RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 CMTM8Q8IZV2 173 aa12.77□□□□□ -0.36
NEK9-201ENST00000238616 DPAGT1Q9H3H5 408 aa12.77□□□□□ -0.36
NEK9-201ENST00000238616 SCP2D1Q9UJQ7 156 aa12.77□□□□□ -0.36
NEK9-201ENST00000238616 ZFC3H1O60293 1989 aaKnown RBP12.77□□□□□ -0.36
NEK9-201ENST00000238616 LCN1P31025 176 aa12.77□□□□□ -0.37
NEK9-201ENST00000238616 RSU1Q15404 277 aa12.77□□□□□ -0.37
NEK9-201ENST00000238616 ITPRIPL2Q3MIP1 535 aa12.77□□□□□ -0.37
NEK9-201ENST00000238616 RALGPS1Q5JS13 557 aa12.77□□□□□ -0.37
NEK9-201ENST00000238616 C6orf183Q5T699 404 aa12.77□□□□□ -0.37
NEK9-201ENST00000238616 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.77□□□□□ -0.37
NEK9-201ENST00000238616 ZNF514Q96K75 400 aaPredicted RBP12.77□□□□□ -0.37
NEK9-201ENST00000238616 ZNF451Q9Y4E5 1061 aa12.77□□□□□ -0.37
NEK9-201ENST00000238616 LAMA4Q16363 1823 aa12.77□□□□□ -0.37
NEK9-201ENST00000238616 PDLIM1O00151 329 aa12.77□□□□□ -0.37
NEK9-201ENST00000238616 SDC3O75056 442 aa12.77□□□□□ -0.37
NEK9-201ENST00000238616 RP2O75695 350 aa12.77□□□□□ -0.37
NEK9-201ENST00000238616 MERTKQ12866 999 aa12.77□□□□□ -0.37
NEK9-201ENST00000238616 ASTE1Q2TB18 679 aaPredicted RBP12.77□□□□□ -0.37
NEK9-201ENST00000238616 ANKDD1AQ495B1 522 aa12.77□□□□□ -0.37
NEK9-201ENST00000238616 FKBP1CQ5VVH2 108 aa12.77□□□□□ -0.37
NEK9-201ENST00000238616 UBE2Q1Q7Z7E8 422 aa12.77□□□□□ -0.37
NEK9-201ENST00000238616 UBXN10Q96LJ8 280 aa12.77□□□□□ -0.37
NEK9-201ENST00000238616 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.77□□□□□ -0.37
NEK9-201ENST00000238616 SOCS2O14508 198 aa12.77□□□□□ -0.37
NEK9-201ENST00000238616 CFHP08603 1231 aa12.77□□□□□ -0.37
NEK9-201ENST00000238616 RAP2AP10114 183 aa12.77□□□□□ -0.37
NEK9-201ENST00000238616 FOSL1P15407 271 aa12.77□□□□□ -0.37
NEK9-201ENST00000238616 FKBP1BP68106 108 aa12.77□□□□□ -0.37
NEK9-201ENST00000238616 BATFQ16520 125 aa12.77□□□□□ -0.37
NEK9-201ENST00000238616 NT5DC1Q5TFE4 455 aa12.77□□□□□ -0.37
NEK9-201ENST00000238616 HDAC2Q92769 488 aaKnown RBP12.77□□□□□ -0.37
NEK9-201ENST00000238616 GPR34Q9UPC5 381 aa12.77□□□□□ -0.37
NEK9-201ENST00000238616 HEMK1Q9Y5R4 338 aaPredicted RBP12.77□□□□□ -0.37
NEK9-201ENST00000238616 RNF215Q9Y6U7 377 aa12.77□□□□□ -0.37
NEK9-201ENST00000238616 A8MVJ9 347 aa12.77□□□□□ -0.37
NEK9-201ENST00000238616 S1PR1P21453 382 aa12.77□□□□□ -0.37
NEK9-201ENST00000238616 ZNF542PQ5EBM4 170 aa12.77□□□□□ -0.37
NEK9-201ENST00000238616 VHLLQ6RSH7 139 aa12.77□□□□□ -0.37
NEK9-201ENST00000238616 DBF4BQ8NFT6 615 aa12.77□□□□□ -0.37
NEK9-201ENST00000238616 MYRFLQ96LU7 910 aa12.77□□□□□ -0.37
NEK9-201ENST00000238616 POLDIP3Q9BY77 421 aaKnown RBP12.77□□□□□ -0.37
NEK9-201ENST00000238616 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.77□□□□□ -0.37
NEK9-201ENST00000238616 OR6C74A6NCV1 312 aa12.76□□□□□ -0.37
NEK9-201ENST00000238616 YBEYP58557 167 aaPredicted RBP12.76□□□□□ -0.37
NEK9-201ENST00000238616 LGI4Q8N135 537 aa12.76□□□□□ -0.37
NEK9-201ENST00000238616 SNIP1Q8TAD8 396 aaKnown RBP12.76□□□□□ -0.37
NEK9-201ENST00000238616 PGAM5Q96HS1 289 aa12.76□□□□□ -0.37
NEK9-201ENST00000238616 ZNF442Q9H7R0 627 aa12.76□□□□□ -0.37
NEK9-201ENST00000238616 ZDHHC3Q9NYG2 299 aa12.76□□□□□ -0.37
NEK9-201ENST00000238616 ESR1P03372 595 aa12.76□□□□□ -0.37
NEK9-201ENST00000238616 CDH1P12830 882 aa12.76□□□□□ -0.37
NEK9-201ENST00000238616 CCDC58Q4VC31 144 aa12.76□□□□□ -0.37
NEK9-201ENST00000238616 TPRG1LQ5T0D9 272 aa12.76□□□□□ -0.37
NEK9-201ENST00000238616 C1orf52Q8N6N3 182 aaKnown RBP12.76□□□□□ -0.37
NEK9-201ENST00000238616 ZNF99A8MXY4 864 aaPredicted RBP12.76□□□□□ -0.37
NEK9-201ENST00000238616 ATE1O95260 518 aa12.76□□□□□ -0.37
NEK9-201ENST00000238616 EPHA1P21709 976 aa12.76□□□□□ -0.37
NEK9-201ENST00000238616 OGDHQ02218 1023 aa12.76□□□□□ -0.37
NEK9-201ENST00000238616 NTRK2Q16620 822 aa12.76□□□□□ -0.37
NEK9-201ENST00000238616 HAGHLQ6PII5 290 aaPredicted RBP12.76□□□□□ -0.37
NEK9-201ENST00000238616 PAQR3Q6TCH7 311 aa12.76□□□□□ -0.37
NEK9-201ENST00000238616 GPR174Q9BXC1 333 aa12.76□□□□□ -0.37
NEK9-201ENST00000238616 LOC100130705A0A1B0GUX0 176 aa12.76□□□□□ -0.37
NEK9-201ENST00000238616 H3BNX3 289 aa12.76□□□□□ -0.37
NEK9-201ENST00000238616 I3L521 148 aa12.76□□□□□ -0.37
NEK9-201ENST00000238616 LSSP48449 732 aa12.76□□□□□ -0.37
NEK9-201ENST00000238616 RPS3AP61247 264 aaKnown RBP12.76□□□□□ -0.37
NEK9-201ENST00000238616 KIAA0895LQ68EN5 471 aa12.76□□□□□ -0.37
NEK9-201ENST00000238616 PHC2Q8IXK0 858 aa12.76□□□□□ -0.37
NEK9-201ENST00000238616 DOK4Q8TEW6 326 aa12.76□□□□□ -0.37
NEK9-201ENST00000238616 IRGQQ8WZA9 623 aa12.76□□□□□ -0.37
NEK9-201ENST00000238616 EPHA6Q9UF33 1036 aa12.76□□□□□ -0.37
NEK9-201ENST00000238616 DHDHQ9UQ10 334 aa12.76□□□□□ -0.37
NEK9-201ENST00000238616 SQORQ9Y6N5 450 aa12.76□□□□□ -0.37
NEK9-201ENST00000238616 RTCAO00442 366 aaKnown RBP12.76□□□□□ -0.37
NEK9-201ENST00000238616 EPCAMP16422 314 aa12.76□□□□□ -0.37
NEK9-201ENST00000238616 CDKN2BP42772 138 aa12.76□□□□□ -0.37
NEK9-201ENST00000238616 HSD11B2P80365 405 aa12.76□□□□□ -0.37
NEK9-201ENST00000238616 DSC3Q14574 896 aa12.76□□□□□ -0.37
NEK9-201ENST00000238616 ZNF517Q6ZMY9 492 aaPredicted RBP12.76□□□□□ -0.37
NEK9-201ENST00000238616 MYOFQ9NZM1 2061 aa12.76□□□□□ -0.37
NEK9-201ENST00000238616 FAM237AA0A1B0GTK4 181 aa12.76□□□□□ -0.37
NEK9-201ENST00000238616 CILPO75339 1184 aa12.76□□□□□ -0.37
NEK9-201ENST00000238616 AKR1C4P17516 323 aa12.76□□□□□ -0.37
NEK9-201ENST00000238616 MSR1P21757 451 aa12.76□□□□□ -0.37
NEK9-201ENST00000238616 PRKAR1BP31321 381 aa12.76□□□□□ -0.37
NEK9-201ENST00000238616 PPA1Q15181 289 aa12.76□□□□□ -0.37
NEK9-201ENST00000238616 ZNF423Q2M1K9 1284 aa12.76□□□□□ -0.37
NEK9-201ENST00000238616 TMEM44Q2T9K0 475 aa12.76□□□□□ -0.37
NEK9-201ENST00000238616 TSACCQ96A04 125 aaPredicted RBP12.76□□□□□ -0.37
NEK9-201ENST00000238616 KCNK13Q9HB14 408 aa12.76□□□□□ -0.37
NEK9-201ENST00000238616 PDE7BQ9NP56 450 aa12.76□□□□□ -0.37
NEK9-201ENST00000238616 SLC39A1Q9NY26 324 aa12.76□□□□□ -0.37
NEK9-201ENST00000238616 PCDHB10Q9UN67 800 aa12.76□□□□□ -0.37
NEK9-201ENST00000238616 ABHD15Q6UXT9 468 aa12.75□□□□□ -0.37
NEK9-201ENST00000238616 ZNF584Q8IVC4 421 aa12.75□□□□□ -0.37
NEK9-201ENST00000238616 SLC15A3Q8IY34 581 aa12.75□□□□□ -0.37
NEK9-201ENST00000238616 ROPN1LQ96C74 230 aa12.75□□□□□ -0.37
NEK9-201ENST00000238616 SLC32A1Q9H598 525 aa12.75□□□□□ -0.37
NEK9-201ENST00000238616 YLPM1P49750 1951 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms