RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 A0A1W2PRB8 838 aa8.72□□□□□ -1.01
PDPN-201ENST00000294489 METTL12A8MUP2 240 aa8.72□□□□□ -1.01
PDPN-201ENST00000294489 H0YAE9 185 aa8.72□□□□□ -1.01
PDPN-201ENST00000294489 H3BNH8 94 aa8.72□□□□□ -1.01
PDPN-201ENST00000294489 PABPC4LP0CB38 370 aaKnown RBP8.72□□□□□ -1.01
PDPN-201ENST00000294489 AK4P27144 223 aaPredicted RBP8.72□□□□□ -1.01
PDPN-201ENST00000294489 CRATP43155 626 aa8.72□□□□□ -1.01
PDPN-201ENST00000294489 GSTM5P46439 218 aa8.72□□□□□ -1.01
PDPN-201ENST00000294489 UBE2IP63279 158 aaKnown RBP8.72□□□□□ -1.01
PDPN-201ENST00000294489 EPS8Q12929 822 aa8.72□□□□□ -1.01
PDPN-201ENST00000294489 SPIDRQ14159 915 aa8.72□□□□□ -1.01
PDPN-201ENST00000294489 CYBRD1Q53TN4 286 aa8.72□□□□□ -1.01
PDPN-201ENST00000294489 ZNF425Q6IV72 752 aa8.72□□□□□ -1.01
PDPN-201ENST00000294489 TTC33Q6PID6 262 aaPredicted RBP8.72□□□□□ -1.01
PDPN-201ENST00000294489 TBPL2Q6SJ96 375 aa8.72□□□□□ -1.01
PDPN-201ENST00000294489 IQCHQ86VS3 1027 aa8.72□□□□□ -1.01
PDPN-201ENST00000294489 NUDT13Q86X67 352 aa8.72□□□□□ -1.01
PDPN-201ENST00000294489 ZDHHC21Q8IVQ6 265 aa8.72□□□□□ -1.01
PDPN-201ENST00000294489 ADGRF3Q8IZF5 1079 aa8.72□□□□□ -1.01
PDPN-201ENST00000294489 TBC1D19Q8N5T2 526 aa8.72□□□□□ -1.01
PDPN-201ENST00000294489 C11orf65Q8NCR3 313 aa8.72□□□□□ -1.01
PDPN-201ENST00000294489 TSPAN14Q8NG11 270 aa8.72□□□□□ -1.01
PDPN-201ENST00000294489 RBM4BQ9BQ04 359 aaKnown RBP8.72□□□□□ -1.01
PDPN-201ENST00000294489 SLC35A5Q9BS91 424 aa8.72□□□□□ -1.01
PDPN-201ENST00000294489 RBM4Q9BWF3 364 aaKnown RBP8.72□□□□□ -1.01
PDPN-201ENST00000294489 SORBS1Q9BX66 1292 aaKnown RBP8.72□□□□□ -1.01
PDPN-201ENST00000294489 FOXQ1Q9C009 403 aa8.72□□□□□ -1.01
PDPN-201ENST00000294489 RAD21L1Q9H4I0 556 aa8.72□□□□□ -1.01
PDPN-201ENST00000294489 MRPS30Q9NP92 439 aaKnown RBP8.72□□□□□ -1.01
PDPN-201ENST00000294489 ADAM29Q9UKF5 820 aa8.72□□□□□ -1.01
PDPN-201ENST00000294489 PRAMEF33A0A0G2JMD5 474 aa8.71□□□□□ -1.01
PDPN-201ENST00000294489 PLOD2O00469 737 aa8.71□□□□□ -1.01
PDPN-201ENST00000294489 CLEC3AO75596 197 aa8.71□□□□□ -1.01
PDPN-201ENST00000294489 FKBP9O95302 570 aa8.71□□□□□ -1.01
PDPN-201ENST00000294489 SNAP29O95721 258 aa8.71□□□□□ -1.01
PDPN-201ENST00000294489 C1QCP02747 245 aa8.71□□□□□ -1.01
PDPN-201ENST00000294489 ALPLP05186 524 aa8.71□□□□□ -1.01
PDPN-201ENST00000294489 SERPIND1P05546 499 aa8.71□□□□□ -1.01
PDPN-201ENST00000294489 GNAO1P09471 354 aa8.71□□□□□ -1.01
PDPN-201ENST00000294489 THRBP10828 461 aa8.71□□□□□ -1.01
PDPN-201ENST00000294489 DDCP20711 480 aa8.71□□□□□ -1.01
PDPN-201ENST00000294489 SLC19A1P41440 591 aa8.71□□□□□ -1.01
PDPN-201ENST00000294489 MAGEA2P43356 314 aa8.71□□□□□ -1.01
PDPN-201ENST00000294489 ARHGDIAP52565 204 aa8.71□□□□□ -1.01
PDPN-201ENST00000294489 FADDQ13158 208 aa8.71□□□□□ -1.01
PDPN-201ENST00000294489 ADPRMQ3LIE5 342 aa8.71□□□□□ -1.01
PDPN-201ENST00000294489 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.71□□□□□ -1.01
PDPN-201ENST00000294489 PRPF38BQ5VTL8 546 aaKnown RBP8.71□□□□□ -1.01
PDPN-201ENST00000294489 TRIM40Q6P9F5 258 aa8.71□□□□□ -1.01
PDPN-201ENST00000294489 EIF3MQ7L2H7 374 aaKnown RBP8.71□□□□□ -1.01
PDPN-201ENST00000294489 PATL1Q86TB9 770 aaKnown RBP8.71□□□□□ -1.01
PDPN-201ENST00000294489 HIPK1Q86Z02 1210 aa8.71□□□□□ -1.01
PDPN-201ENST00000294489 FRMD1Q8N878 549 aa8.71□□□□□ -1.01
PDPN-201ENST00000294489 PJA1Q8NG27 643 aa8.71□□□□□ -1.01
PDPN-201ENST00000294489 OR2L3Q8NG85 312 aa8.71□□□□□ -1.01
PDPN-201ENST00000294489 OR5K1Q8NHB7 308 aa8.71□□□□□ -1.01
PDPN-201ENST00000294489 CIDECQ96AQ7 238 aaPredicted RBP8.71□□□□□ -1.01
PDPN-201ENST00000294489 IL1RAPQ9NPH3 570 aa8.71□□□□□ -1.01
PDPN-201ENST00000294489 ADPRHL2Q9NX46 363 aa8.71□□□□□ -1.01
PDPN-201ENST00000294489 UTS2RQ9UKP6 389 aa8.71□□□□□ -1.01
PDPN-201ENST00000294489 FAM221BA6H8Z2 402 aa8.71□□□□□ -1.01
PDPN-201ENST00000294489 SCAMP1O15126 338 aa8.71□□□□□ -1.01
PDPN-201ENST00000294489 NDUFS4O43181 175 aa8.71□□□□□ -1.01
PDPN-201ENST00000294489 TNFSF14O43557 240 aa8.71□□□□□ -1.01
PDPN-201ENST00000294489 RASGRP1O95267 797 aa8.71□□□□□ -1.01
PDPN-201ENST00000294489 KRT75O95678 551 aa8.71□□□□□ -1.01
PDPN-201ENST00000294489 TFAP2AP05549 437 aa8.71□□□□□ -1.01
PDPN-201ENST00000294489 CHRM5P08912 532 aaPredicted RBP8.71□□□□□ -1.01
PDPN-201ENST00000294489 NELFEP18615 380 aaKnown RBP8.71□□□□□ -1.01
PDPN-201ENST00000294489 CD27P26842 260 aa8.71□□□□□ -1.01
PDPN-201ENST00000294489 BSGP35613 385 aa8.71□□□□□ -1.01
PDPN-201ENST00000294489 CHI3L1P36222 383 aaPredicted RBP8.71□□□□□ -1.01
PDPN-201ENST00000294489 NR1H2P55055 460 aa8.71□□□□□ -1.01
PDPN-201ENST00000294489 UBXN2BQ14CS0 331 aa8.71□□□□□ -1.01
PDPN-201ENST00000294489 FOXB2Q5VYV0 432 aa8.71□□□□□ -1.01
PDPN-201ENST00000294489 SPESP1Q6UW49 350 aa8.71□□□□□ -1.01
PDPN-201ENST00000294489 CBLL1Q75N03 491 aa8.71□□□□□ -1.01
PDPN-201ENST00000294489 RD3Q7Z3Z2 195 aa8.71□□□□□ -1.01
PDPN-201ENST00000294489 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.71□□□□□ -1.01
PDPN-201ENST00000294489 NAGSQ8N159 534 aa8.71□□□□□ -1.01
PDPN-201ENST00000294489 ZNF786Q8N393 782 aa8.71□□□□□ -1.01
PDPN-201ENST00000294489 DEFB123Q8N688 67 aa8.71□□□□□ -1.01
PDPN-201ENST00000294489 OR52N2Q8NGI0 321 aa8.71□□□□□ -1.01
PDPN-201ENST00000294489 SLC6A16Q9GZN6 736 aa8.71□□□□□ -1.01
PDPN-201ENST00000294489 LHX9Q9NQ69 397 aa8.71□□□□□ -1.01
PDPN-201ENST00000294489 SNRNP200O75643 2136 aaKnown RBP8.71□□□□□ -1.02
PDPN-201ENST00000294489 TRIOBPQ9H2D6 2365 aa8.71□□□□□ -1.02
PDPN-201ENST00000294489 MYOCOSA0A1B0GUC4 107 aa8.71□□□□□ -1.02
PDPN-201ENST00000294489 EME2A4GXA9 379 aaPredicted RBP8.71□□□□□ -1.02
PDPN-201ENST00000294489 RTCAO00442 366 aaKnown RBP8.71□□□□□ -1.02
PDPN-201ENST00000294489 FABP3P05413 133 aa8.71□□□□□ -1.02
PDPN-201ENST00000294489 PCGF2P35227 344 aa8.71□□□□□ -1.02
PDPN-201ENST00000294489 SOAT1P35610 550 aa8.71□□□□□ -1.02
PDPN-201ENST00000294489 AHRP35869 848 aa8.71□□□□□ -1.02
PDPN-201ENST00000294489 PRIM2P49643 509 aa8.71□□□□□ -1.02
PDPN-201ENST00000294489 RELAQ04206 551 aa8.71□□□□□ -1.02
PDPN-201ENST00000294489 RBBP4Q09028 425 aa8.71□□□□□ -1.02
PDPN-201ENST00000294489 HYAL2Q12891 473 aa8.71□□□□□ -1.02
PDPN-201ENST00000294489 APOFQ13790 326 aa8.71□□□□□ -1.02
PDPN-201ENST00000294489 UBE3DQ7Z6J8 389 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms