RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 TTKP33981 857 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 YAP1P46937 504 aaKnown RBP12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 CASP9P55211 416 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 SELENOWP63302 87 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 SCARB2Q14108 478 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 ELOAQ14241 798 aaKnown RBP12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 CLCA4Q14CN2 919 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 ZNF630Q2M218 657 aaPredicted RBP12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 CWF19L1Q69YN2 538 aaKnown RBP12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 CEP68Q76N32 757 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 RNF130Q86XS8 419 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 MMP21Q8N119 569 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 TTLQ8NG68 377 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 OR5AK3PQ8NH89 298 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 TM4SF18Q96CE8 201 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 MYOCQ99972 504 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 NLNQ9BYT8 704 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 ADNPQ9H2P0 1102 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 C1GALT1Q9NS00 363 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 ACSL6Q9UKU0 697 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 PADI2Q9Y2J8 665 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 MAP4K5Q9Y4K4 846 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 PCDHGA8Q9Y5G5 932 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 TRBC2A0A5B9 178 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 PRR19A6NJB7 356 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 CLEC3AO75596 197 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 GRK3P35626 688 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 ALDH9A1P49189 494 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 RPS6KA3P51812 740 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 CRYBA2P53672 197 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 TOP3AQ13472 1001 aaPredicted RBP12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 SLC5A12Q1EHB4 618 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 ZNF773Q6PK81 442 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 KCTD8Q6ZWB6 473 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 SLC30A8Q8IWU4 369 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 ADGRF3Q8IZF5 1079 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 PIK3C3Q8NEB9 887 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 OR52E1Q8NGJ3 308 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 OR2A1Q8NGT9 310 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 NFKBIDQ8NI38 313 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 ASB12Q8WXK4 309 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 LZICQ8WZA0 190 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 SIPA1Q96FS4 1042 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 SCARF2Q96GP6 870 aaPredicted RBP12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 MRPS30Q9NP92 439 aaKnown RBP12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 CLDND1Q9NY35 253 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 PDP1Q9P0J1 537 aaPredicted RBP12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 KIF17Q9P2E2 1029 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 BLOC1S6Q9UL45 172 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 SNX8Q9Y5X2 465 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 HEBP2Q9Y5Z4 205 aa12.34□□□□□ -0.43
SPTLC1-201ENST00000262554 OR52A4PA6NMU1 304 aa12.33□□□□□ -0.44
SPTLC1-201ENST00000262554 ANHXE9PGG2 379 aa12.33□□□□□ -0.44
SPTLC1-201ENST00000262554 BCKDKO14874 412 aa12.33□□□□□ -0.44
SPTLC1-201ENST00000262554 PDPK1O15530 556 aa12.33□□□□□ -0.44
SPTLC1-201ENST00000262554 LCMT2O60294 686 aaKnown RBP12.33□□□□□ -0.44
SPTLC1-201ENST00000262554 GCM2O75603 506 aaPredicted RBP12.33□□□□□ -0.44
SPTLC1-201ENST00000262554 IFNA14P01570 189 aa12.33□□□□□ -0.44
SPTLC1-201ENST00000262554 SERPIND1P05546 499 aa12.33□□□□□ -0.44
SPTLC1-201ENST00000262554 ACADMP11310 421 aa12.33□□□□□ -0.44
SPTLC1-201ENST00000262554 MANFP55145 182 aaKnown RBP12.33□□□□□ -0.44
SPTLC1-201ENST00000262554 PPP2CBP62714 309 aa12.33□□□□□ -0.44
SPTLC1-201ENST00000262554 PPP2CAP67775 309 aa12.33□□□□□ -0.44
SPTLC1-201ENST00000262554 CDK6Q00534 326 aa12.33□□□□□ -0.44
SPTLC1-201ENST00000262554 SFSWAPQ12872 951 aaKnown RBP12.33□□□□□ -0.44
SPTLC1-201ENST00000262554 DYNC1I2Q13409 638 aaKnown RBP12.33□□□□□ -0.44
SPTLC1-201ENST00000262554 RPE65Q16518 533 aa12.33□□□□□ -0.44
SPTLC1-201ENST00000262554 C6orf141Q5SZD1 244 aa12.33□□□□□ -0.44
SPTLC1-201ENST00000262554 ZNF691Q5VV52 312 aa12.33□□□□□ -0.44
SPTLC1-201ENST00000262554 BROXQ5VW32 411 aa12.33□□□□□ -0.44
SPTLC1-201ENST00000262554 KDM4DQ6B0I6 523 aa12.33□□□□□ -0.44
SPTLC1-201ENST00000262554 USP30Q70CQ3 517 aa12.33□□□□□ -0.44
SPTLC1-201ENST00000262554 CCDC80Q76M96 950 aa12.33□□□□□ -0.44
SPTLC1-201ENST00000262554 GALNT5Q7Z7M9 940 aa12.33□□□□□ -0.44
SPTLC1-201ENST00000262554 FAM124AQ86V42 546 aa12.33□□□□□ -0.44
SPTLC1-201ENST00000262554 CYP4Z1Q86W10 505 aa12.33□□□□□ -0.44
SPTLC1-201ENST00000262554 ZC3H7AQ8IWR0 971 aaKnown RBP12.33□□□□□ -0.44
SPTLC1-201ENST00000262554 SETD9Q8NE22 299 aa12.33□□□□□ -0.44
SPTLC1-201ENST00000262554 CHDHQ8NE62 594 aaPredicted RBP12.33□□□□□ -0.44
SPTLC1-201ENST00000262554 SPPL2AQ8TCT8 520 aa12.33□□□□□ -0.44
SPTLC1-201ENST00000262554 OR5P2Q8WZ92 322 aa12.33□□□□□ -0.44
SPTLC1-201ENST00000262554 C7orf34Q96L11 122 aa12.33□□□□□ -0.44
SPTLC1-201ENST00000262554 EPYCQ99645 322 aa12.33□□□□□ -0.44
SPTLC1-201ENST00000262554 BARD1Q99728 777 aaKnown RBP12.33□□□□□ -0.44
SPTLC1-201ENST00000262554 RUBCNLQ9H714 662 aa12.33□□□□□ -0.44
SPTLC1-201ENST00000262554 POLR1BQ9H9Y6 1135 aa12.33□□□□□ -0.44
SPTLC1-201ENST00000262554 LHX9Q9NQ69 397 aa12.33□□□□□ -0.44
SPTLC1-201ENST00000262554 PRDM8Q9NQV8 689 aa12.33□□□□□ -0.44
SPTLC1-201ENST00000262554 ANGPT4Q9Y264 503 aa12.33□□□□□ -0.44
SPTLC1-201ENST00000262554 CDH23Q9H251 3354 aa12.33□□□□□ -0.44
SPTLC1-201ENST00000262554 IGKV1-8A0A0C4DH67 115 aa12.32□□□□□ -0.44
SPTLC1-201ENST00000262554 PRSS38A1L453 326 aa12.32□□□□□ -0.44
SPTLC1-201ENST00000262554 MITFO75030 526 aaPredicted RBP12.32□□□□□ -0.44
SPTLC1-201ENST00000262554 C9P02748 559 aa12.32□□□□□ -0.44
SPTLC1-201ENST00000262554 HOXC4P09017 264 aaPredicted RBP12.32□□□□□ -0.44
SPTLC1-201ENST00000262554 CRHBPP24387 322 aa12.32□□□□□ -0.44
SPTLC1-201ENST00000262554 SLC5A2P31639 672 aa12.32□□□□□ -0.44
SPTLC1-201ENST00000262554 RYKP34925 604 aa12.32□□□□□ -0.44
SPTLC1-201ENST00000262554 DAPP51397 102 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms