RNA–Protein interactions for RNA: ENST00000238112.7

CPSF3-201, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-201ENST00000238112 LAS2Q8IYD9 372 aa17.92■□□□□ 0.46
CPSF3-201ENST00000238112 CFAP206Q8IYR0 622 aa17.92■□□□□ 0.46
CPSF3-201ENST00000238112 B3GNT7Q8NFL0 401 aa17.92■□□□□ 0.46
CPSF3-201ENST00000238112 C9orf43Q8TAL5 461 aaPredicted RBP17.92■□□□□ 0.46
CPSF3-201ENST00000238112 TMEM121BQ9BXQ6 578 aaPredicted RBP17.92■□□□□ 0.46
CPSF3-201ENST00000238112 NXF2Q9GZY0 626 aaKnown RBP17.92■□□□□ 0.46
CPSF3-201ENST00000238112 SPHK2Q9NRA0 654 aa17.92■□□□□ 0.46
CPSF3-201ENST00000238112 CREBZFQ9NS37 354 aa17.92■□□□□ 0.46
CPSF3-201ENST00000238112 ACER3Q9NUN7 267 aa17.92■□□□□ 0.46
CPSF3-201ENST00000238112 UGT2A1Q9Y4X1 527 aa17.92■□□□□ 0.46
CPSF3-201ENST00000238112 PCDHGA3Q9Y5H0 932 aa17.92■□□□□ 0.46
CPSF3-201ENST00000238112 A0A1W2PRB8 838 aa17.91■□□□□ 0.46
CPSF3-201ENST00000238112 KLK1P06870 262 aa17.91■□□□□ 0.46
CPSF3-201ENST00000238112 CCR2P41597 374 aa17.91■□□□□ 0.46
CPSF3-201ENST00000238112 MAGEA10P43363 369 aaPredicted RBP17.91■□□□□ 0.46
CPSF3-201ENST00000238112 MPEG1Q2M385 716 aa17.91■□□□□ 0.46
CPSF3-201ENST00000238112 IER5LQ5T953 404 aa17.91■□□□□ 0.46
CPSF3-201ENST00000238112 FAM71E1Q6IPT2 247 aa17.91■□□□□ 0.46
CPSF3-201ENST00000238112 ERAP2Q6P179 960 aa17.91■□□□□ 0.46
CPSF3-201ENST00000238112 PNCKQ6P2M8 343 aa17.91■□□□□ 0.46
CPSF3-201ENST00000238112 TAGAPQ8N103 731 aa17.91■□□□□ 0.46
CPSF3-201ENST00000238112 WDR34Q96EX3 536 aa17.91■□□□□ 0.46
CPSF3-201ENST00000238112 MAPKAP1Q9BPZ7 522 aa17.91■□□□□ 0.46
CPSF3-201ENST00000238112 CDADC1Q9BWV3 514 aa17.91■□□□□ 0.46
CPSF3-201ENST00000238112 RNF167Q9H6Y7 350 aa17.91■□□□□ 0.46
CPSF3-201ENST00000238112 IFT52Q9Y366 437 aa17.91■□□□□ 0.46
CPSF3-201ENST00000238112 DENND4CQ5VZ89 1909 aa17.91■□□□□ 0.46
CPSF3-201ENST00000238112 TRBC2A0A5B9 178 aa17.9■□□□□ 0.46
CPSF3-201ENST00000238112 EFCAB10A6NFE3 127 aa17.9■□□□□ 0.46
CPSF3-201ENST00000238112 DLGAP3O95886 979 aa17.9■□□□□ 0.46
CPSF3-201ENST00000238112 DEFB103AP81534 67 aa17.9■□□□□ 0.46
CPSF3-201ENST00000238112 MEF2AQ02078 507 aaPredicted RBP17.9■□□□□ 0.46
CPSF3-201ENST00000238112 PTGES3Q15185 160 aaKnown RBP17.9■□□□□ 0.46
CPSF3-201ENST00000238112 SOWAHCQ53LP3 525 aaPredicted RBP17.9■□□□□ 0.46
CPSF3-201ENST00000238112 LIPIQ6XZB0 460 aa17.9■□□□□ 0.46
CPSF3-201ENST00000238112 AQP11Q8NBQ7 271 aa17.9■□□□□ 0.46
CPSF3-201ENST00000238112 FBXO15Q8NCQ5 510 aaPredicted RBP17.9■□□□□ 0.46
CPSF3-201ENST00000238112 CENPOQ9BU64 300 aa17.9■□□□□ 0.46
CPSF3-201ENST00000238112 WRAP53Q9BUR4 548 aaKnown RBP17.9■□□□□ 0.46
CPSF3-201ENST00000238112 ROGDIQ9GZN7 287 aa17.9■□□□□ 0.46
CPSF3-201ENST00000238112 MTG2Q9H4K7 406 aa17.9■□□□□ 0.46
CPSF3-201ENST00000238112 HCFC1R1Q9NWW0 138 aa17.9■□□□□ 0.46
CPSF3-201ENST00000238112 GPC6Q9Y625 555 aaPredicted RBP17.9■□□□□ 0.46
CPSF3-201ENST00000238112 ENPP4Q9Y6X5 453 aa17.9■□□□□ 0.46
CPSF3-201ENST00000238112 MED26O95402 600 aa17.9■□□□□ 0.46
CPSF3-201ENST00000238112 ARAFP10398 606 aa17.9■□□□□ 0.46
CPSF3-201ENST00000238112 RHCEP18577 417 aa17.9■□□□□ 0.46
CPSF3-201ENST00000238112 PPM1AP35813 382 aa17.9■□□□□ 0.46
CPSF3-201ENST00000238112 MMP12P39900 470 aa17.9■□□□□ 0.46
CPSF3-201ENST00000238112 PRKCDQ05655 676 aa17.9■□□□□ 0.46
CPSF3-201ENST00000238112 IRF3Q14653 427 aa17.9■□□□□ 0.46
CPSF3-201ENST00000238112 LY6G5CQ5SRR4 150 aa17.9■□□□□ 0.46
CPSF3-201ENST00000238112 LMNTD1Q8N9Z9 388 aa17.9■□□□□ 0.46
CPSF3-201ENST00000238112 KREMEN2Q8NCW0 462 aa17.9■□□□□ 0.46
CPSF3-201ENST00000238112 SLC5A11Q8WWX8 675 aa17.9■□□□□ 0.46
CPSF3-201ENST00000238112 MTERF3Q96E29 417 aa17.9■□□□□ 0.46
CPSF3-201ENST00000238112 ZBP1Q9H171 429 aa17.9■□□□□ 0.46
CPSF3-201ENST00000238112 LINC00597Q9H2U6 94 aa17.9■□□□□ 0.46
CPSF3-201ENST00000238112 RC3H2Q9HBD1 1191 aaKnown RBP17.9■□□□□ 0.46
CPSF3-201ENST00000238112 TMEM165Q9HC07 324 aa17.9■□□□□ 0.46
CPSF3-201ENST00000238112 MIEF1Q9NQG6 463 aa17.9■□□□□ 0.46
CPSF3-201ENST00000238112 KLK4Q9Y5K2 254 aa17.9■□□□□ 0.46
CPSF3-201ENST00000238112 PEX16Q9Y5Y5 336 aa17.9■□□□□ 0.46
CPSF3-201ENST00000238112 CFAP20Q9Y6A4 193 aaKnown RBP17.9■□□□□ 0.46
CPSF3-201ENST00000238112 CARNS1A5YM72 827 aa17.89■□□□□ 0.46
CPSF3-201ENST00000238112 MPZL2O60487 215 aa17.89■□□□□ 0.46
CPSF3-201ENST00000238112 IFNW1P05000 195 aa17.89■□□□□ 0.46
CPSF3-201ENST00000238112 SOX6P35712 828 aa17.89■□□□□ 0.46
CPSF3-201ENST00000238112 LIMS1P48059 325 aa17.89■□□□□ 0.46
CPSF3-201ENST00000238112 HMGA2P52926 109 aa17.89■□□□□ 0.46
CPSF3-201ENST00000238112 PCBP3P57721 371 aaKnown RBP17.89■□□□□ 0.46
CPSF3-201ENST00000238112 GRIN2CQ14957 1233 aa17.89■□□□□ 0.46
CPSF3-201ENST00000238112 MED22Q15528 200 aa17.89■□□□□ 0.46
CPSF3-201ENST00000238112 PTCHD4Q6ZW05 846 aa17.89■□□□□ 0.46
CPSF3-201ENST00000238112 TRAPPC5Q8IUR0 188 aa17.89■□□□□ 0.46
CPSF3-201ENST00000238112 SLC30A8Q8IWU4 369 aa17.89■□□□□ 0.46
CPSF3-201ENST00000238112 METTL4Q8N3J2 472 aa17.89■□□□□ 0.46
CPSF3-201ENST00000238112 PARP16Q8N5Y8 322 aa17.89■□□□□ 0.46
CPSF3-201ENST00000238112 OR9A1PQ8NGU1 263 aa17.89■□□□□ 0.46
CPSF3-201ENST00000238112 MRGPRX3Q96LB0 322 aa17.89■□□□□ 0.46
CPSF3-201ENST00000238112 Q96MT0 163 aa17.89■□□□□ 0.46
CPSF3-201ENST00000238112 SGPP1Q9BX95 441 aa17.89■□□□□ 0.46
CPSF3-201ENST00000238112 CLN6Q9NWW5 311 aa17.89■□□□□ 0.46
CPSF3-201ENST00000238112 TAS2R16Q9NYV7 291 aa17.89■□□□□ 0.46
CPSF3-201ENST00000238112 GULP1Q9UBP9 304 aa17.89■□□□□ 0.46
CPSF3-201ENST00000238112 ITGB1BP2Q9UKP3 347 aa17.89■□□□□ 0.46
CPSF3-201ENST00000238112 ITM2BQ9Y287 266 aa17.89■□□□□ 0.46
CPSF3-201ENST00000238112 SH3D21A4FU49 640 aa17.89■□□□□ 0.45
CPSF3-201ENST00000238112 IL3P08700 152 aa17.89■□□□□ 0.45
CPSF3-201ENST00000238112 FUT4P22083 530 aa17.89■□□□□ 0.45
CPSF3-201ENST00000238112 CBLP22681 906 aa17.89■□□□□ 0.45
CPSF3-201ENST00000238112 CRISP3P54108 245 aa17.89■□□□□ 0.45
CPSF3-201ENST00000238112 UGT2B15P54855 530 aa17.89■□□□□ 0.45
CPSF3-201ENST00000238112 TPTEP56180 551 aa17.89■□□□□ 0.45
CPSF3-201ENST00000238112 DSTNP60981 165 aa17.89■□□□□ 0.45
CPSF3-201ENST00000238112 TIMM50Q3ZCQ8 353 aa17.89■□□□□ 0.45
CPSF3-201ENST00000238112 NXPE4Q6UWF7 544 aa17.89■□□□□ 0.45
CPSF3-201ENST00000238112 ANKRD33Q7Z3H0 272 aa17.89■□□□□ 0.45
CPSF3-201ENST00000238112 SLC44A2Q8IWA5 706 aaPredicted RBP17.89■□□□□ 0.45
CPSF3-201ENST00000238112 GPR65Q8IYL9 337 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms