RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 CEP44Q9C0F1 390 aa16.11■□□□□ 0.17
SSPN-201ENST00000242729 DMRT3Q9NQL9 472 aa16.11■□□□□ 0.17
SSPN-201ENST00000242729 NUMA1Q14980 2115 aa16.11■□□□□ 0.17
SSPN-201ENST00000242729 MYO9BQ13459 2157 aa16.11■□□□□ 0.17
SSPN-201ENST00000242729 A0A1W2PRB8 838 aa16.11■□□□□ 0.17
SSPN-201ENST00000242729 ANKDD1BA6NHY2 528 aa16.11■□□□□ 0.17
SSPN-201ENST00000242729 FURINP09958 794 aa16.11■□□□□ 0.17
SSPN-201ENST00000242729 PCGF2P35227 344 aa16.11■□□□□ 0.17
SSPN-201ENST00000242729 MMP12P39900 470 aa16.11■□□□□ 0.17
SSPN-201ENST00000242729 TAP2Q03519 686 aa16.11■□□□□ 0.17
SSPN-201ENST00000242729 ANXA8L1Q5VT79 327 aa16.11■□□□□ 0.17
SSPN-201ENST00000242729 ZNF547Q8IVP9 402 aa16.11■□□□□ 0.17
SSPN-201ENST00000242729 AQP11Q8NBQ7 271 aa16.11■□□□□ 0.17
SSPN-201ENST00000242729 COQ8BQ96D53 544 aa16.11■□□□□ 0.17
SSPN-201ENST00000242729 F2RL3Q96RI0 385 aa16.11■□□□□ 0.17
SSPN-201ENST00000242729 NECTIN3Q9NQS3 549 aa16.11■□□□□ 0.17
SSPN-201ENST00000242729 BTNL2Q9UIR0 455 aa16.11■□□□□ 0.17
SSPN-201ENST00000242729 TBX21Q9UL17 535 aa16.11■□□□□ 0.17
SSPN-201ENST00000242729 TRBC2A0A5B9 178 aa16.1■□□□□ 0.17
SSPN-201ENST00000242729 LZTS3O60299 673 aaPredicted RBP16.1■□□□□ 0.17
SSPN-201ENST00000242729 PRMT3O60678 531 aa16.1■□□□□ 0.17
SSPN-201ENST00000242729 POP7O75817 140 aaKnown RBP16.1■□□□□ 0.17
SSPN-201ENST00000242729 GASTP01350 101 aa16.1■□□□□ 0.17
SSPN-201ENST00000242729 BCHEP06276 602 aa16.1■□□□□ 0.17
SSPN-201ENST00000242729 MSANTD1Q6ZTZ1 278 aa16.1■□□□□ 0.17
SSPN-201ENST00000242729 CCDC149Q6ZUS6 474 aa16.1■□□□□ 0.17
SSPN-201ENST00000242729 PLA2G15Q8NCC3 412 aa16.1■□□□□ 0.17
SSPN-201ENST00000242729 ZNF675Q8TD23 568 aa16.1■□□□□ 0.17
SSPN-201ENST00000242729 EPYCQ99645 322 aa16.1■□□□□ 0.17
SSPN-201ENST00000242729 WDR70Q9NW82 654 aa16.1■□□□□ 0.17
SSPN-201ENST00000242729 ZNF282Q9UDV7 671 aaPredicted RBP16.1■□□□□ 0.17
SSPN-201ENST00000242729 PRRT4C9JH25 899 aa16.1■□□□□ 0.17
SSPN-201ENST00000242729 UGDHO60701 494 aa16.1■□□□□ 0.17
SSPN-201ENST00000242729 TNFRSF21O75509 655 aa16.1■□□□□ 0.17
SSPN-201ENST00000242729 SOD1P00441 154 aa16.1■□□□□ 0.17
SSPN-201ENST00000242729 CKMT1AP12532 417 aa16.1■□□□□ 0.17
SSPN-201ENST00000242729 GGT2P36268 569 aa16.1■□□□□ 0.17
SSPN-201ENST00000242729 DNAJC22Q8N4W6 341 aa16.1■□□□□ 0.17
SSPN-201ENST00000242729 ZBTB8BQ8NAP8 495 aaPredicted RBP16.1■□□□□ 0.17
SSPN-201ENST00000242729 B3GNT7Q8NFL0 401 aa16.1■□□□□ 0.17
SSPN-201ENST00000242729 PHF10Q8WUB8 498 aaKnown RBP16.1■□□□□ 0.17
SSPN-201ENST00000242729 WDR12Q9GZL7 423 aaKnown RBP16.1■□□□□ 0.17
SSPN-201ENST00000242729 CXorf36Q9H7Y0 433 aa16.1■□□□□ 0.17
SSPN-201ENST00000242729 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.1■□□□□ 0.17
SSPN-201ENST00000242729 QPCTLQ9NXS2 382 aa16.1■□□□□ 0.17
SSPN-201ENST00000242729 PSORS1C1Q9UIG5 152 aa16.1■□□□□ 0.17
SSPN-201ENST00000242729 KNL1Q8NG31 2342 aa16.1■□□□□ 0.17
SSPN-201ENST00000242729 PNMA8CA0A1B0GUJ8 204 aa16.09■□□□□ 0.17
SSPN-201ENST00000242729 OTOL1A6NHN0 477 aaPredicted RBP16.09■□□□□ 0.17
SSPN-201ENST00000242729 GLOD5A6NK44 160 aa16.09■□□□□ 0.17
SSPN-201ENST00000242729 C1GALT1C1LP0DN25 315 aa16.09■□□□□ 0.17
SSPN-201ENST00000242729 IRS1P35568 1242 aa16.09■□□□□ 0.17
SSPN-201ENST00000242729 SERPINB10P48595 397 aa16.09■□□□□ 0.17
SSPN-201ENST00000242729 LSM11P83369 360 aaKnown RBP eCLIP16.09■□□□□ 0.17
SSPN-201ENST00000242729 PTGES3Q15185 160 aaKnown RBP16.09■□□□□ 0.17
SSPN-201ENST00000242729 ERAP2Q6P179 960 aa16.09■□□□□ 0.17
SSPN-201ENST00000242729 TTC23LQ6PF05 361 aa16.09■□□□□ 0.17
SSPN-201ENST00000242729 TAGAPQ8N103 731 aa16.09■□□□□ 0.17
SSPN-201ENST00000242729 C12orf76Q8N812 135 aaPredicted RBP16.09■□□□□ 0.17
SSPN-201ENST00000242729 KCNS3Q9BQ31 491 aa16.09■□□□□ 0.17
SSPN-201ENST00000242729 RSPO3Q9BXY4 272 aaPredicted RBP16.09■□□□□ 0.17
SSPN-201ENST00000242729 BRF2Q9HAW0 419 aa16.09■□□□□ 0.17
SSPN-201ENST00000242729 SLAMF7Q9NQ25 335 aa16.09■□□□□ 0.17
SSPN-201ENST00000242729 PAK6Q9NQU5 681 aaPredicted RBP16.09■□□□□ 0.17
SSPN-201ENST00000242729 C1GALT1Q9NS00 363 aa16.09■□□□□ 0.17
SSPN-201ENST00000242729 CUEDC1Q9NWM3 386 aaPredicted RBP16.09■□□□□ 0.17
SSPN-201ENST00000242729 TAC3Q9UHF0 121 aa16.09■□□□□ 0.17
SSPN-201ENST00000242729 PADI2Q9Y2J8 665 aa16.09■□□□□ 0.17
SSPN-201ENST00000242729 FAM32AQ9Y421 112 aaKnown RBP16.09■□□□□ 0.17
SSPN-201ENST00000242729 RNASET2O00584 256 aaKnown RBP16.09■□□□□ 0.17
SSPN-201ENST00000242729 PRKRAO75569 313 aaKnown RBP16.09■□□□□ 0.17
SSPN-201ENST00000242729 AP2A2O94973 939 aa16.09■□□□□ 0.17
SSPN-201ENST00000242729 GADD45GO95257 159 aa16.09■□□□□ 0.17
SSPN-201ENST00000242729 MNX1P50219 401 aaPredicted RBP16.09■□□□□ 0.17
SSPN-201ENST00000242729 ARMCX4Q5H9R4 360 aa16.09■□□□□ 0.17
SSPN-201ENST00000242729 CEACAM20Q6UY09 585 aa16.09■□□□□ 0.17
SSPN-201ENST00000242729 SLC5A11Q8WWX8 675 aa16.09■□□□□ 0.17
SSPN-201ENST00000242729 SLC38A4Q969I6 547 aa16.09■□□□□ 0.17
SSPN-201ENST00000242729 EXOSC8Q96B26 276 aaKnown RBP16.09■□□□□ 0.17
SSPN-201ENST00000242729 MROQ9BYG7 248 aa16.09■□□□□ 0.17
SSPN-201ENST00000242729 PCDHGA2Q9Y5H1 932 aa16.09■□□□□ 0.17
SSPN-201ENST00000242729 DOCK9Q9BZ29 2069 aa16.09■□□□□ 0.17
SSPN-201ENST00000242729 TRANK1O15050 2925 aa16.09■□□□□ 0.17
SSPN-201ENST00000242729 TRBV4-1A0A0J9YWV2 114 aa16.09■□□□□ 0.17
SSPN-201ENST00000242729 LINC00854A0A1B0GVQ3 168 aa16.09■□□□□ 0.17
SSPN-201ENST00000242729 TRIM43BA6NCK2 446 aa16.09■□□□□ 0.17
SSPN-201ENST00000242729 PRR23AA6NEV1 266 aa16.09■□□□□ 0.17
SSPN-201ENST00000242729 CLCA1A8K7I4 914 aa16.09■□□□□ 0.17
SSPN-201ENST00000242729 ADAMDEC1O15204 470 aa16.09■□□□□ 0.17
SSPN-201ENST00000242729 SPINT1O43278 529 aa16.09■□□□□ 0.17
SSPN-201ENST00000242729 APOL3O95236 402 aa16.09■□□□□ 0.17
SSPN-201ENST00000242729 ADORA3P0DMS8 318 aa16.09■□□□□ 0.17
SSPN-201ENST00000242729 CEBPBP17676 345 aa16.09■□□□□ 0.17
SSPN-201ENST00000242729 DGKGP49619 791 aa16.09■□□□□ 0.17
SSPN-201ENST00000242729 CXCR4P61073 352 aa16.09■□□□□ 0.17
SSPN-201ENST00000242729 KCNC3Q14003 757 aa16.09■□□□□ 0.17
SSPN-201ENST00000242729 MICAQ29983 383 aa16.09■□□□□ 0.17
SSPN-201ENST00000242729 NEK10Q6ZWH5 1172 aa16.09■□□□□ 0.17
SSPN-201ENST00000242729 TRIM43Q96BQ3 446 aaPredicted RBP16.09■□□□□ 0.17
SSPN-201ENST00000242729 ZNF556Q9HAH1 456 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms