RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 XAGE5Q8WWM1 108 aa10.96□□□□□ -0.65
NPC1L1-201ENST00000289547 PSKH2Q96QS6 385 aa10.96□□□□□ -0.65
NPC1L1-201ENST00000289547 RHBGQ9H310 441 aa10.96□□□□□ -0.65
NPC1L1-201ENST00000289547 LRRC14BA6NHZ5 514 aa10.96□□□□□ -0.65
NPC1L1-201ENST00000289547 CPSF4LA6NMK7 179 aaKnown RBP10.96□□□□□ -0.65
NPC1L1-201ENST00000289547 SLC1A7O00341 560 aa10.96□□□□□ -0.65
NPC1L1-201ENST00000289547 GFRA2O00451 464 aa10.96□□□□□ -0.65
NPC1L1-201ENST00000289547 EPOP01588 193 aa10.96□□□□□ -0.65
NPC1L1-201ENST00000289547 C8GP07360 202 aa10.96□□□□□ -0.65
NPC1L1-201ENST00000289547 PRPS2P11908 318 aa10.96□□□□□ -0.65
NPC1L1-201ENST00000289547 DNASE1P24855 282 aa10.96□□□□□ -0.65
NPC1L1-201ENST00000289547 RPL4P36578 427 aaKnown RBP10.96□□□□□ -0.65
NPC1L1-201ENST00000289547 ETV4P43268 484 aa10.96□□□□□ -0.65
NPC1L1-201ENST00000289547 STK19P49842 368 aaPredicted RBP10.96□□□□□ -0.65
NPC1L1-201ENST00000289547 HNRNPKP61978 463 aaKnown RBP eCLIP10.96□□□□□ -0.65
NPC1L1-201ENST00000289547 OLIG2Q13516 323 aa10.96□□□□□ -0.65
NPC1L1-201ENST00000289547 AMZ1Q400G9 498 aa10.96□□□□□ -0.65
NPC1L1-201ENST00000289547 LRRC66Q68CR7 880 aa10.96□□□□□ -0.65
NPC1L1-201ENST00000289547 ZNF730Q6ZMV8 503 aa10.96□□□□□ -0.65
NPC1L1-201ENST00000289547 BTN2A1Q7KYR7 527 aa10.96□□□□□ -0.65
NPC1L1-201ENST00000289547 COMMD2Q86X83 199 aa10.96□□□□□ -0.65
NPC1L1-201ENST00000289547 TMIEQ8NEW7 156 aa10.96□□□□□ -0.65
NPC1L1-201ENST00000289547 RNASE11Q8TAA1 199 aaKnown RBP10.96□□□□□ -0.65
NPC1L1-201ENST00000289547 UHRF1Q96T88 793 aaPredicted RBP10.96□□□□□ -0.65
NPC1L1-201ENST00000289547 HERPUD2Q9BSE4 406 aa10.96□□□□□ -0.65
NPC1L1-201ENST00000289547 NUDT4Q9NZJ9 180 aa10.96□□□□□ -0.65
NPC1L1-201ENST00000289547 RIMKLBQ9ULI2 386 aa10.96□□□□□ -0.65
NPC1L1-201ENST00000289547 USP3Q9Y6I4 520 aa10.96□□□□□ -0.65
NPC1L1-201ENST00000289547 OR5K4A6NMS3 321 aa10.96□□□□□ -0.66
NPC1L1-201ENST00000289547 GMPRP36959 345 aa10.96□□□□□ -0.66
NPC1L1-201ENST00000289547 RABIFP47224 123 aa10.96□□□□□ -0.66
NPC1L1-201ENST00000289547 FNTBP49356 437 aa10.96□□□□□ -0.66
NPC1L1-201ENST00000289547 HMGCS1Q01581 520 aa10.96□□□□□ -0.66
NPC1L1-201ENST00000289547 HNRNPA0Q13151 305 aaKnown RBP10.96□□□□□ -0.66
NPC1L1-201ENST00000289547 GANABQ14697 944 aaKnown RBP10.96□□□□□ -0.66
NPC1L1-201ENST00000289547 RAB41Q5JT25 222 aa10.96□□□□□ -0.66
NPC1L1-201ENST00000289547 NANOGP8Q6NSW7 305 aa10.96□□□□□ -0.66
NPC1L1-201ENST00000289547 DCP2Q8IU60 420 aaKnown RBP10.96□□□□□ -0.66
NPC1L1-201ENST00000289547 PM20D2Q8IYS1 436 aa10.96□□□□□ -0.66
NPC1L1-201ENST00000289547 COL26A1Q96A83 441 aa10.96□□□□□ -0.66
NPC1L1-201ENST00000289547 PYURFQ96I23 114 aa10.96□□□□□ -0.66
NPC1L1-201ENST00000289547 AARSD1Q9BTE6 412 aaKnown RBP10.96□□□□□ -0.66
NPC1L1-201ENST00000289547 NAA50Q9GZZ1 169 aaKnown RBP10.96□□□□□ -0.66
NPC1L1-201ENST00000289547 NANOGQ9H9S0 305 aa10.96□□□□□ -0.66
NPC1L1-201ENST00000289547 MKS1Q9NXB0 559 aa10.96□□□□□ -0.66
NPC1L1-201ENST00000289547 B4GALT6Q9UBX8 382 aa10.96□□□□□ -0.66
NPC1L1-201ENST00000289547 B3GNT3Q9Y2A9 372 aa10.96□□□□□ -0.66
NPC1L1-201ENST00000289547 OR2AT4A6NND4 320 aa10.96□□□□□ -0.66
NPC1L1-201ENST00000289547 UPK1BO75841 260 aa10.96□□□□□ -0.66
NPC1L1-201ENST00000289547 SRFP11831 508 aa10.96□□□□□ -0.66
NPC1L1-201ENST00000289547 GLULP15104 373 aa10.96□□□□□ -0.66
NPC1L1-201ENST00000289547 CD70P32970 193 aa10.96□□□□□ -0.66
NPC1L1-201ENST00000289547 CEBPGP53567 150 aa10.96□□□□□ -0.66
NPC1L1-201ENST00000289547 INHBCP55103 352 aa10.96□□□□□ -0.66
NPC1L1-201ENST00000289547 MANFP55145 182 aaKnown RBP10.96□□□□□ -0.66
NPC1L1-201ENST00000289547 NFE2L1Q14494 772 aa10.96□□□□□ -0.66
NPC1L1-201ENST00000289547 RNF44Q7L0R7 432 aa10.96□□□□□ -0.66
NPC1L1-201ENST00000289547 WDTC1Q8N5D0 677 aa10.96□□□□□ -0.66
NPC1L1-201ENST00000289547 CCDC120Q96HB5 630 aa10.96□□□□□ -0.66
NPC1L1-201ENST00000289547 ZNF597Q96LX8 424 aa10.96□□□□□ -0.66
NPC1L1-201ENST00000289547 HHIPQ96QV1 700 aa10.96□□□□□ -0.66
NPC1L1-201ENST00000289547 EBPLQ9BY08 206 aa10.96□□□□□ -0.66
NPC1L1-201ENST00000289547 FAM118AQ9NWS6 357 aa10.96□□□□□ -0.66
NPC1L1-201ENST00000289547 THUMPD1Q9NXG2 353 aaKnown RBP10.96□□□□□ -0.66
NPC1L1-201ENST00000289547 PCDHGB6Q9Y5F9 930 aa10.96□□□□□ -0.66
NPC1L1-201ENST00000289547 ANKRD12Q6UB98 2062 aa10.96□□□□□ -0.66
NPC1L1-201ENST00000289547 PRMT3O60678 531 aa10.95□□□□□ -0.66
NPC1L1-201ENST00000289547 ERAL1O75616 437 aaKnown RBP10.95□□□□□ -0.66
NPC1L1-201ENST00000289547 PRKCGP05129 697 aa10.95□□□□□ -0.66
NPC1L1-201ENST00000289547 ANXA3P12429 323 aa10.95□□□□□ -0.66
NPC1L1-201ENST00000289547 DIO3P55073 304 aa10.95□□□□□ -0.66
NPC1L1-201ENST00000289547 ST3GAL4Q11206 333 aa10.95□□□□□ -0.66
NPC1L1-201ENST00000289547 FGFBP1Q14512 234 aa10.95□□□□□ -0.66
NPC1L1-201ENST00000289547 LYSMD3Q7Z3D4 306 aa10.95□□□□□ -0.66
NPC1L1-201ENST00000289547 MAPK15Q8TD08 544 aa10.95□□□□□ -0.66
NPC1L1-201ENST00000289547 RFKQ969G6 155 aa10.95□□□□□ -0.66
NPC1L1-201ENST00000289547 SMURF1Q9HCE7 757 aa10.95□□□□□ -0.66
NPC1L1-201ENST00000289547 GALPQ9UBC7 116 aa10.95□□□□□ -0.66
NPC1L1-201ENST00000289547 FAM86C2PA6NEL3 165 aa10.95□□□□□ -0.66
NPC1L1-201ENST00000289547 B4GAT1O43505 415 aa10.95□□□□□ -0.66
NPC1L1-201ENST00000289547 AKAP8O43823 692 aaKnown RBP10.95□□□□□ -0.66
NPC1L1-201ENST00000289547 HLA-DQA2P01906 255 aa10.95□□□□□ -0.66
NPC1L1-201ENST00000289547 FUCA1P04066 466 aa10.95□□□□□ -0.66
NPC1L1-201ENST00000289547 DHRS4L1P0CG22 281 aa10.95□□□□□ -0.66
NPC1L1-201ENST00000289547 PITPNAQ00169 270 aa10.95□□□□□ -0.66
NPC1L1-201ENST00000289547 GRIN2CQ14957 1233 aa10.95□□□□□ -0.66
NPC1L1-201ENST00000289547 PHF19Q5T6S3 580 aa10.95□□□□□ -0.66
NPC1L1-201ENST00000289547 NOXA1Q86UR1 476 aa10.95□□□□□ -0.66
NPC1L1-201ENST00000289547 ALDH16A1Q8IZ83 802 aa10.95□□□□□ -0.66
NPC1L1-201ENST00000289547 Q8N9G6 341 aaPredicted RBP10.95□□□□□ -0.66
NPC1L1-201ENST00000289547 FAM174AQ8TBP5 190 aa10.95□□□□□ -0.66
NPC1L1-201ENST00000289547 HAVCR1Q96D42 359 aa10.95□□□□□ -0.66
NPC1L1-201ENST00000289547 SCRN2Q96FV2 425 aa10.95□□□□□ -0.66
NPC1L1-201ENST00000289547 KANTRA0A1W2PQU2 76 aa10.95□□□□□ -0.66
NPC1L1-201ENST00000289547 NUPL2O15504 423 aaKnown RBP10.95□□□□□ -0.66
NPC1L1-201ENST00000289547 KIAA0513O60268 411 aa10.95□□□□□ -0.66
NPC1L1-201ENST00000289547 TPST2O60704 377 aa10.95□□□□□ -0.66
NPC1L1-201ENST00000289547 ANXA4P09525 319 aaPredicted RBP10.95□□□□□ -0.66
NPC1L1-201ENST00000289547 PIM1P11309 404 aaPredicted RBP10.95□□□□□ -0.66
NPC1L1-201ENST00000289547 GNA13Q14344 377 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms