RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 PLEKHS1Q5SXH7 462 aa18.15■□□□□ 0.5
SNX4-201ENST00000251775 ZDHHC20Q5W0Z9 365 aa18.15■□□□□ 0.5
SNX4-201ENST00000251775 HSD11B1LQ7Z5J1 315 aa18.15■□□□□ 0.5
SNX4-201ENST00000251775 FAM9CQ8IZT9 166 aa18.15■□□□□ 0.5
SNX4-201ENST00000251775 OR2A12Q8NGT7 310 aa18.15■□□□□ 0.5
SNX4-201ENST00000251775 FYTTD1Q96QD9 318 aaKnown RBP18.15■□□□□ 0.5
SNX4-201ENST00000251775 BARHL1Q9BZE3 327 aa18.15■□□□□ 0.5
SNX4-201ENST00000251775 RANGRFQ9HD47 186 aaPredicted RBP18.15■□□□□ 0.5
SNX4-201ENST00000251775 DNAJC11Q9NVH1 559 aa18.15■□□□□ 0.5
SNX4-201ENST00000251775 GPSM3Q9Y4H4 160 aa18.15■□□□□ 0.5
SNX4-201ENST00000251775 ERVH48-1M5A8F1 160 aa18.14■□□□□ 0.49
SNX4-201ENST00000251775 TNFRSF11BO00300 401 aa18.14■□□□□ 0.49
SNX4-201ENST00000251775 TFECO14948 347 aaPredicted RBP18.14■□□□□ 0.49
SNX4-201ENST00000251775 ITGB8P26012 769 aa18.14■□□□□ 0.49
SNX4-201ENST00000251775 PFN3P60673 137 aa18.14■□□□□ 0.49
SNX4-201ENST00000251775 CSTF3Q12996 717 aaKnown RBP18.14■□□□□ 0.49
SNX4-201ENST00000251775 ZNF648Q5T619 568 aaPredicted RBP18.14■□□□□ 0.49
SNX4-201ENST00000251775 RFPL4BQ6ZWI9 263 aa18.14■□□□□ 0.49
SNX4-201ENST00000251775 HOMEZQ8IX15 550 aa18.14■□□□□ 0.49
SNX4-201ENST00000251775 KREMEN2Q8NCW0 462 aa18.14■□□□□ 0.49
SNX4-201ENST00000251775 OR10G2Q8NGC3 310 aa18.14■□□□□ 0.49
SNX4-201ENST00000251775 UTP15Q8TED0 518 aaKnown RBP18.14■□□□□ 0.49
SNX4-201ENST00000251775 JPH3Q8WXH2 748 aaPredicted RBP18.14■□□□□ 0.49
SNX4-201ENST00000251775 SLC7A6Q92536 515 aa18.14■□□□□ 0.49
SNX4-201ENST00000251775 MMP28Q9H239 520 aa18.14■□□□□ 0.49
SNX4-201ENST00000251775 PADI2Q9Y2J8 665 aa18.14■□□□□ 0.49
SNX4-201ENST00000251775 PTPRSQ13332 1948 aa18.14■□□□□ 0.49
SNX4-201ENST00000251775 RGS5O15539 181 aa18.14■□□□□ 0.49
SNX4-201ENST00000251775 AMD1P17707 334 aa18.14■□□□□ 0.49
SNX4-201ENST00000251775 RPS5P46782 204 aaKnown RBP18.14■□□□□ 0.49
SNX4-201ENST00000251775 ABRQ12979 859 aa18.14■□□□□ 0.49
SNX4-201ENST00000251775 CHIT1Q13231 466 aa18.14■□□□□ 0.49
SNX4-201ENST00000251775 UGT8Q16880 541 aa18.14■□□□□ 0.49
SNX4-201ENST00000251775 FRG2Q64ET8 278 aa18.14■□□□□ 0.49
SNX4-201ENST00000251775 RNF130Q86XS8 419 aa18.14■□□□□ 0.49
SNX4-201ENST00000251775 CLECL1Q8IZS7 167 aa18.14■□□□□ 0.49
SNX4-201ENST00000251775 DEPDC4Q8N2C3 294 aa18.14■□□□□ 0.49
SNX4-201ENST00000251775 GRPEL2Q8TAA5 225 aa18.14■□□□□ 0.49
SNX4-201ENST00000251775 TCEAL4Q96EI5 215 aa18.14■□□□□ 0.49
SNX4-201ENST00000251775 FRG2BQ96QU4 278 aa18.14■□□□□ 0.49
SNX4-201ENST00000251775 NIPSNAP1Q9BPW8 284 aa18.14■□□□□ 0.49
SNX4-201ENST00000251775 TAPBPLQ9BX59 468 aa18.14■□□□□ 0.49
SNX4-201ENST00000251775 BBS2Q9BXC9 721 aa18.14■□□□□ 0.49
SNX4-201ENST00000251775 CDCA4Q9BXL8 241 aa18.14■□□□□ 0.49
SNX4-201ENST00000251775 FAM8A1Q9UBU6 413 aa18.14■□□□□ 0.49
SNX4-201ENST00000251775 PLXNA2O75051 1894 aa18.13■□□□□ 0.49
SNX4-201ENST00000251775 LINC00854A0A1B0GVQ3 168 aa18.13■□□□□ 0.49
SNX4-201ENST00000251775 SUV39H1O43463 412 aa18.13■□□□□ 0.49
SNX4-201ENST00000251775 CPSF4O95639 269 aaKnown RBP18.13■□□□□ 0.49
SNX4-201ENST00000251775 YES1P07947 543 aa18.13■□□□□ 0.49
SNX4-201ENST00000251775 IL7P13232 177 aa18.13■□□□□ 0.49
SNX4-201ENST00000251775 CSF2RAP15509 400 aa18.13■□□□□ 0.49
SNX4-201ENST00000251775 AZGP1P25311 298 aaKnown RBP18.13■□□□□ 0.49
SNX4-201ENST00000251775 AQP1P29972 269 aa18.13■□□□□ 0.49
SNX4-201ENST00000251775 PPM1AP35813 382 aa18.13■□□□□ 0.49
SNX4-201ENST00000251775 RPS19P39019 145 aaKnown RBP18.13■□□□□ 0.49
SNX4-201ENST00000251775 P2RX3P56373 397 aa18.13■□□□□ 0.49
SNX4-201ENST00000251775 SP140Q13342 867 aa18.13■□□□□ 0.49
SNX4-201ENST00000251775 CCDC149Q6ZUS6 474 aa18.13■□□□□ 0.49
SNX4-201ENST00000251775 Q6ZVL8 140 aa18.13■□□□□ 0.49
SNX4-201ENST00000251775 ADIPOR2Q86V24 386 aa18.13■□□□□ 0.49
SNX4-201ENST00000251775 C9orf43Q8TAL5 461 aaPredicted RBP18.13■□□□□ 0.49
SNX4-201ENST00000251775 CLIP3Q96DZ5 547 aa18.13■□□□□ 0.49
SNX4-201ENST00000251775 MED30Q96HR3 178 aa18.13■□□□□ 0.49
SNX4-201ENST00000251775 EBPLQ9BY08 206 aa18.13■□□□□ 0.49
SNX4-201ENST00000251775 FAM83DQ9H4H8 585 aa18.13■□□□□ 0.49
SNX4-201ENST00000251775 NDUFAF4Q9P032 175 aa18.13■□□□□ 0.49
SNX4-201ENST00000251775 UPK3BL1B0FP48 263 aa18.13■□□□□ 0.49
SNX4-201ENST00000251775 UPK3BL2E5RIL1 263 aa18.13■□□□□ 0.49
SNX4-201ENST00000251775 SLC16A5O15375 505 aa18.13■□□□□ 0.49
SNX4-201ENST00000251775 CXCL14O95715 111 aa18.13■□□□□ 0.49
SNX4-201ENST00000251775 ABCB1P08183 1280 aaPredicted RBP18.13■□□□□ 0.49
SNX4-201ENST00000251775 CD22P20273 847 aa18.13■□□□□ 0.49
SNX4-201ENST00000251775 MAPK1P28482 360 aa18.13■□□□□ 0.49
SNX4-201ENST00000251775 TMEM215Q68D42 235 aa18.13■□□□□ 0.49
SNX4-201ENST00000251775 SIGIRRQ6IA17 410 aa18.13■□□□□ 0.49
SNX4-201ENST00000251775 NOXRED1Q6NXP6 359 aa18.13■□□□□ 0.49
SNX4-201ENST00000251775 ERAP2Q6P179 960 aa18.13■□□□□ 0.49
SNX4-201ENST00000251775 LYPD8Q6UX82 237 aa18.13■□□□□ 0.49
SNX4-201ENST00000251775 GPR65Q8IYL9 337 aa18.13■□□□□ 0.49
SNX4-201ENST00000251775 ASPNQ9BXN1 380 aa18.13■□□□□ 0.49
SNX4-201ENST00000251775 IRF2BPLQ9H1B7 796 aa18.13■□□□□ 0.49
SNX4-201ENST00000251775 LINC00597Q9H2U6 94 aa18.13■□□□□ 0.49
SNX4-201ENST00000251775 NUFIP1Q9UHK0 495 aaKnown RBP18.13■□□□□ 0.49
SNX4-201ENST00000251775 DUSP12Q9UNI6 340 aa18.13■□□□□ 0.49
SNX4-201ENST00000251775 A0A1W2PQ09 198 aa18.12■□□□□ 0.49
SNX4-201ENST00000251775 EFCAB10A6NFE3 127 aa18.12■□□□□ 0.49
SNX4-201ENST00000251775 TMEM202A6NGA9 273 aa18.12■□□□□ 0.49
SNX4-201ENST00000251775 OR2AG2A6NM03 316 aa18.12■□□□□ 0.49
SNX4-201ENST00000251775 FAM25AB3EWG3 89 aa18.12■□□□□ 0.49
SNX4-201ENST00000251775 FAM25CB3EWG5 89 aa18.12■□□□□ 0.49
SNX4-201ENST00000251775 FAM25GB3EWG6 89 aa18.12■□□□□ 0.49
SNX4-201ENST00000251775 NPIPB8E9PQR5 432 aa18.12■□□□□ 0.49
SNX4-201ENST00000251775 YY2O15391 372 aa18.12■□□□□ 0.49
SNX4-201ENST00000251775 POLR2LP62875 67 aaKnown RBP18.12■□□□□ 0.49
SNX4-201ENST00000251775 HYAL2Q12891 473 aa18.12■□□□□ 0.49
SNX4-201ENST00000251775 GPAT3Q53EU6 434 aa18.12■□□□□ 0.49
SNX4-201ENST00000251775 LAX1Q8IWV1 398 aa18.12■□□□□ 0.49
SNX4-201ENST00000251775 CADM2Q8N3J6 435 aa18.12■□□□□ 0.49
SNX4-201ENST00000251775 HCAR2Q8TDS4 363 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms