RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 DLGAP3O95886 979 aa17.55■□□□□ 0.4
PDLIM3-201ENST00000284767 EPHA2P29317 976 aa17.55■□□□□ 0.4
PDLIM3-201ENST00000284767 CTSKP43235 329 aa17.55■□□□□ 0.4
PDLIM3-201ENST00000284767 ITGA1P56199 1179 aa17.55■□□□□ 0.4
PDLIM3-201ENST00000284767 PRKCDQ05655 676 aa17.55■□□□□ 0.4
PDLIM3-201ENST00000284767 TSTA3Q13630 321 aaPredicted RBP17.55■□□□□ 0.4
PDLIM3-201ENST00000284767 VMACQ2NL98 169 aa17.55■□□□□ 0.4
PDLIM3-201ENST00000284767 C2orf27AQ580R0 203 aa17.55■□□□□ 0.4
PDLIM3-201ENST00000284767 TMEM184AQ6ZMB5 413 aa17.55■□□□□ 0.4
PDLIM3-201ENST00000284767 THOC6Q86W42 341 aaKnown RBP17.55■□□□□ 0.4
PDLIM3-201ENST00000284767 PROX1Q92786 737 aa17.55■□□□□ 0.4
PDLIM3-201ENST00000284767 KLK6Q92876 244 aa17.55■□□□□ 0.4
PDLIM3-201ENST00000284767 HHIPQ96QV1 700 aa17.55■□□□□ 0.4
PDLIM3-201ENST00000284767 SLC6A17Q9H1V8 727 aa17.55■□□□□ 0.4
PDLIM3-201ENST00000284767 PRR23AA6NEV1 266 aa17.55■□□□□ 0.4
PDLIM3-201ENST00000284767 KCNK2O95069 426 aa17.55■□□□□ 0.4
PDLIM3-201ENST00000284767 B3GALT4O96024 378 aa17.55■□□□□ 0.4
PDLIM3-201ENST00000284767 PCCBP05166 539 aa17.55■□□□□ 0.4
PDLIM3-201ENST00000284767 PRPH2P23942 346 aa17.55■□□□□ 0.4
PDLIM3-201ENST00000284767 TACR1P25103 407 aa17.55■□□□□ 0.4
PDLIM3-201ENST00000284767 IMPA1P29218 277 aa17.55■□□□□ 0.4
PDLIM3-201ENST00000284767 TRPC1P48995 793 aa17.55■□□□□ 0.4
PDLIM3-201ENST00000284767 VLDLRP98155 873 aa17.55■□□□□ 0.4
PDLIM3-201ENST00000284767 SF1Q15637 639 aaKnown RBP17.55■□□□□ 0.4
PDLIM3-201ENST00000284767 LRIT3Q3SXY7 679 aa17.55■□□□□ 0.4
PDLIM3-201ENST00000284767 TMEM52BQ4KMG9 183 aa17.55■□□□□ 0.4
PDLIM3-201ENST00000284767 ENTHD1Q8IYW4 607 aa17.55■□□□□ 0.4
PDLIM3-201ENST00000284767 SLC7A5P1Q8MH63 180 aa17.55■□□□□ 0.4
PDLIM3-201ENST00000284767 NELL1Q92832 810 aa17.55■□□□□ 0.4
PDLIM3-201ENST00000284767 APIPQ96GX9 242 aa17.55■□□□□ 0.4
PDLIM3-201ENST00000284767 HRASLS5Q96KN8 279 aa17.55■□□□□ 0.4
PDLIM3-201ENST00000284767 COPS4Q9BT78 406 aa17.55■□□□□ 0.4
PDLIM3-201ENST00000284767 GABARAPL3Q9BY60 117 aa17.55■□□□□ 0.4
PDLIM3-201ENST00000284767 TM7SF3Q9NS93 570 aa17.55■□□□□ 0.4
PDLIM3-201ENST00000284767 PPT2Q9UMR5 302 aa17.55■□□□□ 0.4
PDLIM3-201ENST00000284767 QSOX1O00391 747 aa17.54■□□□□ 0.4
PDLIM3-201ENST00000284767 DYRK3O43781 588 aa17.54■□□□□ 0.4
PDLIM3-201ENST00000284767 PCDH8O95206 1070 aa17.54■□□□□ 0.4
PDLIM3-201ENST00000284767 KDELR2P33947 212 aa17.54■□□□□ 0.4
PDLIM3-201ENST00000284767 SLC14A1Q13336 389 aa17.54■□□□□ 0.4
PDLIM3-201ENST00000284767 CAMK2GQ13555 558 aaPredicted RBP17.54■□□□□ 0.4
PDLIM3-201ENST00000284767 DDX39BQ13838 428 aaKnown RBP17.54■□□□□ 0.4
PDLIM3-201ENST00000284767 MLIPQ5VWP3 458 aa17.54■□□□□ 0.4
PDLIM3-201ENST00000284767 ZCCHC8Q6NZY4 707 aaKnown RBP17.54■□□□□ 0.4
PDLIM3-201ENST00000284767 TTC23LQ6PF05 361 aa17.54■□□□□ 0.4
PDLIM3-201ENST00000284767 FAM83HQ6ZRV2 1179 aaPredicted RBP17.54■□□□□ 0.4
PDLIM3-201ENST00000284767 CBLL1Q75N03 491 aa17.54■□□□□ 0.4
PDLIM3-201ENST00000284767 EIF3MQ7L2H7 374 aaKnown RBP17.54■□□□□ 0.4
PDLIM3-201ENST00000284767 TRMT11Q7Z4G4 463 aaKnown RBP17.54■□□□□ 0.4
PDLIM3-201ENST00000284767 P3H2Q8IVL5 708 aa17.54■□□□□ 0.4
PDLIM3-201ENST00000284767 ZZZ3Q8IYH5 903 aa17.54■□□□□ 0.4
PDLIM3-201ENST00000284767 C6orf62Q9GZU0 229 aaPredicted RBP17.54■□□□□ 0.4
PDLIM3-201ENST00000284767 PLCXD1Q9NUJ7 323 aa17.54■□□□□ 0.4
PDLIM3-201ENST00000284767 THUMPD1Q9NXG2 353 aaKnown RBP17.54■□□□□ 0.4
PDLIM3-201ENST00000284767 GPRC5BQ9NZH0 403 aa17.54■□□□□ 0.4
PDLIM3-201ENST00000284767 CCDC59Q9P031 241 aaKnown RBP17.54■□□□□ 0.4
PDLIM3-201ENST00000284767 A0A1W2PP55 124 aa17.54■□□□□ 0.4
PDLIM3-201ENST00000284767 FAM47E-STBD1D6RA91 191 aa17.54■□□□□ 0.4
PDLIM3-201ENST00000284767 POP7O75817 140 aaKnown RBP17.54■□□□□ 0.4
PDLIM3-201ENST00000284767 DIRAS1O95057 198 aa17.54■□□□□ 0.4
PDLIM3-201ENST00000284767 C9P02748 559 aa17.54■□□□□ 0.4
PDLIM3-201ENST00000284767 IRF8Q02556 426 aa17.54■□□□□ 0.4
PDLIM3-201ENST00000284767 RAB30Q15771 203 aa17.54■□□□□ 0.4
PDLIM3-201ENST00000284767 SYT16Q17RD7 645 aa17.54■□□□□ 0.4
PDLIM3-201ENST00000284767 ITPRIPL2Q3MIP1 535 aa17.54■□□□□ 0.4
PDLIM3-201ENST00000284767 XKR6Q5GH73 641 aa17.54■□□□□ 0.4
PDLIM3-201ENST00000284767 TPRG1LQ5T0D9 272 aa17.54■□□□□ 0.4
PDLIM3-201ENST00000284767 KIAA1211LQ6NV74 962 aa17.54■□□□□ 0.4
PDLIM3-201ENST00000284767 DNASE1L2Q92874 299 aa17.54■□□□□ 0.4
PDLIM3-201ENST00000284767 MYDGFQ969H8 173 aa17.54■□□□□ 0.4
PDLIM3-201ENST00000284767 HSH2DQ96JZ2 352 aa17.54■□□□□ 0.4
PDLIM3-201ENST00000284767 TSSK3Q96PN8 268 aa17.54■□□□□ 0.4
PDLIM3-201ENST00000284767 MTERF1Q99551 399 aaKnown RBP17.54■□□□□ 0.4
PDLIM3-201ENST00000284767 MYOCQ99972 504 aa17.54■□□□□ 0.4
PDLIM3-201ENST00000284767 TRMT61BQ9BVS5 477 aaKnown RBP17.54■□□□□ 0.4
PDLIM3-201ENST00000284767 S1PR5Q9H228 398 aa17.54■□□□□ 0.4
PDLIM3-201ENST00000284767 TRIM39Q9HCM9 518 aa17.54■□□□□ 0.4
PDLIM3-201ENST00000284767 M0R082 166 aa17.53■□□□□ 0.4
PDLIM3-201ENST00000284767 CATP04040 527 aaKnown RBP17.53■□□□□ 0.4
PDLIM3-201ENST00000284767 APODP05090 189 aa17.53■□□□□ 0.4
PDLIM3-201ENST00000284767 ACPPP15309 386 aa17.53■□□□□ 0.4
PDLIM3-201ENST00000284767 S100A5P33763 92 aa17.53■□□□□ 0.4
PDLIM3-201ENST00000284767 SEPHS1P49903 392 aa17.53■□□□□ 0.4
PDLIM3-201ENST00000284767 TIGD6Q17RP2 521 aa17.53■□□□□ 0.4
PDLIM3-201ENST00000284767 AGBL4Q5VU57 503 aa17.53■□□□□ 0.4
PDLIM3-201ENST00000284767 HEATR4Q86WZ0 1026 aa17.53■□□□□ 0.4
PDLIM3-201ENST00000284767 L3MBTL4Q8NA19 623 aa17.53■□□□□ 0.4
PDLIM3-201ENST00000284767 KBTBD8Q8NFY9 601 aa17.53■□□□□ 0.4
PDLIM3-201ENST00000284767 UBE2FQ969M7 185 aa17.53■□□□□ 0.4
PDLIM3-201ENST00000284767 CMTM7Q96FZ5 175 aa17.53■□□□□ 0.4
PDLIM3-201ENST00000284767 EGLN2Q96KS0 407 aa17.53■□□□□ 0.4
PDLIM3-201ENST00000284767 EPYCQ99645 322 aa17.53■□□□□ 0.4
PDLIM3-201ENST00000284767 SIAEQ9HAT2 523 aa17.53■□□□□ 0.4
PDLIM3-201ENST00000284767 SPATA7Q9P0W8 599 aa17.53■□□□□ 0.4
PDLIM3-201ENST00000284767 PSORS1C1Q9UIG5 152 aa17.53■□□□□ 0.4
PDLIM3-201ENST00000284767 LRATO95237 230 aa17.53■□□□□ 0.4
PDLIM3-201ENST00000284767 KCNK5O95279 499 aa17.53■□□□□ 0.4
PDLIM3-201ENST00000284767 SDC1P18827 310 aa17.53■□□□□ 0.4
PDLIM3-201ENST00000284767 DPTQ07507 201 aa17.53■□□□□ 0.4
PDLIM3-201ENST00000284767 DOC2AQ14183 400 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms