RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 PLAG1Q6DJT9 500 aa12.67□□□□□ -0.38
SLC28A1-201ENST00000286749 COMMD6Q7Z4G1 85 aa12.67□□□□□ -0.38
SLC28A1-201ENST00000286749 RAVER1Q8IY67 606 aaKnown RBP12.67□□□□□ -0.38
SLC28A1-201ENST00000286749 TMEM159Q96B96 161 aa12.67□□□□□ -0.38
SLC28A1-201ENST00000286749 VPS35Q96QK1 796 aa12.67□□□□□ -0.38
SLC28A1-201ENST00000286749 MAPKAP1Q9BPZ7 522 aa12.67□□□□□ -0.38
SLC28A1-201ENST00000286749 EMILIN2Q9BXX0 1053 aa12.67□□□□□ -0.38
SLC28A1-201ENST00000286749 EXOSC4Q9NPD3 245 aaKnown RBP12.67□□□□□ -0.38
SLC28A1-201ENST00000286749 CLN6Q9NWW5 311 aa12.67□□□□□ -0.38
SLC28A1-201ENST00000286749 RAB23Q9ULC3 237 aa12.67□□□□□ -0.38
SLC28A1-201ENST00000286749 HS3ST2Q9Y278 367 aa12.67□□□□□ -0.38
SLC28A1-201ENST00000286749 PLXND1Q9Y4D7 1925 aa12.67□□□□□ -0.38
SLC28A1-201ENST00000286749 TRBC2A0A5B9 178 aa12.67□□□□□ -0.38
SLC28A1-201ENST00000286749 ZAR1LA6NP61 321 aa12.67□□□□□ -0.38
SLC28A1-201ENST00000286749 PDZK1P1A8MUH7 402 aa12.67□□□□□ -0.38
SLC28A1-201ENST00000286749 H3BQ06 376 aaPredicted RBP12.67□□□□□ -0.38
SLC28A1-201ENST00000286749 POP4O95707 220 aaKnown RBP12.67□□□□□ -0.38
SLC28A1-201ENST00000286749 CATP04040 527 aaKnown RBP12.67□□□□□ -0.38
SLC28A1-201ENST00000286749 SOAT1P35610 550 aa12.67□□□□□ -0.38
SLC28A1-201ENST00000286749 ETV3P41162 512 aa12.67□□□□□ -0.38
SLC28A1-201ENST00000286749 CTSCP53634 463 aa12.67□□□□□ -0.38
SLC28A1-201ENST00000286749 OR2B6P58173 313 aa12.67□□□□□ -0.38
SLC28A1-201ENST00000286749 LRRC74AQ0VAA2 488 aa12.67□□□□□ -0.38
SLC28A1-201ENST00000286749 MPEG1Q2M385 716 aa12.67□□□□□ -0.38
SLC28A1-201ENST00000286749 BCL7AQ4VC05 210 aa12.67□□□□□ -0.38
SLC28A1-201ENST00000286749 MPP7Q5T2T1 576 aa12.67□□□□□ -0.38
SLC28A1-201ENST00000286749 IER5LQ5T953 404 aa12.67□□□□□ -0.38
SLC28A1-201ENST00000286749 MED27Q6P2C8 311 aa12.67□□□□□ -0.38
SLC28A1-201ENST00000286749 TRIM40Q6P9F5 258 aa12.67□□□□□ -0.38
SLC28A1-201ENST00000286749 CCDC80Q76M96 950 aa12.67□□□□□ -0.38
SLC28A1-201ENST00000286749 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.67□□□□□ -0.38
SLC28A1-201ENST00000286749 OXR1Q8N573 874 aa12.67□□□□□ -0.38
SLC28A1-201ENST00000286749 LMNTD1Q8N9Z9 388 aa12.67□□□□□ -0.38
SLC28A1-201ENST00000286749 OR56A3Q8NH54 315 aa12.67□□□□□ -0.38
SLC28A1-201ENST00000286749 WDR48Q8TAF3 677 aa12.67□□□□□ -0.38
SLC28A1-201ENST00000286749 CXorf40BQ96DE9 158 aa12.67□□□□□ -0.38
SLC28A1-201ENST00000286749 IL4I1Q96RQ9 567 aa12.67□□□□□ -0.38
SLC28A1-201ENST00000286749 CNPPD1Q9BV87 410 aa12.67□□□□□ -0.38
SLC28A1-201ENST00000286749 CPEB1Q9BZB8 566 aaKnown RBP12.67□□□□□ -0.38
SLC28A1-201ENST00000286749 TMEM38AQ9H6F2 299 aa12.67□□□□□ -0.38
SLC28A1-201ENST00000286749 MARCH7Q9H992 704 aa12.67□□□□□ -0.38
SLC28A1-201ENST00000286749 SMURF1Q9HCE7 757 aa12.67□□□□□ -0.38
SLC28A1-201ENST00000286749 C11orf16Q9NQ32 467 aa12.67□□□□□ -0.38
SLC28A1-201ENST00000286749 CNOT2Q9NZN8 540 aaKnown RBP12.67□□□□□ -0.38
SLC28A1-201ENST00000286749 TBC1D24Q9ULP9 559 aa12.67□□□□□ -0.38
SLC28A1-201ENST00000286749 ENPP4Q9Y6X5 453 aa12.67□□□□□ -0.38
SLC28A1-201ENST00000286749 SH3D21A4FU49 640 aa12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 FADS2P1A8MWK0 482 aa12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 H3BM21 787 aa12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 CYP7B1O75881 506 aa12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 KRT8P05787 483 aa12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 FURINP09958 794 aa12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 GABRR2P28476 465 aa12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 TNFSF8P32971 234 aa12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 CRISP1P54107 249 aa12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 C2orf80Q0P641 193 aa12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 ELOAQ14241 798 aaKnown RBP12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 LRRC26Q2I0M4 334 aa12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 LEXMQ3ZCV2 418 aa12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 CRB2Q5IJ48 1285 aa12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 SLCO4C1Q6ZQN7 724 aa12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 HTR3DQ70Z44 454 aa12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 ARMCX6Q7L4S7 300 aa12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 CPXM2Q8N436 756 aa12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 ZNF513Q8N8E2 541 aaPredicted RBP12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 PPCDCQ96CD2 204 aa12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 SCLYQ96I15 445 aa12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 OPALINQ96PE5 141 aa12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 TRNT1Q96Q11 434 aaKnown RBP12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 RIOK2Q9BVS4 552 aaKnown RBP12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 TAPBPLQ9BX59 468 aa12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 SMG9Q9H0W8 520 aaKnown RBP12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 TPK1Q9H3S4 243 aa12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 NMNAT1Q9HAN9 279 aaPredicted RBP12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 GPBP1L1Q9HC44 474 aaPredicted RBP12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 MRPL17Q9NRX2 175 aaKnown RBP12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 SH2B3Q9UQQ2 575 aa12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 NPC1O15118 1278 aa12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 RGS5O15539 181 aa12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 ENTPD6O75354 484 aa12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 AP2A2O94973 939 aa12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 SOD2P04179 222 aa12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 ZNF24P17028 368 aa12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 PTPN2P17706 415 aa12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 PBLDP30039 288 aaPredicted RBP12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 SOX3P41225 446 aa12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 STARD3Q14849 445 aa12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 PRSS53Q2L4Q9 553 aa12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 ZNF630Q2M218 657 aaPredicted RBP12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 NXNL2Q5VZ03 156 aa12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 FRMPD2BQ6IN97 320 aa12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 TMC5Q6UXY8 1006 aa12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 GDPD4Q6W3E5 623 aa12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 NRARPQ7Z6K4 114 aa12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 SLC44A2Q8IWA5 706 aaPredicted RBP12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 TAGAPQ8N103 731 aa12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 CACTIN-AS1Q8N1I8 211 aa12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 VANGL1Q8TAA9 524 aaPredicted RBP12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 MYLIPQ8WY64 445 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 303.7 ms