL1Q7L266 308 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 RPL10LQ96L21 214 aaKnown RBP14.35□□□□□ -0.11
SCN3B-201ENST00000299333 KLHL15Q96M94 604 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 FCRL5Q96RD9 977 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 ZMAT5Q9UDW3 170 aaKnown RBP14.35□□□□□ -0.11
SCN3B-201ENST00000299333 KCNJ13O60928 360 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 POP4O95707 220 aaKnown RBP14.35□□□□□ -0.11
SCN3B-201ENST00000299333 EPHX1P07099 455 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 IL1R2P27930 398 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 ETV5P41161 510 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 PRKXP51817 358 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 RAB4BP61018 213 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 BCL2L15Q5TBC7 163 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 DNM1P34Q6PK57 102 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 UGT2A3Q6UWM9 527 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 NSMAFQ92636 917 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 OSTF1Q92882 214 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 RIT1Q92963 219 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 PCED1BQ96HM7 432 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 COQ10AQ96MF6 247 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 MGLLQ99685 303 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 CCDC32Q9BV29 185 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 TBL1XR1Q9BZK7 514 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 OR2AG1Q9H205 316 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 UTS2RQ9UKP6 389 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 CHRNB1P11230 501 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 SERPINF1P36955 418 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 GDF5P43026 501 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 SLC26A5P58743 744 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 PMS2P3Q13401 168 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 GALEQ14376 348 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 EXOC3L2Q2M3D2 409 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 NKAPLQ5M9Q1 402 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 TTPALQ9BTX7 342 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 A0A1B0GVI7 797 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 LCHNA4D1U4 455 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 ARHGEF15O94989 841 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 SPDEFO95238 335 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 STSP08842 583 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 HLCSP50747 726 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 CCR8P51685 355 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 MEDAGQ5VYS4 303 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 TATDN1Q6P1N9 297 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 MYNNQ9NPC7 610 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 FAM198AQ9UFP1 575 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 KLF15Q9UIH9 416 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 A0A0A6YYH2 397 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 A6NJ64 397 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 NPIPA5E9PKD4 350 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 ARVCFO00192 962 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 PTTG1O95997 202 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 PAHP00439 452 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 STATHP02808 62 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 GBAP04062 536 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 PRNPP04156 253 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 HLA-DQB2P05538 268 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 DPYSL2Q16555 572 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 SPATS1Q496A3 300 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.35□□□□□ -0.11
SCN3B-201ENST00000299333 NANOGP8Q6NSW7 305 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 RNF130Q86XS8 419 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 SOCS4Q8WXH5 440 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 RGMAQ96B86 450 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 ADAM7Q9H2U9 754 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 NANOGQ9H9S0 305 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 UFSP2Q9NUQ7 469 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 ZNF701Q9NV72 531 aaPredicted RBP14.35□□□□□ -0.11
SCN3B-201ENST00000299333 NPIPA1Q9UND3 350 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 WDR45Q9Y484 360 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 CPQQ9Y646 472 aa14.35□□□□□ -0.11
SCN3B-201ENST00000299333 SOCS2O14508 198 aa14.34□□□□□ -0.11
SCN3B-201ENST00000299333 RGS9O75916 674 aaPredicted RBP14.34□□□□□ -0.11
SCN3B-201ENST00000299333 C6orf47O95873 294 aa14.34□□□□□ -0.11
SCN3B-201ENST00000299333 IFNA1P01562 189 aa14.34□□□□□ -0.11
SCN3B-201ENST00000299333 PRKCGP05129 697 aa14.34□□□□□ -0.11
SCN3B-201ENST00000299333 EDNRBP24530 442 aa14.34□□□□□ -0.11
SCN3B-201ENST00000299333 EPHX2P34913 555 aa14.34□□□□□ -0.11
SCN3B-201ENST00000299333 POU4F2Q12837 409 aa14.34□□□□□ -0.11
SCN3B-201ENST00000299333 ZNF630Q2M218 657 aaPredicted RBP14.34□□□□□ -0.11
SCN3B-201ENST00000299333 PNCKQ6P2M8 343 aa14.34□□□□□ -0.11
SCN3B-201ENST00000299333 DNAAF1Q8NEP3 725 aa14.34□□□□□ -0.11
SCN3B-201ENST00000299333 NELL2Q99435 816 aa14.34□□□□□ -0.11
SCN3B-201ENST00000299333 ABCG4Q9H172 646 aa14.34□□□□□ -0.11
SCN3B-201ENST00000299333 A0A1B0GVG6 124 aa14.34□□□□□ -0.11
SCN3B-201ENST00000299333 CAPN14A8MX76 684 aa14.34□□□□□ -0.11
SCN3B-201ENST00000299333 LSSP48449 732 aa14.34□□□□□ -0.11
SCN3B-201ENST00000299333 BTN1A1Q13410 526 aa14.34□□□□□ -0.11
SCN3B-201ENST00000299333 CLVS2Q5SYC1 327 aa14.34□□□□□ -0.11
SCN3B-201ENST00000299333 ZNF705AQ6ZN79 300 aaPredicted RBP14.34□□□□□ -0.11
SCN3B-201ENST00000299333 NPAS3Q8IXF0 933 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms