RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 MED26O95402 600 aa16.08■□□□□ 0.16
SQLE-201ENST00000265896 BCHEP06276 602 aa16.08■□□□□ 0.16
SQLE-201ENST00000265896 SDHBP21912 280 aa16.08■□□□□ 0.16
SQLE-201ENST00000265896 EPHB3P54753 998 aa16.08■□□□□ 0.16
SQLE-201ENST00000265896 HSPB3Q12988 150 aa16.08■□□□□ 0.16
SQLE-201ENST00000265896 MICAQ29983 383 aa16.08■□□□□ 0.16
SQLE-201ENST00000265896 ERICH5Q6P6B1 374 aa16.08■□□□□ 0.16
SQLE-201ENST00000265896 ITPKCQ96DU7 683 aa16.08■□□□□ 0.16
SQLE-201ENST00000265896 SDHCQ99643 169 aaPredicted RBP16.08■□□□□ 0.16
SQLE-201ENST00000265896 ACER3Q9NUN7 267 aa16.08■□□□□ 0.16
SQLE-201ENST00000265896 TMA7Q9Y2S6 64 aaKnown RBP16.08■□□□□ 0.16
SQLE-201ENST00000265896 PDZK1P1A8MUH7 402 aa16.07■□□□□ 0.16
SQLE-201ENST00000265896 UGT2B15P54855 530 aa16.07■□□□□ 0.16
SQLE-201ENST00000265896 BAK1Q16611 211 aa16.07■□□□□ 0.16
SQLE-201ENST00000265896 GCNT6Q5T4J0 391 aa16.07■□□□□ 0.16
SQLE-201ENST00000265896 GLCCI1Q86VQ1 547 aa16.07■□□□□ 0.16
SQLE-201ENST00000265896 TRAPPC5Q8IUR0 188 aa16.07■□□□□ 0.16
SQLE-201ENST00000265896 TRIM48Q8IWZ4 208 aa16.07■□□□□ 0.16
SQLE-201ENST00000265896 EPYCQ99645 322 aa16.07■□□□□ 0.16
SQLE-201ENST00000265896 MACROD1Q9BQ69 325 aa16.07■□□□□ 0.16
SQLE-201ENST00000265896 YIPF4Q9BSR8 244 aa16.07■□□□□ 0.16
SQLE-201ENST00000265896 HOXD1Q9GZZ0 328 aa16.07■□□□□ 0.16
SQLE-201ENST00000265896 NMNAT1Q9HAN9 279 aaPredicted RBP16.07■□□□□ 0.16
SQLE-201ENST00000265896 SPATA6Q9NWH7 488 aaPredicted RBP16.07■□□□□ 0.16
SQLE-201ENST00000265896 SCAMP1O15126 338 aa16.07■□□□□ 0.16
SQLE-201ENST00000265896 OR10H3O60404 316 aa16.07■□□□□ 0.16
SQLE-201ENST00000265896 IL3P08700 152 aa16.07■□□□□ 0.16
SQLE-201ENST00000265896 TNFSF8P32971 234 aa16.07■□□□□ 0.16
SQLE-201ENST00000265896 OPRD1P41143 372 aa16.07■□□□□ 0.16
SQLE-201ENST00000265896 HNMTP50135 292 aa16.07■□□□□ 0.16
SQLE-201ENST00000265896 OR2B6P58173 313 aa16.07■□□□□ 0.16
SQLE-201ENST00000265896 TBPL1P62380 186 aa16.07■□□□□ 0.16
SQLE-201ENST00000265896 SEC23BQ15437 767 aa16.07■□□□□ 0.16
SQLE-201ENST00000265896 TBCEQ15813 527 aaPredicted RBP16.07■□□□□ 0.16
SQLE-201ENST00000265896 LYPLAL1Q5VWZ2 237 aa16.07■□□□□ 0.16
SQLE-201ENST00000265896 TRMT11Q7Z4G4 463 aaKnown RBP16.07■□□□□ 0.16
SQLE-201ENST00000265896 ELMOD1Q8N336 334 aa16.07■□□□□ 0.16
SQLE-201ENST00000265896 EMILIN2Q9BXX0 1053 aa16.07■□□□□ 0.16
SQLE-201ENST00000265896 CHST8Q9H2A9 424 aa16.07■□□□□ 0.16
SQLE-201ENST00000265896 TOR4AQ9NXH8 423 aa16.07■□□□□ 0.16
SQLE-201ENST00000265896 AP3M1Q9Y2T2 418 aa16.07■□□□□ 0.16
SQLE-201ENST00000265896 NOX1Q9Y5S8 564 aa16.07■□□□□ 0.16
SQLE-201ENST00000265896 ADAMDEC1O15204 470 aa16.06■□□□□ 0.16
SQLE-201ENST00000265896 CCL16O15467 120 aa16.06■□□□□ 0.16
SQLE-201ENST00000265896 TEX28O15482 410 aa16.06■□□□□ 0.16
SQLE-201ENST00000265896 SOCS5O75159 536 aa16.06■□□□□ 0.16
SQLE-201ENST00000265896 SERPIND1P05546 499 aa16.06■□□□□ 0.16
SQLE-201ENST00000265896 IL1RNP18510 177 aa16.06■□□□□ 0.16
SQLE-201ENST00000265896 LIM2P55344 173 aa16.06■□□□□ 0.16
SQLE-201ENST00000265896 CSTF3Q12996 717 aaKnown RBP16.06■□□□□ 0.16
SQLE-201ENST00000265896 FADDQ13158 208 aa16.06■□□□□ 0.16
SQLE-201ENST00000265896 SMU1Q2TAY7 513 aa16.06■□□□□ 0.16
SQLE-201ENST00000265896 FAM20CQ8IXL6 584 aa16.06■□□□□ 0.16
SQLE-201ENST00000265896 ZNF480Q8WV37 535 aa16.06■□□□□ 0.16
SQLE-201ENST00000265896 PPCDCQ96CD2 204 aa16.06■□□□□ 0.16
SQLE-201ENST00000265896 TCEAL4Q96EI5 215 aa16.06■□□□□ 0.16
SQLE-201ENST00000265896 COL21A1Q96P44 957 aa16.06■□□□□ 0.16
SQLE-201ENST00000265896 BARHL1Q9BZE3 327 aa16.06■□□□□ 0.16
SQLE-201ENST00000265896 ERVW-1Q9UQF0 538 aa16.06■□□□□ 0.16
SQLE-201ENST00000265896 HSPE1-MOB4S4R3N1 261 aa16.06■□□□□ 0.16
SQLE-201ENST00000265896 SNX4O95219 450 aa16.06■□□□□ 0.16
SQLE-201ENST00000265896 MRPS15P82914 257 aaKnown RBP16.06■□□□□ 0.16
SQLE-201ENST00000265896 LRRC26Q2I0M4 334 aa16.06■□□□□ 0.16
SQLE-201ENST00000265896 Q6ZNB5 142 aa16.06■□□□□ 0.16
SQLE-201ENST00000265896 NANOGNBQ7Z5D8 188 aa16.06■□□□□ 0.16
SQLE-201ENST00000265896 CAMKK1Q8N5S9 505 aa16.06■□□□□ 0.16
SQLE-201ENST00000265896 TCEANCQ8N8B7 351 aa16.06■□□□□ 0.16
SQLE-201ENST00000265896 ASPNQ9BXN1 380 aa16.06■□□□□ 0.16
SQLE-201ENST00000265896 GABARAPL3Q9BY60 117 aa16.06■□□□□ 0.16
SQLE-201ENST00000265896 GLOD5A6NK44 160 aa16.05■□□□□ 0.16
SQLE-201ENST00000265896 AGAP14A8MT82 685 aa16.05■□□□□ 0.16
SQLE-201ENST00000265896 FFAR1O14842 300 aa16.05■□□□□ 0.16
SQLE-201ENST00000265896 HAT1O14929 419 aa16.05■□□□□ 0.16
SQLE-201ENST00000265896 PPM1DO15297 605 aa16.05■□□□□ 0.16
SQLE-201ENST00000265896 SEMA7AO75326 666 aa16.05■□□□□ 0.16
SQLE-201ENST00000265896 ABLIM3O94929 683 aa16.05■□□□□ 0.16
SQLE-201ENST00000265896 RPLP2P05387 115 aaKnown RBP16.05■□□□□ 0.16
SQLE-201ENST00000265896 CBSLP0DN79 551 aa16.05■□□□□ 0.16
SQLE-201ENST00000265896 XPAP23025 273 aaPredicted RBP16.05■□□□□ 0.16
SQLE-201ENST00000265896 TIA1P31483 386 aaKnown RBP eCLIP16.05■□□□□ 0.163e-6■■□□□ 12.1
SQLE-201ENST00000265896 CBSP35520 551 aa16.05■□□□□ 0.16
SQLE-201ENST00000265896 UBE3AQ05086 875 aa16.05■□□□□ 0.16
SQLE-201ENST00000265896 PUM1Q14671 1186 aaKnown RBP eCLIP16.05■□□□□ 0.16
SQLE-201ENST00000265896 GGTA1PQ4G0N0 100 aa16.05■□□□□ 0.16
SQLE-201ENST00000265896 SYT14Q8NB59 555 aa16.05■□□□□ 0.16
SQLE-201ENST00000265896 C2orf15Q8WU43 125 aaKnown RBP16.05■□□□□ 0.16
SQLE-201ENST00000265896 MRPS31Q92665 395 aaKnown RBP16.05■□□□□ 0.16
SQLE-201ENST00000265896 ZNF486Q96H40 463 aaPredicted RBP16.05■□□□□ 0.16
SQLE-201ENST00000265896 SLC46A2Q9BY10 475 aa16.05■□□□□ 0.16
SQLE-201ENST00000265896 RMI1Q9H9A7 625 aa16.05■□□□□ 0.16
SQLE-201ENST00000265896 SCN5AQ14524 2016 aa16.05■□□□□ 0.16
SQLE-201ENST00000265896 LEFTY2O00292 366 aa16.05■□□□□ 0.16
SQLE-201ENST00000265896 PLD2O14939 933 aa16.05■□□□□ 0.16
SQLE-201ENST00000265896 PRKRAO75569 313 aaKnown RBP16.05■□□□□ 0.16
SQLE-201ENST00000265896 KRT8P05787 483 aa16.05■□□□□ 0.16
SQLE-201ENST00000265896 SLC15A1P46059 708 aa16.05■□□□□ 0.16
SQLE-201ENST00000265896 PIN1Q13526 163 aaPredicted RBP16.05■□□□□ 0.16
SQLE-201ENST00000265896 VEZF1Q14119 521 aa16.05■□□□□ 0.16
SQLE-201ENST00000265896 DNAJB8Q8NHS0 232 aa16.05■□□□□ 0.16
SQLE-201ENST00000265896 HHIPQ96QV1 700 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms