RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 ARSFP54793 590 aa17.36■□□□□ 0.37
COL5A3-201ENST00000264828 IRF5Q13568 498 aa17.36■□□□□ 0.37
COL5A3-201ENST00000264828 AGTRAPQ6RW13 159 aa17.36■□□□□ 0.37
COL5A3-201ENST00000264828 TMEM110Q86TL2 294 aa17.36■□□□□ 0.37
COL5A3-201ENST00000264828 DEFB119Q8N690 84 aa17.36■□□□□ 0.37
COL5A3-201ENST00000264828 SLC6A7Q99884 636 aa17.36■□□□□ 0.37
COL5A3-201ENST00000264828 METTL7AQ9H8H3 244 aa17.36■□□□□ 0.37
COL5A3-201ENST00000264828 ENY2Q9NPA8 101 aa17.36■□□□□ 0.37
COL5A3-201ENST00000264828 PADI2Q9Y2J8 665 aa17.36■□□□□ 0.37
COL5A3-201ENST00000264828 YARS2Q9Y2Z4 477 aaKnown RBP17.36■□□□□ 0.37
COL5A3-201ENST00000264828 SPEF2Q9C093 1822 aa17.36■□□□□ 0.37
COL5A3-201ENST00000264828 GP1BBP13224 206 aa17.36■□□□□ 0.37
COL5A3-201ENST00000264828 GLP1RP43220 463 aa17.36■□□□□ 0.37
COL5A3-201ENST00000264828 TLE2Q04725 743 aa17.36■□□□□ 0.37
COL5A3-201ENST00000264828 ARHGAP40Q5TG30 622 aa17.36■□□□□ 0.37
COL5A3-201ENST00000264828 Q8N9G6 341 aaPredicted RBP17.36■□□□□ 0.37
COL5A3-201ENST00000264828 OR2AP1Q8NGE2 309 aa17.36■□□□□ 0.37
COL5A3-201ENST00000264828 PCDH10Q9P2E7 1040 aa17.36■□□□□ 0.37
COL5A3-201ENST00000264828 INMT-MINDY4F8WBC2 141 aa17.36■□□□□ 0.37
COL5A3-201ENST00000264828 H0YGN5 161 aa17.36■□□□□ 0.37
COL5A3-201ENST00000264828 GTF2F2P13984 249 aa17.36■□□□□ 0.37
COL5A3-201ENST00000264828 HSD3B2P26439 372 aa17.36■□□□□ 0.37
COL5A3-201ENST00000264828 CCND3P30281 292 aaPredicted RBP17.36■□□□□ 0.37
COL5A3-201ENST00000264828 MLIPQ5VWP3 458 aa17.36■□□□□ 0.37
COL5A3-201ENST00000264828 MTFR2Q6P444 385 aa17.36■□□□□ 0.37
COL5A3-201ENST00000264828 GATSQ8NAP1 163 aa17.36■□□□□ 0.37
COL5A3-201ENST00000264828 MSLNLQ96KJ4 702 aa17.36■□□□□ 0.37
COL5A3-201ENST00000264828 SLC39A1Q9NY26 324 aa17.36■□□□□ 0.37
COL5A3-201ENST00000264828 CDH10Q9Y6N8 788 aa17.36■□□□□ 0.37
COL5A3-201ENST00000264828 AOC2O75106 756 aa17.36■□□□□ 0.37
COL5A3-201ENST00000264828 CFIP05156 583 aa17.36■□□□□ 0.37
COL5A3-201ENST00000264828 SPARCP09486 303 aa17.36■□□□□ 0.37
COL5A3-201ENST00000264828 NFE2L1Q14494 772 aa17.36■□□□□ 0.37
COL5A3-201ENST00000264828 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.36■□□□□ 0.37
COL5A3-201ENST00000264828 TMIGD1Q6UXZ0 262 aa17.36■□□□□ 0.37
COL5A3-201ENST00000264828 TFGQ92734 400 aaPredicted RBP17.36■□□□□ 0.37
COL5A3-201ENST00000264828 C7orf34Q96L11 122 aa17.36■□□□□ 0.37
COL5A3-201ENST00000264828 NLGN3Q9NZ94 848 aa17.36■□□□□ 0.37
COL5A3-201ENST00000264828 C11orf98E9PRG8 122 aa17.35■□□□□ 0.37
COL5A3-201ENST00000264828 FECHP22830 423 aa17.35■□□□□ 0.37
COL5A3-201ENST00000264828 ST3GAL4Q11206 333 aa17.35■□□□□ 0.37
COL5A3-201ENST00000264828 CDK10Q15131 360 aa17.35■□□□□ 0.37
COL5A3-201ENST00000264828 PPP2R2DQ66LE6 453 aa17.35■□□□□ 0.37
COL5A3-201ENST00000264828 NOXRED1Q6NXP6 359 aa17.35■□□□□ 0.37
COL5A3-201ENST00000264828 TXNDC5Q8NBS9 432 aaKnown RBP17.35■□□□□ 0.37
COL5A3-201ENST00000264828 OR6N1Q8NGY5 312 aa17.35■□□□□ 0.37
COL5A3-201ENST00000264828 NSMAFQ92636 917 aa17.35■□□□□ 0.37
COL5A3-201ENST00000264828 PEBP4Q96S96 227 aa17.35■□□□□ 0.37
COL5A3-201ENST00000264828 TAS2R3Q9NYW6 316 aa17.35■□□□□ 0.37
COL5A3-201ENST00000264828 SCP2D1Q9UJQ7 156 aa17.35■□□□□ 0.37
COL5A3-201ENST00000264828 PCDHGB6Q9Y5F9 930 aa17.35■□□□□ 0.37
COL5A3-201ENST00000264828 MAPK3P27361 379 aaPredicted RBP17.35■□□□□ 0.37
COL5A3-201ENST00000264828 UBE2Q1Q7Z7E8 422 aa17.35■□□□□ 0.37
COL5A3-201ENST00000264828 C2CD4AQ8NCU7 369 aaPredicted RBP17.35■□□□□ 0.37
COL5A3-201ENST00000264828 MOCOSQ96EN8 888 aa17.35■□□□□ 0.37
COL5A3-201ENST00000264828 GDI1P31150 447 aa17.35■□□□□ 0.37
COL5A3-201ENST00000264828 SLC18A1P54219 525 aa17.35■□□□□ 0.37
COL5A3-201ENST00000264828 SMPDL3AQ92484 453 aa17.35■□□□□ 0.37
COL5A3-201ENST00000264828 KIAA1191Q96A73 305 aa17.35■□□□□ 0.37
COL5A3-201ENST00000264828 BORCS8Q96FH0 119 aa17.35■□□□□ 0.37
COL5A3-201ENST00000264828 UBQLN2Q9UHD9 624 aa17.35■□□□□ 0.37
COL5A3-201ENST00000264828 ZFR2Q9UPR6 939 aaKnown RBP17.35■□□□□ 0.37
COL5A3-201ENST00000264828 DLGAP4Q9Y2H0 992 aa17.35■□□□□ 0.37
COL5A3-201ENST00000264828 CLCA1A8K7I4 914 aa17.35■□□□□ 0.37
COL5A3-201ENST00000264828 NDUFS1P28331 727 aa17.35■□□□□ 0.37
COL5A3-201ENST00000264828 STC1P52823 247 aa17.35■□□□□ 0.37
COL5A3-201ENST00000264828 CLRN1P58418 232 aa17.35■□□□□ 0.37
COL5A3-201ENST00000264828 TAS2R43P59537 309 aa17.35■□□□□ 0.37
COL5A3-201ENST00000264828 GINS1Q14691 196 aa17.35■□□□□ 0.37
COL5A3-201ENST00000264828 C17orf62Q9BQA9 187 aa17.35■□□□□ 0.37
COL5A3-201ENST00000264828 CCDC106Q9BWC9 280 aa17.35■□□□□ 0.37
COL5A3-201ENST00000264828 SMG9Q9H0W8 520 aaKnown RBP17.35■□□□□ 0.37
COL5A3-201ENST00000264828 ATG5Q9H1Y0 275 aa17.35■□□□□ 0.37
COL5A3-201ENST00000264828 KCNN3Q9UGI6 736 aa17.35■□□□□ 0.37
COL5A3-201ENST00000264828 NFKBIEO00221 500 aa17.35■□□□□ 0.37
COL5A3-201ENST00000264828 SOX1O00570 391 aaPredicted RBP17.35■□□□□ 0.37
COL5A3-201ENST00000264828 TOXO94900 526 aa17.35■□□□□ 0.37
COL5A3-201ENST00000264828 FGF3P11487 239 aaPredicted RBP17.35■□□□□ 0.37
COL5A3-201ENST00000264828 DIO3P55073 304 aa17.35■□□□□ 0.37
COL5A3-201ENST00000264828 BRAT1Q6PJG6 821 aa17.35■□□□□ 0.37
COL5A3-201ENST00000264828 BRI3BPQ8WY22 251 aa17.35■□□□□ 0.37
COL5A3-201ENST00000264828 FAXDC2Q96IV6 333 aa17.35■□□□□ 0.37
COL5A3-201ENST00000264828 TMEM185BQ9H7F4 350 aa17.35■□□□□ 0.37
COL5A3-201ENST00000264828 MRPL15Q9P015 296 aaKnown RBP17.35■□□□□ 0.37
COL5A3-201ENST00000264828 KCTD13Q8WZ19 329 aa17.34■□□□□ 0.37
COL5A3-201ENST00000264828 NTPCRQ9BSD7 190 aaKnown RBP17.34■□□□□ 0.37
COL5A3-201ENST00000264828 CDC14AQ9UNH5 594 aa17.34■□□□□ 0.37
COL5A3-201ENST00000264828 MGAT4BQ9UQ53 548 aa17.34■□□□□ 0.37
COL5A3-201ENST00000264828 CD8B2A6NJW9 211 aa17.34■□□□□ 0.37
COL5A3-201ENST00000264828 UPK3BL1B0FP48 263 aa17.34■□□□□ 0.37
COL5A3-201ENST00000264828 UPK3BL2E5RIL1 263 aa17.34■□□□□ 0.37
COL5A3-201ENST00000264828 CD8BP10966 210 aa17.34■□□□□ 0.37
COL5A3-201ENST00000264828 AGXTP21549 392 aa17.34■□□□□ 0.37
COL5A3-201ENST00000264828 ARHGAP1Q07960 439 aa17.34■□□□□ 0.37
COL5A3-201ENST00000264828 EXOC3L2Q2M3D2 409 aa17.34■□□□□ 0.37
COL5A3-201ENST00000264828 ZNF648Q5T619 568 aaPredicted RBP17.34■□□□□ 0.37
COL5A3-201ENST00000264828 NANOGP8Q6NSW7 305 aa17.34■□□□□ 0.37
COL5A3-201ENST00000264828 ZNF367Q7RTV3 350 aa17.34■□□□□ 0.37
COL5A3-201ENST00000264828 MINDY3Q9H8M7 445 aa17.34■□□□□ 0.37
COL5A3-201ENST00000264828 NANOGQ9H9S0 305 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms