RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 C19orf47Q8N9M1 422 aaKnown RBP12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 PJA1Q8NG27 643 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 SFXN5Q8TD22 340 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 EBPLQ9BY08 206 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 SLC24A3Q9HC58 644 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 COQ3Q9NZJ6 369 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 POLHQ9Y253 713 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 MYRFQ9Y2G1 1151 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 TIMM22Q9Y584 194 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 TEX264Q9Y6I9 313 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 CACNA1SQ13698 1873 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 BANF1O75531 89 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 PROCP04070 461 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 IRS1P35568 1242 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 OMPP47874 163 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 BTBD16Q32M84 506 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 FLYWCH1Q4VC44 716 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 KLHL12Q53G59 568 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 BANPQ8N9N5 519 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 LRRC3Q9BY71 257 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 N6AMT1Q9Y5N5 214 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 RETP07949 1114 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 ZNF20P17024 532 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 EPHA3P29320 983 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 NFE2L1Q14494 772 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 KRT74Q7RTS7 529 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 MFSD9Q8NBP5 474 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 NETO2Q8NC67 525 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 OR2L5Q8NG80 312 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 OR4F6Q8NGB9 312 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 VANGL1Q8TAA9 524 aaPredicted RBP12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 GPBAR1Q8TDU6 330 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 CUTCQ9NTM9 273 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 G3V2T6 193 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 MED26O95402 600 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 AHSGP02765 367 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 MSL3P1P0C860 447 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 HLA-FP30511 346 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 SLC6A4P31645 630 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 CDK9P50750 372 aaKnown RBP12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 DPTQ07507 201 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 SLAMF1Q13291 335 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 POMZP3Q6PJE2 187 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 FAM227AF5H4B4 570 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 ADAMTS3O15072 1205 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 GADD45GO95257 159 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 GRIA3P42263 894 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 SLC15A1P46059 708 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 FGFBP1Q14512 234 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 SNAPC1Q16533 368 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 C1orf220Q5T0J3 134 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 GPR137CQ8N3F9 429 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 OSBPL11Q9BXB4 747 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 SLC35A3Q9Y2D2 325 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 TEX13CA0A0J9YWL9 993 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 METTL12A8MUP2 240 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 CCL22O00626 93 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 HCN1O60741 890 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 CBX5P45973 191 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 HTR4Q13639 388 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 TTC9BQ8N6N2 239 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 CDRT4Q8N9R6 151 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 IFI44Q8TCB0 444 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 ELF4Q99607 663 aaPredicted RBP12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 ACAD8Q9UKU7 415 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 IGLV3-10A0A075B6K4 115 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 CCDC163A0A0D9SF12 145 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 ZNF891A8MT65 544 aaPredicted RBP12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 ZNF670-ZNF695F2Z2N8 137 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 ZNF208O43345 1280 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 AHCYP23526 432 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 CAPZA1P52907 286 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 SEC24CP53992 1094 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 GALNT1Q10472 559 aaPredicted RBP12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 DGUOKQ16854 277 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 ABRAXAS1Q6UWZ7 409 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 ARHGAP36Q6ZRI8 547 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 GSTCDQ8NEC7 633 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 OR14L1PQ8NHC6 308 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 FRS2Q8WU20 508 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 DCBLD2Q96PD2 775 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 EHD1Q9H4M9 534 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 LHX3Q9UBR4 397 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 A0A1W2PPC4 97 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 TTC24A2A3L6 582 aaPredicted RBP12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 SHISA7A6NL88 538 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 CXCR6O00574 342 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 ZDHHC11BP0C7U3 371 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 ITIH1P19827 911 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 CAPGP40121 348 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 RPE65Q16518 533 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 ACSBG2Q5FVE4 666 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 TRIQKQ629K1 86 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 REP15Q6BDI9 236 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 DIO2Q92813 273 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 TAAR9Q96RI9 348 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 IFT27Q9BW83 186 aa12.87□□□□□ -0.35
PRPF38A-201ENST00000257181 A0A1B0GVT2 93 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 HTR3EA5X5Y0 456 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 WDPCPO95876 746 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms