RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 RAP1GDS1P52306 607 aa17.35■□□□□ 0.37
SDF4-201ENST00000263741 SLC18A1P54219 525 aa17.35■□□□□ 0.37
SDF4-201ENST00000263741 IL10RAQ13651 578 aa17.35■□□□□ 0.37
SDF4-201ENST00000263741 ERV3-1Q14264 604 aa17.35■□□□□ 0.37
SDF4-201ENST00000263741 NKG7Q16617 165 aa17.35■□□□□ 0.37
SDF4-201ENST00000263741 SH2D4BQ5SQS7 431 aa17.35■□□□□ 0.37
SDF4-201ENST00000263741 OVCH1Q7RTY7 1134 aa17.35■□□□□ 0.37
SDF4-201ENST00000263741 PEX11GQ96HA9 241 aa17.35■□□□□ 0.37
SDF4-201ENST00000263741 FAR2Q96K12 515 aa17.35■□□□□ 0.37
SDF4-201ENST00000263741 MESP1Q9BRJ9 268 aa17.35■□□□□ 0.37
SDF4-201ENST00000263741 TRMOQ9BU70 441 aa17.35■□□□□ 0.37
SDF4-201ENST00000263741 MRPL1Q9BYD6 325 aaKnown RBP17.35■□□□□ 0.37
SDF4-201ENST00000263741 FGFR1OP2Q9NVK5 253 aa17.35■□□□□ 0.37
SDF4-201ENST00000263741 ARL2BPQ9Y2Y0 163 aa17.35■□□□□ 0.37
SDF4-201ENST00000263741 PTRH2Q9Y3E5 179 aaKnown RBP17.35■□□□□ 0.37
SDF4-201ENST00000263741 C21orf140B9A014 251 aa17.34■□□□□ 0.37
SDF4-201ENST00000263741 CDC123O75794 336 aaPredicted RBP17.34■□□□□ 0.37
SDF4-201ENST00000263741 HSPA4LO95757 839 aa17.34■□□□□ 0.37
SDF4-201ENST00000263741 KRT6AP02538 564 aa17.34■□□□□ 0.37
SDF4-201ENST00000263741 GBAP04062 536 aa17.34■□□□□ 0.37
SDF4-201ENST00000263741 KRT6BP04259 564 aa17.34■□□□□ 0.37
SDF4-201ENST00000263741 PRKAR1AP10644 381 aa17.34■□□□□ 0.37
SDF4-201ENST00000263741 PTPN4P29074 926 aa17.34■□□□□ 0.37
SDF4-201ENST00000263741 SSR2P43308 183 aa17.34■□□□□ 0.37
SDF4-201ENST00000263741 KRT6CP48668 564 aa17.34■□□□□ 0.37
SDF4-201ENST00000263741 EFNA3P52797 238 aa17.34■□□□□ 0.37
SDF4-201ENST00000263741 RPS15P62841 145 aaKnown RBP17.34■□□□□ 0.37
SDF4-201ENST00000263741 HMGCS1Q01581 520 aa17.34■□□□□ 0.37
SDF4-201ENST00000263741 BST1Q10588 318 aa17.34■□□□□ 0.37
SDF4-201ENST00000263741 DEPDC1Q5TB30 811 aa17.34■□□□□ 0.37
SDF4-201ENST00000263741 SPATA21Q7Z572 469 aa17.34■□□□□ 0.37
SDF4-201ENST00000263741 LAPTM4BQ86VI4 370 aa17.34■□□□□ 0.37
SDF4-201ENST00000263741 OR51Q1Q8NH59 317 aa17.34■□□□□ 0.37
SDF4-201ENST00000263741 STT3BQ8TCJ2 826 aa17.34■□□□□ 0.37
SDF4-201ENST00000263741 MAGEB10Q96LZ2 347 aaPredicted RBP17.34■□□□□ 0.37
SDF4-201ENST00000263741 MAGEB18Q96M61 343 aa17.34■□□□□ 0.37
SDF4-201ENST00000263741 QRFPRQ96P65 431 aa17.34■□□□□ 0.37
SDF4-201ENST00000263741 SPSB2Q99619 263 aa17.34■□□□□ 0.37
SDF4-201ENST00000263741 COPS7BQ9H9Q2 264 aaPredicted RBP17.34■□□□□ 0.37
SDF4-201ENST00000263741 PRDM7Q9NQW5 492 aa17.34■□□□□ 0.37
SDF4-201ENST00000263741 ADGRE2Q9UHX3 823 aa17.34■□□□□ 0.37
SDF4-201ENST00000263741 TCFL5Q9UL49 500 aa17.34■□□□□ 0.37
SDF4-201ENST00000263741 FARSAQ9Y285 508 aaKnown RBP17.34■□□□□ 0.37
SDF4-201ENST00000263741 MAP4K5Q9Y4K4 846 aa17.34■□□□□ 0.37
SDF4-201ENST00000263741 H0YIG0 161 aa17.33■□□□□ 0.37
SDF4-201ENST00000263741 FOXE1O00358 373 aaPredicted RBP17.33■□□□□ 0.37
SDF4-201ENST00000263741 MGRN1O60291 552 aa17.33■□□□□ 0.37
SDF4-201ENST00000263741 KLF7O75840 302 aaPredicted RBP17.33■□□□□ 0.37
SDF4-201ENST00000263741 XCR1P46094 333 aa17.33■□□□□ 0.37
SDF4-201ENST00000263741 NAA20P61599 178 aa17.33■□□□□ 0.37
SDF4-201ENST00000263741 CHSY3Q70JA7 882 aa17.33■□□□□ 0.37
SDF4-201ENST00000263741 ZC3H7AQ8IWR0 971 aaKnown RBP17.33■□□□□ 0.37
SDF4-201ENST00000263741 FKBP10Q96AY3 582 aa17.33■□□□□ 0.37
SDF4-201ENST00000263741 KCNC2Q96PR1 638 aa17.33■□□□□ 0.37
SDF4-201ENST00000263741 ZNF717Q9BY31 904 aaPredicted RBP17.33■□□□□ 0.37
SDF4-201ENST00000263741 ACPTQ9BZG2 426 aa17.33■□□□□ 0.37
SDF4-201ENST00000263741 ZNF282Q9UDV7 671 aaPredicted RBP17.33■□□□□ 0.37
SDF4-201ENST00000263741 MED13Q9UHV7 2174 aa17.33■□□□□ 0.36
SDF4-201ENST00000263741 AZIN1O14977 448 aa17.33■□□□□ 0.36
SDF4-201ENST00000263741 NKX2-8O15522 239 aa17.33■□□□□ 0.36
SDF4-201ENST00000263741 CHST10O43529 356 aa17.33■□□□□ 0.36
SDF4-201ENST00000263741 ULK1O75385 1050 aa17.33■□□□□ 0.36
SDF4-201ENST00000263741 ONECUT2O95948 504 aa17.33■□□□□ 0.36
SDF4-201ENST00000263741 RUNX2Q13950 521 aa17.33■□□□□ 0.36
SDF4-201ENST00000263741 KANK2Q63ZY3 851 aa17.33■□□□□ 0.36
SDF4-201ENST00000263741 ZDHHC2Q9UIJ5 367 aa17.33■□□□□ 0.36
SDF4-201ENST00000263741 KCND3Q9UK17 655 aa17.33■□□□□ 0.36
SDF4-201ENST00000263741 SSUH2Q9Y2M2 353 aa17.33■□□□□ 0.36
SDF4-201ENST00000263741 CROCCQ5TZA2 2017 aa17.32■□□□□ 0.36
SDF4-201ENST00000263741 EEDO75530 441 aaKnown RBP17.32■□□□□ 0.36
SDF4-201ENST00000263741 FURINP09958 794 aa17.32■□□□□ 0.36
SDF4-201ENST00000263741 ZGLP1P0C6A0 271 aa17.32■□□□□ 0.36
SDF4-201ENST00000263741 PIM1P11309 404 aaPredicted RBP17.32■□□□□ 0.36
SDF4-201ENST00000263741 PTX3P26022 381 aaPredicted RBP17.32■□□□□ 0.36
SDF4-201ENST00000263741 SLC1A6P48664 564 aa17.32■□□□□ 0.36
SDF4-201ENST00000263741 ABCE1P61221 599 aaKnown RBP17.32■□□□□ 0.36
SDF4-201ENST00000263741 ELF3P78545 371 aaPredicted RBP17.32■□□□□ 0.36
SDF4-201ENST00000263741 TMEM35AQ53FP2 167 aa17.32■□□□□ 0.36
SDF4-201ENST00000263741 CCDC81Q6ZN84 652 aa17.32■□□□□ 0.36
SDF4-201ENST00000263741 CA13Q8N1Q1 262 aa17.32■□□□□ 0.36
SDF4-201ENST00000263741 ZNF781Q8N8C0 355 aa17.32■□□□□ 0.36
SDF4-201ENST00000263741 SORT1Q99523 831 aa17.32■□□□□ 0.36
SDF4-201ENST00000263741 EML4Q9HC35 981 aaKnown RBP17.32■□□□□ 0.36
SDF4-201ENST00000263741 FAM227AF5H4B4 570 aa17.32■□□□□ 0.36
SDF4-201ENST00000263741 UMODP07911 640 aa17.32■□□□□ 0.36
SDF4-201ENST00000263741 RAB40ALP0C0E4 278 aa17.32■□□□□ 0.36
SDF4-201ENST00000263741 UROSP10746 265 aa17.32■□□□□ 0.36
SDF4-201ENST00000263741 ATP5A1P25705 553 aaKnown RBP17.32■□□□□ 0.36
SDF4-201ENST00000263741 OCA2Q04671 838 aa17.32■□□□□ 0.36
SDF4-201ENST00000263741 KLC1Q07866 573 aa17.32■□□□□ 0.36
SDF4-201ENST00000263741 STX3Q13277 289 aa17.32■□□□□ 0.36
SDF4-201ENST00000263741 MFSD4BQ5TF39 518 aa17.32■□□□□ 0.36
SDF4-201ENST00000263741 BROXQ5VW32 411 aa17.32■□□□□ 0.36
SDF4-201ENST00000263741 C19orf48Q6RUI8 117 aa17.32■□□□□ 0.36
SDF4-201ENST00000263741 ACOT4Q8N9L9 421 aa17.32■□□□□ 0.36
SDF4-201ENST00000263741 RGMAQ96B86 450 aa17.32■□□□□ 0.36
SDF4-201ENST00000263741 MIEF2Q96C03 454 aa17.32■□□□□ 0.36
SDF4-201ENST00000263741 SLC45A3Q96JT2 553 aa17.32■□□□□ 0.36
SDF4-201ENST00000263741 CSF3RQ99062 836 aa17.32■□□□□ 0.36
SDF4-201ENST00000263741 SERPINI1Q99574 410 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms