RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 SLC5A12Q1EHB4 618 aa12.45□□□□□ -0.42
SNX1-201ENST00000261889 ADGRF1Q5T601 910 aa12.45□□□□□ -0.42
SNX1-201ENST00000261889 KIAA1841Q6NSI8 718 aa12.45□□□□□ -0.42
SNX1-201ENST00000261889 CRTC1Q6UUV9 634 aa12.45□□□□□ -0.42
SNX1-201ENST00000261889 RFPL4BQ6ZWI9 263 aa12.45□□□□□ -0.42
SNX1-201ENST00000261889 TIGD4Q8IY51 512 aa12.45□□□□□ -0.42
SNX1-201ENST00000261889 ELMOD1Q8N336 334 aa12.45□□□□□ -0.42
SNX1-201ENST00000261889 CHST14Q8NCH0 376 aa12.45□□□□□ -0.42
SNX1-201ENST00000261889 ASB15Q8WXK1 588 aa12.45□□□□□ -0.42
SNX1-201ENST00000261889 RNF31Q96EP0 1072 aa12.45□□□□□ -0.42
SNX1-201ENST00000261889 DIRAS2Q96HU8 199 aa12.45□□□□□ -0.42
SNX1-201ENST00000261889 SLC35A5Q9BS91 424 aa12.45□□□□□ -0.42
SNX1-201ENST00000261889 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.45□□□□□ -0.42
SNX1-201ENST00000261889 SP140LQ9H930 580 aa12.45□□□□□ -0.42
SNX1-201ENST00000261889 TVP23BQ9NYZ1 205 aa12.45□□□□□ -0.42
SNX1-201ENST00000261889 ERVH48-1M5A8F1 160 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 SCAMP1O15126 338 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 SLC16A8O95907 504 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 CCNYL3P0C7X3 344 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 CHMP24386 653 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 APEX1P27695 318 aaKnown RBP12.44□□□□□ -0.42
SNX1-201ENST00000261889 MAP4K2Q12851 820 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 VEPH1Q14D04 833 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 PYDC2Q56P42 97 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 FAHD1Q6P587 224 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 TMPRSS11AQ6ZMR5 421 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 Q6ZVL8 140 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 CMTM8Q8IZV2 173 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 ZNF557Q8N988 423 aaPredicted RBP12.44□□□□□ -0.42
SNX1-201ENST00000261889 DBF4BQ8NFT6 615 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 KBTBD8Q8NFY9 601 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 DOK4Q8TEW6 326 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 NTMT1Q9BV86 223 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 C11orf54Q9H0W9 315 aaPredicted RBP12.44□□□□□ -0.42
SNX1-201ENST00000261889 RPRD1BQ9NQG5 326 aaKnown RBP12.44□□□□□ -0.42
SNX1-201ENST00000261889 VPS29Q9UBQ0 182 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 PCDHGA2Q9Y5H1 932 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 VWA8A3KMH1 1905 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 TBKBP1A7MCY6 615 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 OR10H3O60404 316 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 IL7P13232 177 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 SOX6P35712 828 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 HTR2BP41595 481 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 MLLT1Q03111 559 aaPredicted RBP12.44□□□□□ -0.42
SNX1-201ENST00000261889 IL18R1Q13478 541 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 CLEC12AQ5QGZ9 265 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 MTFR2Q6P444 385 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 IL17FQ96PD4 163 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 POLR2J2Q9GZM3 115 aaKnown RBP12.44□□□□□ -0.42
SNX1-201ENST00000261889 SPNS1Q9H2V7 528 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 BRD9Q9H8M2 597 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 ZNF556Q9HAH1 456 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 CCNB1IP1Q9NPC3 277 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 UCKL1Q9NWZ5 548 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 MARCH5Q9NX47 278 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 TRPS1Q9UHF7 1281 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 TMPRSS11EQ9UL52 423 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 A0A0X1KG70 313 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 PSKH1P11801 424 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 GALK2Q01415 458 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 SCARB2Q14108 478 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 SEC23BQ15437 767 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 ZC3H12BQ5HYM0 836 aaKnown RBP12.44□□□□□ -0.42
SNX1-201ENST00000261889 C1orf53Q5VUE5 145 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 ZNF438Q7Z4V0 828 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 FBXO22Q8NEZ5 403 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 HUS1BQ8NHY5 278 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 PEX13Q92968 403 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 OR4K3Q96R72 315 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 DOHHQ9BU89 302 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 RSPO3Q9BXY4 272 aaPredicted RBP12.44□□□□□ -0.42
SNX1-201ENST00000261889 HMX1Q9NP08 348 aaPredicted RBP12.44□□□□□ -0.42
SNX1-201ENST00000261889 ITM2BQ9Y287 266 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 PCDHGB3Q9Y5G1 929 aa12.44□□□□□ -0.42
SNX1-201ENST00000261889 FRS3O43559 492 aa12.43□□□□□ -0.42
SNX1-201ENST00000261889 PFN3P60673 137 aa12.43□□□□□ -0.42
SNX1-201ENST00000261889 TRIM71Q2Q1W2 868 aaKnown RBP12.43□□□□□ -0.42
SNX1-201ENST00000261889 TYW3Q6IPR3 259 aaKnown RBP12.43□□□□□ -0.42
SNX1-201ENST00000261889 Q6ZVU0 165 aa12.43□□□□□ -0.42
SNX1-201ENST00000261889 UBE2Q1Q7Z7E8 422 aa12.43□□□□□ -0.42
SNX1-201ENST00000261889 SCLYQ96I15 445 aa12.43□□□□□ -0.42
SNX1-201ENST00000261889 OPALINQ96PE5 141 aa12.43□□□□□ -0.42
SNX1-201ENST00000261889 DCLRE1CQ96SD1 692 aaKnown RBP12.43□□□□□ -0.42
SNX1-201ENST00000261889 ANKRA2Q9H9E1 313 aa12.43□□□□□ -0.42
SNX1-201ENST00000261889 NMNAT1Q9HAN9 279 aaPredicted RBP12.43□□□□□ -0.42
SNX1-201ENST00000261889 HHATLQ9HCP6 504 aa12.43□□□□□ -0.42
SNX1-201ENST00000261889 PCDHB1Q9Y5F3 818 aa12.43□□□□□ -0.42
SNX1-201ENST00000261889 GBF1Q92538 1859 aa12.43□□□□□ -0.42
SNX1-201ENST00000261889 SDK1Q7Z5N4 2213 aa12.43□□□□□ -0.42
SNX1-201ENST00000261889 CACNA1IQ9P0X4 2223 aa12.43□□□□□ -0.42
SNX1-201ENST00000261889 TRBC2A0A5B9 178 aa12.43□□□□□ -0.42
SNX1-201ENST00000261889 PSIP1O75475 530 aaKnown RBP12.43□□□□□ -0.42
SNX1-201ENST00000261889 CCNB2O95067 398 aa12.43□□□□□ -0.42
SNX1-201ENST00000261889 GADD45GO95257 159 aa12.43□□□□□ -0.42
SNX1-201ENST00000261889 PTTG1O95997 202 aa12.43□□□□□ -0.42
SNX1-201ENST00000261889 SYPP08247 313 aa12.43□□□□□ -0.42
SNX1-201ENST00000261889 HOXB9P17482 250 aaPredicted RBP12.43□□□□□ -0.42
SNX1-201ENST00000261889 ETV3P41162 512 aa12.43□□□□□ -0.42
SNX1-201ENST00000261889 CTSCP53634 463 aa12.43□□□□□ -0.42
SNX1-201ENST00000261889 CAMK2BQ13554 666 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms