RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 YIPF2Q9BWQ6 316 aa15.88■□□□□ 0.13
SDCBP-201ENST00000260130 C1QTNF3Q9BXJ4 246 aa15.88■□□□□ 0.13
SDCBP-201ENST00000260130 RHBGQ9H310 441 aa15.88■□□□□ 0.13
SDCBP-201ENST00000260130 NOL11Q9H8H0 719 aaKnown RBP15.88■□□□□ 0.13
SDCBP-201ENST00000260130 ACTR8Q9H981 624 aa15.88■□□□□ 0.13
SDCBP-201ENST00000260130 THAP1Q9NVV9 213 aa15.88■□□□□ 0.13
SDCBP-201ENST00000260130 TRPC4Q9UBN4 977 aa15.88■□□□□ 0.13
SDCBP-201ENST00000260130 NXT1Q9UKK6 140 aaKnown RBP15.88■□□□□ 0.13
SDCBP-201ENST00000260130 PCTPQ9UKL6 214 aa15.88■□□□□ 0.13
SDCBP-201ENST00000260130 EMCNQ9ULC0 261 aa15.88■□□□□ 0.13
SDCBP-201ENST00000260130 MAP4K5Q9Y4K4 846 aa15.88■□□□□ 0.13
SDCBP-201ENST00000260130 DLX3O60479 287 aa15.87■□□□□ 0.13
SDCBP-201ENST00000260130 UGDHO60701 494 aa15.87■□□□□ 0.13
SDCBP-201ENST00000260130 CLEC3AO75596 197 aa15.87■□□□□ 0.13
SDCBP-201ENST00000260130 ALOX12P18054 663 aa15.87■□□□□ 0.13
SDCBP-201ENST00000260130 HNF4AP41235 474 aa15.87■□□□□ 0.13
SDCBP-201ENST00000260130 FOXL2P58012 376 aa15.87■□□□□ 0.13
SDCBP-201ENST00000260130 TRMT5Q32P41 509 aaKnown RBP15.87■□□□□ 0.13
SDCBP-201ENST00000260130 CCDC153Q494R4 210 aa15.87■□□□□ 0.13
SDCBP-201ENST00000260130 GRHL2Q6ISB3 625 aa15.87■□□□□ 0.13
SDCBP-201ENST00000260130 MED27Q6P2C8 311 aa15.87■□□□□ 0.13
SDCBP-201ENST00000260130 ABHD13Q7L211 337 aa15.87■□□□□ 0.13
SDCBP-201ENST00000260130 MYLK4Q86YV6 388 aaPredicted RBP15.87■□□□□ 0.13
SDCBP-201ENST00000260130 SCUBE1Q8IWY4 988 aa15.87■□□□□ 0.13
SDCBP-201ENST00000260130 STT3BQ8TCJ2 826 aa15.87■□□□□ 0.13
SDCBP-201ENST00000260130 UTP15Q8TED0 518 aaKnown RBP15.87■□□□□ 0.13
SDCBP-201ENST00000260130 ATP6V1E2Q96A05 226 aa15.87■□□□□ 0.13
SDCBP-201ENST00000260130 SPSB2Q99619 263 aa15.87■□□□□ 0.13
SDCBP-201ENST00000260130 KLHL31Q9H511 634 aa15.87■□□□□ 0.13
SDCBP-201ENST00000260130 POLHQ9Y253 713 aa15.87■□□□□ 0.13
SDCBP-201ENST00000260130 NAALAD2Q9Y3Q0 740 aa15.87■□□□□ 0.13
SDCBP-201ENST00000260130 FER1L5A0AVI2 2057 aa15.87■□□□□ 0.13
SDCBP-201ENST00000260130 IGLV3-12A0A075B6K2 115 aa15.87■□□□□ 0.13
SDCBP-201ENST00000260130 DPPA5A6NC42 116 aa15.87■□□□□ 0.13
SDCBP-201ENST00000260130 SGK494L7N484 410 aa15.87■□□□□ 0.13
SDCBP-201ENST00000260130 RPS17P08708 135 aaKnown RBP15.87■□□□□ 0.13
SDCBP-201ENST00000260130 ZGLP1P0C6A0 271 aa15.87■□□□□ 0.13
SDCBP-201ENST00000260130 STXBP1P61764 594 aaKnown RBP15.87■□□□□ 0.13
SDCBP-201ENST00000260130 HERVK_113P63132 956 aa15.87■□□□□ 0.13
SDCBP-201ENST00000260130 TBR1Q16650 682 aa15.87■□□□□ 0.13
SDCBP-201ENST00000260130 DEFB109BQ30KR1 87 aa15.87■□□□□ 0.13
SDCBP-201ENST00000260130 VWA2Q5GFL6 755 aa15.87■□□□□ 0.13
SDCBP-201ENST00000260130 TMEM154Q6P9G4 183 aa15.87■□□□□ 0.13
SDCBP-201ENST00000260130 VN1R5Q7Z5H4 357 aa15.87■□□□□ 0.13
SDCBP-201ENST00000260130 PDSS2Q86YH6 399 aa15.87■□□□□ 0.13
SDCBP-201ENST00000260130 TREML1Q86YW5 311 aa15.87■□□□□ 0.13
SDCBP-201ENST00000260130 LAS2Q8IYD9 372 aa15.87■□□□□ 0.13
SDCBP-201ENST00000260130 PPP1R14CQ8TAE6 165 aa15.87■□□□□ 0.13
SDCBP-201ENST00000260130 ADAMTS17Q8TE56 1095 aa15.87■□□□□ 0.13
SDCBP-201ENST00000260130 NRG4Q8WWG1 115 aa15.87■□□□□ 0.13
SDCBP-201ENST00000260130 THAP4Q8WY91 577 aa15.87■□□□□ 0.13
SDCBP-201ENST00000260130 RILPQ96NA2 401 aa15.87■□□□□ 0.13
SDCBP-201ENST00000260130 NSUN5Q96P11 429 aaKnown RBP15.87■□□□□ 0.13
SDCBP-201ENST00000260130 ERVK-6Q9BXR3 956 aa15.87■□□□□ 0.13
SDCBP-201ENST00000260130 C1orf21Q9H246 121 aa15.87■□□□□ 0.13
SDCBP-201ENST00000260130 ZBTB26Q9HCK0 441 aa15.87■□□□□ 0.13
SDCBP-201ENST00000260130 MKKSQ9NPJ1 570 aaPredicted RBP15.87■□□□□ 0.13
SDCBP-201ENST00000260130 OR7A17O14581 309 aa15.86■□□□□ 0.13
SDCBP-201ENST00000260130 KLHL18O94889 574 aa15.86■□□□□ 0.13
SDCBP-201ENST00000260130 PROCP04070 461 aa15.86■□□□□ 0.13
SDCBP-201ENST00000260130 UMODP07911 640 aa15.86■□□□□ 0.13
SDCBP-201ENST00000260130 ZNF888P0CJ79 500 aaPredicted RBP15.86■□□□□ 0.13
SDCBP-201ENST00000260130 SMIM10L1P0DMW3 83 aa15.86■□□□□ 0.13
SDCBP-201ENST00000260130 CPA2P48052 419 aa15.86■□□□□ 0.13
SDCBP-201ENST00000260130 SKP1P63208 163 aa15.86■□□□□ 0.13
SDCBP-201ENST00000260130 MAT1AQ00266 395 aaKnown RBP15.86■□□□□ 0.13
SDCBP-201ENST00000260130 RCN2Q14257 317 aa15.86■□□□□ 0.13
SDCBP-201ENST00000260130 SYT16Q17RD7 645 aa15.86■□□□□ 0.13
SDCBP-201ENST00000260130 DEFB134Q4QY38 66 aa15.86■□□□□ 0.13
SDCBP-201ENST00000260130 TOR1AIP1Q5JTV8 583 aa15.86■□□□□ 0.13
SDCBP-201ENST00000260130 ADNP2Q6IQ32 1131 aa15.86■□□□□ 0.13
SDCBP-201ENST00000260130 NIPAL1Q6NVV3 410 aa15.86■□□□□ 0.13
SDCBP-201ENST00000260130 BORAQ6PGQ7 559 aa15.86■□□□□ 0.13
SDCBP-201ENST00000260130 SLC22A9Q8IVM8 553 aa15.86■□□□□ 0.13
SDCBP-201ENST00000260130 TMEM151BQ8IW70 566 aa15.86■□□□□ 0.13
SDCBP-201ENST00000260130 WDR75Q8IWA0 830 aaKnown RBP15.86■□□□□ 0.13
SDCBP-201ENST00000260130 RBM15BQ8NDT2 890 aaKnown RBP15.86■□□□□ 0.13
SDCBP-201ENST00000260130 OR7G3Q8NG95 312 aa15.86■□□□□ 0.13
SDCBP-201ENST00000260130 ZNF483Q8TF39 744 aaPredicted RBP15.86■□□□□ 0.13
SDCBP-201ENST00000260130 TTC9Q92623 222 aa15.86■□□□□ 0.13
SDCBP-201ENST00000260130 EXTL1Q92935 676 aa15.86■□□□□ 0.13
SDCBP-201ENST00000260130 SMIM10Q96HG1 83 aa15.86■□□□□ 0.13
SDCBP-201ENST00000260130 NTMT1Q9BV86 223 aa15.86■□□□□ 0.13
SDCBP-201ENST00000260130 CCDC106Q9BWC9 280 aa15.86■□□□□ 0.13
SDCBP-201ENST00000260130 SOX17Q9H6I2 414 aaPredicted RBP15.86■□□□□ 0.13
SDCBP-201ENST00000260130 PCDHGA11Q9Y5H2 935 aa15.86■□□□□ 0.13
SDCBP-201ENST00000260130 ATMQ13315 3056 aa15.86■□□□□ 0.13
SDCBP-201ENST00000260130 LRIT2A6NDA9 550 aa15.86■□□□□ 0.13
SDCBP-201ENST00000260130 FFAR3O14843 346 aa15.86■□□□□ 0.13
SDCBP-201ENST00000260130 GPR42O15529 346 aa15.86■□□□□ 0.13
SDCBP-201ENST00000260130 PLIN3O60664 434 aa15.86■□□□□ 0.13
SDCBP-201ENST00000260130 GALR3O60755 368 aaPredicted RBP15.86■□□□□ 0.13
SDCBP-201ENST00000260130 CLDN9O95484 217 aa15.86■□□□□ 0.13
SDCBP-201ENST00000260130 KITP10721 976 aa15.86■□□□□ 0.13
SDCBP-201ENST00000260130 IMPDH1P20839 514 aa15.86■□□□□ 0.13
SDCBP-201ENST00000260130 PRKAA2P54646 552 aa15.86■□□□□ 0.13
SDCBP-201ENST00000260130 RAB8AP61006 207 aa15.86■□□□□ 0.13
SDCBP-201ENST00000260130 MXRA7P84157 204 aa15.86■□□□□ 0.13
SDCBP-201ENST00000260130 ZNF678Q5SXM1 525 aa15.86■□□□□ 0.13
SDCBP-201ENST00000260130 SHISA6Q6ZSJ9 500 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms