RNA–Protein interactions for RNA: ENST00000259229.6

CCDC115-201, Transcript of coiled-coil domain containing 115, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC115, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-201ENST00000259229 C2orf80Q0P641 193 aa16.84■□□□□ 0.29
CCDC115-201ENST00000259229 SPEM2Q0P670 501 aa16.84■□□□□ 0.29
CCDC115-201ENST00000259229 ART3Q13508 389 aa16.84■□□□□ 0.29
CCDC115-201ENST00000259229 SUZ12Q15022 739 aaKnown RBP16.84■□□□□ 0.29
CCDC115-201ENST00000259229 MUM1Q2TAK8 710 aa16.84■□□□□ 0.29
CCDC115-201ENST00000259229 PGS1Q32NB8 556 aa16.84■□□□□ 0.29
CCDC115-201ENST00000259229 TRMT5Q32P41 509 aaKnown RBP16.84■□□□□ 0.29
CCDC115-201ENST00000259229 SNAP47Q5SQN1 464 aa16.84■□□□□ 0.29
CCDC115-201ENST00000259229 WASHC2DQ5SRD0 308 aa16.84■□□□□ 0.29
CCDC115-201ENST00000259229 ZNF655Q8N720 491 aaPredicted RBP16.84■□□□□ 0.29
CCDC115-201ENST00000259229 PCYOX1LQ8NBM8 494 aa16.84■□□□□ 0.29
CCDC115-201ENST00000259229 STARD8Q92502 1023 aa16.84■□□□□ 0.29
CCDC115-201ENST00000259229 UCN3Q969E3 161 aa16.84■□□□□ 0.29
CCDC115-201ENST00000259229 CLPTM1LQ96KA5 538 aa16.84■□□□□ 0.29
CCDC115-201ENST00000259229 CNDP2Q96KP4 475 aaKnown RBP16.84■□□□□ 0.29
CCDC115-201ENST00000259229 C10orf90Q96M02 699 aa16.84■□□□□ 0.29
CCDC115-201ENST00000259229 OR52E6Q96RD3 313 aa16.84■□□□□ 0.29
CCDC115-201ENST00000259229 PRRX2Q99811 253 aa16.84■□□□□ 0.29
CCDC115-201ENST00000259229 ZMYND15Q9H091 742 aa16.84■□□□□ 0.29
CCDC115-201ENST00000259229 PARD6AQ9NPB6 346 aa16.84■□□□□ 0.29
CCDC115-201ENST00000259229 SEMA4GQ9NTN9 838 aa16.84■□□□□ 0.29
CCDC115-201ENST00000259229 MAPRE3Q9UPY8 281 aa16.84■□□□□ 0.29
CCDC115-201ENST00000259229 ERVK-11Q9UQG0 969 aa16.84■□□□□ 0.29
CCDC115-201ENST00000259229 MAN2B2Q9Y2E5 1009 aa16.84■□□□□ 0.29
CCDC115-201ENST00000259229 WBP11Q9Y2W2 641 aaKnown RBP16.84■□□□□ 0.29
CCDC115-201ENST00000259229 CROCCQ5TZA2 2017 aa16.83■□□□□ 0.28
CCDC115-201ENST00000259229 NTN3O00634 580 aaPredicted RBP16.83■□□□□ 0.28
CCDC115-201ENST00000259229 TOX3O15405 576 aaPredicted RBP16.83■□□□□ 0.28
CCDC115-201ENST00000259229 DNAJB6O75190 326 aa16.83■□□□□ 0.28
CCDC115-201ENST00000259229 ANKRD34CP0C6C1 535 aa16.83■□□□□ 0.28
CCDC115-201ENST00000259229 ALOX12P18054 663 aa16.83■□□□□ 0.28
CCDC115-201ENST00000259229 NELFEP18615 380 aaKnown RBP16.83■□□□□ 0.28
CCDC115-201ENST00000259229 DDCP20711 480 aa16.83■□□□□ 0.28
CCDC115-201ENST00000259229 PTPN6P29350 595 aa16.83■□□□□ 0.28
CCDC115-201ENST00000259229 SEPHS1P49903 392 aa16.83■□□□□ 0.28
CCDC115-201ENST00000259229 DUSP3P51452 185 aaPredicted RBP16.83■□□□□ 0.28
CCDC115-201ENST00000259229 SRSF11Q05519 484 aaKnown RBP16.83■□□□□ 0.28
CCDC115-201ENST00000259229 TGM3Q08188 693 aa16.83■□□□□ 0.28
CCDC115-201ENST00000259229 SLAMF1Q13291 335 aa16.83■□□□□ 0.28
CCDC115-201ENST00000259229 DEFB134Q4QY38 66 aa16.83■□□□□ 0.28
CCDC115-201ENST00000259229 C16orf89Q6UX73 402 aa16.83■□□□□ 0.28
CCDC115-201ENST00000259229 PRR23CQ6ZRP0 262 aa16.83■□□□□ 0.28
CCDC115-201ENST00000259229 MSANTD1Q6ZTZ1 278 aa16.83■□□□□ 0.28
CCDC115-201ENST00000259229 ABHD13Q7L211 337 aa16.83■□□□□ 0.28
CCDC115-201ENST00000259229 ARHGAP22Q7Z5H3 698 aa16.83■□□□□ 0.28
CCDC115-201ENST00000259229 GPR180Q86V85 440 aa16.83■□□□□ 0.28
CCDC115-201ENST00000259229 KMT5CQ86Y97 462 aa16.83■□□□□ 0.28
CCDC115-201ENST00000259229 MSRB3Q8IXL7 192 aa16.83■□□□□ 0.28
CCDC115-201ENST00000259229 KIAA2013Q8IYS2 634 aa16.83■□□□□ 0.28
CCDC115-201ENST00000259229 SHISA5Q8N114 240 aa16.83■□□□□ 0.28
CCDC115-201ENST00000259229 DTWD1Q8N5C7 304 aa16.83■□□□□ 0.28
CCDC115-201ENST00000259229 OR4D9Q8NGE8 314 aa16.83■□□□□ 0.28
CCDC115-201ENST00000259229 MTERF3Q96E29 417 aa16.83■□□□□ 0.28
CCDC115-201ENST00000259229 EDEM2Q9BV94 578 aa16.83■□□□□ 0.28
CCDC115-201ENST00000259229 SLC6A13Q9NSD5 602 aa16.83■□□□□ 0.28
CCDC115-201ENST00000259229 ATG4BQ9Y4P1 393 aa16.83■□□□□ 0.28
CCDC115-201ENST00000259229 SLC22A7Q9Y694 548 aa16.83■□□□□ 0.28
CCDC115-201ENST00000259229 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.83■□□□□ 0.28
CCDC115-201ENST00000259229 TRBV5-3A0A0A0MS03 114 aa16.82■□□□□ 0.28
CCDC115-201ENST00000259229 IGHV5-10-1A0A0J9YXX1 117 aa16.82■□□□□ 0.28
CCDC115-201ENST00000259229 A0A1W2PR48 441 aa16.82■□□□□ 0.28
CCDC115-201ENST00000259229 FITM1A5D6W6 292 aa16.82■□□□□ 0.28
CCDC115-201ENST00000259229 URADA6NGE7 173 aa16.82■□□□□ 0.28
CCDC115-201ENST00000259229 TBX19O60806 448 aa16.82■□□□□ 0.28
CCDC115-201ENST00000259229 PRKRAO75569 313 aaKnown RBP16.82■□□□□ 0.28
CCDC115-201ENST00000259229 MSL3P1P0C860 447 aa16.82■□□□□ 0.28
CCDC115-201ENST00000259229 CKMT2P17540 419 aa16.82■□□□□ 0.28
CCDC115-201ENST00000259229 TGM1P22735 817 aa16.82■□□□□ 0.28
CCDC115-201ENST00000259229 ACP1P24666 158 aa16.82■□□□□ 0.28
CCDC115-201ENST00000259229 MTTPP55157 894 aa16.82■□□□□ 0.28
CCDC115-201ENST00000259229 PSME3P61289 254 aa16.82■□□□□ 0.28
CCDC115-201ENST00000259229 SLC14A1Q13336 389 aa16.82■□□□□ 0.28
CCDC115-201ENST00000259229 NFYCQ13952 458 aa16.82■□□□□ 0.28
CCDC115-201ENST00000259229 CAPRIN1Q14444 709 aaKnown RBP16.82■□□□□ 0.28
CCDC115-201ENST00000259229 SLC9A5Q14940 896 aa16.82■□□□□ 0.28
CCDC115-201ENST00000259229 MAPKAPK3Q16644 382 aa16.82■□□□□ 0.28
CCDC115-201ENST00000259229 INAVAQ3KP66 663 aa16.82■□□□□ 0.28
CCDC115-201ENST00000259229 CPTPQ5TA50 214 aa16.82■□□□□ 0.28
CCDC115-201ENST00000259229 PGM2L1Q6PCE3 622 aa16.82■□□□□ 0.28
CCDC115-201ENST00000259229 DHDDSQ86SQ9 333 aa16.82■□□□□ 0.28
CCDC115-201ENST00000259229 ANKRD46Q86W74 232 aa16.82■□□□□ 0.28
CCDC115-201ENST00000259229 MIEF2Q96C03 454 aa16.82■□□□□ 0.28
CCDC115-201ENST00000259229 LRRC58Q96CX6 371 aa16.82■□□□□ 0.28
CCDC115-201ENST00000259229 ZNF764Q96H86 408 aaPredicted RBP16.82■□□□□ 0.28
CCDC115-201ENST00000259229 SERINC2Q96SA4 455 aa16.82■□□□□ 0.28
CCDC115-201ENST00000259229 MAPKAP1Q9BPZ7 522 aa16.82■□□□□ 0.28
CCDC115-201ENST00000259229 INPP5KQ9BT40 448 aa16.82■□□□□ 0.28
CCDC115-201ENST00000259229 THTPAQ9BU02 230 aa16.82■□□□□ 0.28
CCDC115-201ENST00000259229 DUSP26Q9BV47 211 aa16.82■□□□□ 0.28
CCDC115-201ENST00000259229 PAIP1Q9H074 479 aaKnown RBP16.82■□□□□ 0.28
CCDC115-201ENST00000259229 IL1RL2Q9HB29 575 aa16.82■□□□□ 0.28
CCDC115-201ENST00000259229 FAM86C1Q9NVL1 165 aa16.82■□□□□ 0.28
CCDC115-201ENST00000259229 FAM120CQ9NX05 1096 aaKnown RBP16.82■□□□□ 0.28
CCDC115-201ENST00000259229 NDE1Q9NXR1 346 aa16.82■□□□□ 0.28
CCDC115-201ENST00000259229 KCMF1Q9P0J7 381 aa16.82■□□□□ 0.28
CCDC115-201ENST00000259229 CROTQ9UKG9 612 aa16.82■□□□□ 0.28
CCDC115-201ENST00000259229 A8MU76 341 aa16.81■□□□□ 0.28
CCDC115-201ENST00000259229 GALR3O60755 368 aaPredicted RBP16.81■□□□□ 0.28
CCDC115-201ENST00000259229 CBFA2T3O75081 653 aa16.81■□□□□ 0.28
CCDC115-201ENST00000259229 SORBS2O94875 1100 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms