RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 KLF13Q9Y2Y9 288 aaPredicted RBP19.67■□□□□ 0.74
NEDD8-201ENST00000250495 MTO1Q9Y2Z2 717 aaKnown RBP19.67■□□□□ 0.74
NEDD8-201ENST00000250495 PKDREJQ9NTG1 2253 aa19.66■□□□□ 0.74
NEDD8-201ENST00000250495 TRBV11-1A0A0K0K1C0 115 aa19.66■□□□□ 0.74
NEDD8-201ENST00000250495 COX6B1P14854 86 aa19.66■□□□□ 0.74
NEDD8-201ENST00000250495 HNRNPH1P31943 449 aaKnown RBP19.66■□□□□ 0.74
NEDD8-201ENST00000250495 SLC13A2Q13183 592 aa19.66■□□□□ 0.74
NEDD8-201ENST00000250495 RCN2Q14257 317 aa19.66■□□□□ 0.74
NEDD8-201ENST00000250495 TRIM40Q6P9F5 258 aa19.66■□□□□ 0.74
NEDD8-201ENST00000250495 CAPN12Q6ZSI9 719 aa19.66■□□□□ 0.74
NEDD8-201ENST00000250495 GPSM1Q86YR5 675 aa19.66■□□□□ 0.74
NEDD8-201ENST00000250495 SCUBE1Q8IWY4 988 aa19.66■□□□□ 0.74
NEDD8-201ENST00000250495 ZNF595Q8IYB9 648 aa19.66■□□□□ 0.74
NEDD8-201ENST00000250495 EID3Q8N140 333 aa19.66■□□□□ 0.74
NEDD8-201ENST00000250495 TMEM156Q8N614 296 aa19.66■□□□□ 0.74
NEDD8-201ENST00000250495 OR2L5Q8NG80 312 aa19.66■□□□□ 0.74
NEDD8-201ENST00000250495 VMP1Q96GC9 406 aa19.66■□□□□ 0.74
NEDD8-201ENST00000250495 CCDC77Q9BR77 488 aa19.66■□□□□ 0.74
NEDD8-201ENST00000250495 REXO4Q9GZR2 422 aaKnown RBP19.66■□□□□ 0.74
NEDD8-201ENST00000250495 SMYD2Q9NRG4 433 aa19.66■□□□□ 0.74
NEDD8-201ENST00000250495 WWOXQ9NZC7 414 aa19.66■□□□□ 0.74
NEDD8-201ENST00000250495 PPIEQ9UNP9 301 aaKnown RBP19.66■□□□□ 0.74
NEDD8-201ENST00000250495 ABCA12Q86UK0 2595 aa19.66■□□□□ 0.74
NEDD8-201ENST00000250495 NCOA6Q14686 2063 aaPredicted RBP19.66■□□□□ 0.74
NEDD8-201ENST00000250495 LRBAP50851 2863 aa19.65■□□□□ 0.74
NEDD8-201ENST00000250495 A0A0G2JN53 185 aa19.65■□□□□ 0.74
NEDD8-201ENST00000250495 PRRG2O14669 202 aa19.65■□□□□ 0.74
NEDD8-201ENST00000250495 TAPBPO15533 448 aa19.65■□□□□ 0.74
NEDD8-201ENST00000250495 STK16O75716 305 aa19.65■□□□□ 0.74
NEDD8-201ENST00000250495 WISP3O95389 354 aaPredicted RBP19.65■□□□□ 0.74
NEDD8-201ENST00000250495 CCDC166P0CW27 439 aa19.65■□□□□ 0.74
NEDD8-201ENST00000250495 PLA2G16P53816 162 aa19.65■□□□□ 0.74
NEDD8-201ENST00000250495 ATP6V0D1P61421 351 aa19.65■□□□□ 0.74
NEDD8-201ENST00000250495 CALCOCO2Q13137 446 aa19.65■□□□□ 0.74
NEDD8-201ENST00000250495 ADPRMQ3LIE5 342 aa19.65■□□□□ 0.74
NEDD8-201ENST00000250495 RNFT1Q5M7Z0 435 aa19.65■□□□□ 0.74
NEDD8-201ENST00000250495 SULT1C3Q6IMI6 304 aa19.65■□□□□ 0.74
NEDD8-201ENST00000250495 CYS1Q717R9 158 aa19.65■□□□□ 0.74
NEDD8-201ENST00000250495 SULF2Q8IWU5 870 aa19.65■□□□□ 0.74
NEDD8-201ENST00000250495 SERINC2Q96SA4 455 aa19.65■□□□□ 0.74
NEDD8-201ENST00000250495 EIF3HO15372 352 aaKnown RBP eCLIP19.64■□□□□ 0.73
NEDD8-201ENST00000250495 ITGA10O75578 1167 aa19.64■□□□□ 0.73
NEDD8-201ENST00000250495 PIAS1O75925 651 aa19.64■□□□□ 0.73
NEDD8-201ENST00000250495 ZFAND5O76080 213 aa19.64■□□□□ 0.73
NEDD8-201ENST00000250495 CLDN14O95500 239 aa19.64■□□□□ 0.73
NEDD8-201ENST00000250495 STMN1P16949 149 aa19.64■□□□□ 0.73
NEDD8-201ENST00000250495 SSTR1P30872 391 aa19.64■□□□□ 0.73
NEDD8-201ENST00000250495 MEOX1P50221 254 aa19.64■□□□□ 0.73
NEDD8-201ENST00000250495 TGM3Q08188 693 aa19.64■□□□□ 0.73
NEDD8-201ENST00000250495 XKR6Q5GH73 641 aa19.64■□□□□ 0.73
NEDD8-201ENST00000250495 GDF7Q7Z4P5 450 aa19.64■□□□□ 0.73
NEDD8-201ENST00000250495 DOLPP1Q86YN1 238 aa19.64■□□□□ 0.73
NEDD8-201ENST00000250495 CYP4Z2PQ8N1L4 340 aa19.64■□□□□ 0.73
NEDD8-201ENST00000250495 TMEM132CQ8N3T6 1108 aa19.64■□□□□ 0.73
NEDD8-201ENST00000250495 SPATA6LQ8N4H0 392 aa19.64■□□□□ 0.73
NEDD8-201ENST00000250495 AGAP11Q8TF27 550 aa19.64■□□□□ 0.73
NEDD8-201ENST00000250495 PTCD3Q96EY7 689 aaKnown RBP19.64■□□□□ 0.73
NEDD8-201ENST00000250495 QRFPRQ96P65 431 aa19.64■□□□□ 0.73
NEDD8-201ENST00000250495 CPNE1Q99829 537 aa19.64■□□□□ 0.73
NEDD8-201ENST00000250495 ERP44Q9BS26 406 aa19.64■□□□□ 0.73
NEDD8-201ENST00000250495 TMEM79Q9BSE2 394 aa19.64■□□□□ 0.73
NEDD8-201ENST00000250495 COPS7BQ9H9Q2 264 aaPredicted RBP19.64■□□□□ 0.73
NEDD8-201ENST00000250495 CAB39LQ9H9S4 337 aa19.64■□□□□ 0.73
NEDD8-201ENST00000250495 SAYSD1Q9NPB0 183 aa19.64■□□□□ 0.73
NEDD8-201ENST00000250495 WHRNQ9P202 907 aa19.64■□□□□ 0.73
NEDD8-201ENST00000250495 YARS2Q9Y2Z4 477 aaKnown RBP19.64■□□□□ 0.73
NEDD8-201ENST00000250495 FAM187AA6NFU0 413 aa19.63■□□□□ 0.73
NEDD8-201ENST00000250495 E9PLN8 166 aa19.63■□□□□ 0.73
NEDD8-201ENST00000250495 TFECO14948 347 aaPredicted RBP19.63■□□□□ 0.73
NEDD8-201ENST00000250495 PEX1O43933 1283 aa19.63■□□□□ 0.73
NEDD8-201ENST00000250495 CD1DP15813 335 aa19.63■□□□□ 0.73
NEDD8-201ENST00000250495 ELAVL4P26378 380 aaKnown RBP19.63■□□□□ 0.73
NEDD8-201ENST00000250495 HSPA7P48741 367 aa19.63■□□□□ 0.73
NEDD8-201ENST00000250495 GPR143P51810 404 aa19.63■□□□□ 0.73
NEDD8-201ENST00000250495 MTTPP55157 894 aa19.63■□□□□ 0.73
NEDD8-201ENST00000250495 HSF1Q00613 529 aa19.63■□□□□ 0.73
NEDD8-201ENST00000250495 LAPTM5Q13571 262 aa19.63■□□□□ 0.73
NEDD8-201ENST00000250495 HIST2H2ACQ16777 129 aaPredicted RBP19.63■□□□□ 0.73
NEDD8-201ENST00000250495 HIST2H2AA3Q6FI13 130 aa19.63■□□□□ 0.73
NEDD8-201ENST00000250495 ABHD17CQ6PCB6 329 aa19.63■□□□□ 0.73
NEDD8-201ENST00000250495 MAATS1Q7Z4T9 603 aa19.63■□□□□ 0.73
NEDD8-201ENST00000250495 SNX31Q8N9S9 440 aa19.63■□□□□ 0.73
NEDD8-201ENST00000250495 PHF10Q8WUB8 498 aaKnown RBP19.63■□□□□ 0.73
NEDD8-201ENST00000250495 NCLNQ969V3 563 aa19.63■□□□□ 0.73
NEDD8-201ENST00000250495 MTFMTQ96DP5 389 aaKnown RBP19.63■□□□□ 0.73
NEDD8-201ENST00000250495 WDR34Q96EX3 536 aa19.63■□□□□ 0.73
NEDD8-201ENST00000250495 PHF12Q96QT6 1004 aa19.63■□□□□ 0.73
NEDD8-201ENST00000250495 GPR22Q99680 433 aa19.63■□□□□ 0.73
NEDD8-201ENST00000250495 RBBP8Q99708 897 aa19.63■□□□□ 0.73
NEDD8-201ENST00000250495 VKORC1Q9BQB6 163 aa19.63■□□□□ 0.73
NEDD8-201ENST00000250495 EFCAB11Q9BUY7 163 aa19.63■□□□□ 0.73
NEDD8-201ENST00000250495 ADAP2Q9NPF8 381 aa19.63■□□□□ 0.73
NEDD8-201ENST00000250495 CD274Q9NZQ7 290 aa19.63■□□□□ 0.73
NEDD8-201ENST00000250495 ZNF490Q9ULM2 529 aaPredicted RBP19.63■□□□□ 0.73
NEDD8-201ENST00000250495 DAPP1Q9UN19 280 aa19.63■□□□□ 0.73
NEDD8-201ENST00000250495 ASB1Q9Y576 335 aa19.63■□□□□ 0.73
NEDD8-201ENST00000250495 CLDN16Q9Y5I7 305 aa19.63■□□□□ 0.73
NEDD8-201ENST00000250495 CXorf49A8MYA2 514 aaPredicted RBP19.62■□□□□ 0.73
NEDD8-201ENST00000250495 PHGDHO43175 533 aaKnown RBP19.62■□□□□ 0.73
NEDD8-201ENST00000250495 CTNSO60931 367 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms