RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 PRM3Q9NNZ6 103 aa25.38■■□□□ 1.65
SSU72-201ENST00000291386 LANCL2Q9NS86 450 aa25.38■■□□□ 1.65
SSU72-201ENST00000291386 MKL2Q9ULH7 1088 aa25.38■■□□□ 1.65
SSU72-201ENST00000291386 MAN2B2Q9Y2E5 1009 aa25.38■■□□□ 1.65
SSU72-201ENST00000291386 MGAQ8IWI9 3026 aa25.38■■□□□ 1.65
SSU72-201ENST00000291386 A0A1W2PQ72 361 aa25.37■■□□□ 1.65
SSU72-201ENST00000291386 SERTM1A2A2V5 107 aa25.37■■□□□ 1.65
SSU72-201ENST00000291386 MANBAO00462 879 aa25.37■■□□□ 1.65
SSU72-201ENST00000291386 PLPP1O14494 284 aa25.37■■□□□ 1.65
SSU72-201ENST00000291386 HEXBP07686 556 aa25.37■■□□□ 1.65
SSU72-201ENST00000291386 FHP07954 510 aa25.37■■□□□ 1.65
SSU72-201ENST00000291386 HSD3B1P14060 373 aa25.37■■□□□ 1.65
SSU72-201ENST00000291386 HIST1H1TP22492 207 aaPredicted RBP25.37■■□□□ 1.65
SSU72-201ENST00000291386 JAK1P23458 1154 aa25.37■■□□□ 1.65
SSU72-201ENST00000291386 HSD3B2P26439 372 aa25.37■■□□□ 1.65
SSU72-201ENST00000291386 CERS1P27544 350 aa25.37■■□□□ 1.65
SSU72-201ENST00000291386 SERPINB5P36952 375 aa25.37■■□□□ 1.65
SSU72-201ENST00000291386 SERPINB4P48594 390 aa25.37■■□□□ 1.65
SSU72-201ENST00000291386 EFNA3P52797 238 aa25.37■■□□□ 1.65
SSU72-201ENST00000291386 MPP2Q14168 576 aa25.37■■□□□ 1.65
SSU72-201ENST00000291386 LINC00303Q3SY05 128 aa25.37■■□□□ 1.65
SSU72-201ENST00000291386 TMEM205Q6UW68 189 aa25.37■■□□□ 1.65
SSU72-201ENST00000291386 HOMEZQ8IX15 550 aa25.37■■□□□ 1.65
SSU72-201ENST00000291386 ACOT4Q8N9L9 421 aa25.37■■□□□ 1.65
SSU72-201ENST00000291386 TMEM102Q8N9M5 508 aaPredicted RBP25.37■■□□□ 1.65
SSU72-201ENST00000291386 PLPP5Q8NEB5 264 aa25.37■■□□□ 1.65
SSU72-201ENST00000291386 WBP1Q96G27 269 aa25.37■■□□□ 1.65
SSU72-201ENST00000291386 VPS50Q96JG6 964 aa25.37■■□□□ 1.65
SSU72-201ENST00000291386 ZNF717Q9BY31 904 aaPredicted RBP25.37■■□□□ 1.65
SSU72-201ENST00000291386 VN1R1Q9GZP7 353 aa25.37■■□□□ 1.65
SSU72-201ENST00000291386 LYRM4Q9HD34 91 aa25.37■■□□□ 1.65
SSU72-201ENST00000291386 FARSBQ9NSD9 589 aaKnown RBP25.37■■□□□ 1.65
SSU72-201ENST00000291386 P4HTMQ9NXG6 502 aa25.37■■□□□ 1.65
SSU72-201ENST00000291386 DAPP1Q9UN19 280 aa25.37■■□□□ 1.65
SSU72-201ENST00000291386 RTCAO00442 366 aaKnown RBP25.36■■□□□ 1.65
SSU72-201ENST00000291386 PEX12O00623 359 aa25.36■■□□□ 1.65
SSU72-201ENST00000291386 BIRC5O15392 142 aa25.36■■□□□ 1.65
SSU72-201ENST00000291386 SH3BGRLO75368 114 aa25.36■■□□□ 1.65
SSU72-201ENST00000291386 ULK1O75385 1050 aa25.36■■□□□ 1.65
SSU72-201ENST00000291386 HMOX2P30519 316 aa25.36■■□□□ 1.65
SSU72-201ENST00000291386 CCR10P46092 362 aa25.36■■□□□ 1.65
SSU72-201ENST00000291386 RAP1GDS1P52306 607 aa25.36■■□□□ 1.65
SSU72-201ENST00000291386 RAB38P57729 211 aa25.36■■□□□ 1.65
SSU72-201ENST00000291386 ATP1A4Q13733 1029 aa25.36■■□□□ 1.65
SSU72-201ENST00000291386 KIRREL2Q6UWL6 708 aa25.36■■□□□ 1.65
SSU72-201ENST00000291386 ZCCHC7Q8N3Z6 543 aaKnown RBP25.36■■□□□ 1.65
SSU72-201ENST00000291386 EXTL1Q92935 676 aa25.36■■□□□ 1.65
SSU72-201ENST00000291386 KCNK9Q9NPC2 374 aa25.36■■□□□ 1.65
SSU72-201ENST00000291386 LOC400499M0QZD8 3231 aa25.35■■□□□ 1.65
SSU72-201ENST00000291386 LOC102723996A0A087X1L8 192 aa25.35■■□□□ 1.65
SSU72-201ENST00000291386 SAP18O00422 153 aaKnown RBP25.35■■□□□ 1.65
SSU72-201ENST00000291386 ALOX12BO75342 701 aa25.35■■□□□ 1.65
SSU72-201ENST00000291386 BSGP35613 385 aa25.35■■□□□ 1.65
SSU72-201ENST00000291386 SSR2P43308 183 aa25.35■■□□□ 1.65
SSU72-201ENST00000291386 RRADP55042 308 aa25.35■■□□□ 1.65
SSU72-201ENST00000291386 LIM2P55344 173 aa25.35■■□□□ 1.65
SSU72-201ENST00000291386 MAGOHP61326 146 aaKnown RBP25.35■■□□□ 1.65
SSU72-201ENST00000291386 RHAGQ02094 409 aa25.35■■□□□ 1.65
SSU72-201ENST00000291386 CSTF3Q12996 717 aaKnown RBP25.35■■□□□ 1.65
SSU72-201ENST00000291386 TCHHL1Q5QJ38 904 aaPredicted RBP25.35■■□□□ 1.65
SSU72-201ENST00000291386 NUDCD3Q8IVD9 361 aa25.35■■□□□ 1.65
SSU72-201ENST00000291386 FER1L6-AS2Q96M78 137 aa25.35■■□□□ 1.65
SSU72-201ENST00000291386 DDX31Q9H8H2 851 aaKnown RBP25.35■■□□□ 1.65
SSU72-201ENST00000291386 NMRK1Q9NWW6 199 aa25.35■■□□□ 1.65
SSU72-201ENST00000291386 KCMF1Q9P0J7 381 aa25.35■■□□□ 1.65
SSU72-201ENST00000291386 CACNA1GO43497 2377 aa25.35■■□□□ 1.65
SSU72-201ENST00000291386 PSMD12O00232 456 aaPredicted RBP25.34■■□□□ 1.65
SSU72-201ENST00000291386 FOXA1P55317 472 aa25.34■■□□□ 1.65
SSU72-201ENST00000291386 RCN2Q14257 317 aa25.34■■□□□ 1.65
SSU72-201ENST00000291386 MINDY4Q4G0A6 757 aa25.34■■□□□ 1.65
SSU72-201ENST00000291386 SGO1Q5FBB7 561 aa25.34■■□□□ 1.65
SSU72-201ENST00000291386 QSOX2Q6ZRP7 698 aa25.34■■□□□ 1.65
SSU72-201ENST00000291386 GBP7Q8N8V2 638 aaPredicted RBP25.34■■□□□ 1.65
SSU72-201ENST00000291386 OR11G2Q8NGC1 345 aa25.34■■□□□ 1.65
SSU72-201ENST00000291386 KCNA7Q96RP8 456 aa25.34■■□□□ 1.65
SSU72-201ENST00000291386 UBL7Q96S82 380 aaPredicted RBP25.34■■□□□ 1.65
SSU72-201ENST00000291386 SH3GL2Q99962 352 aa25.34■■□□□ 1.65
SSU72-201ENST00000291386 AHSPQ9NZD4 102 aa25.34■■□□□ 1.65
SSU72-201ENST00000291386 TIMM22Q9Y584 194 aa25.34■■□□□ 1.65
SSU72-201ENST00000291386 ARGFXA6NJG6 315 aa25.33■■□□□ 1.65
SSU72-201ENST00000291386 C8orf89P0DMQ9 161 aa25.33■■□□□ 1.65
SSU72-201ENST00000291386 FAM219BQ5XKK7 198 aa25.33■■□□□ 1.65
SSU72-201ENST00000291386 CUZD1Q86UP6 607 aa25.33■■□□□ 1.65
SSU72-201ENST00000291386 NUDT13Q86X67 352 aa25.33■■□□□ 1.65
SSU72-201ENST00000291386 METTL4Q8N3J2 472 aa25.33■■□□□ 1.65
SSU72-201ENST00000291386 LSM14AQ8ND56 463 aaKnown RBP25.33■■□□□ 1.65
SSU72-201ENST00000291386 ARL8AQ96BM9 186 aa25.33■■□□□ 1.65
SSU72-201ENST00000291386 RBCK1Q9BYM8 510 aa25.33■■□□□ 1.65
SSU72-201ENST00000291386 EML4Q9HC35 981 aaKnown RBP25.33■■□□□ 1.65
SSU72-201ENST00000291386 TNFRSF12AQ9NP84 129 aa25.33■■□□□ 1.65
SSU72-201ENST00000291386 ADAM29Q9UKF5 820 aa25.33■■□□□ 1.65
SSU72-201ENST00000291386 MMACHCQ9Y4U1 282 aa25.33■■□□□ 1.65
SSU72-201ENST00000291386 SCN2AQ99250 2005 aa25.32■■□□□ 1.64
SSU72-201ENST00000291386 A0A0A6YYD5 115 aa25.32■■□□□ 1.64
SSU72-201ENST00000291386 TMEM120BA0PK00 339 aa25.32■■□□□ 1.64
SSU72-201ENST00000291386 CYR61O00622 381 aa25.32■■□□□ 1.64
SSU72-201ENST00000291386 FGF4P08620 206 aa25.32■■□□□ 1.64
SSU72-201ENST00000291386 UROSP10746 265 aa25.32■■□□□ 1.64
SSU72-201ENST00000291386 ACPPP15309 386 aa25.32■■□□□ 1.64
SSU72-201ENST00000291386 HTR6P50406 440 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms