RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 CAMKVQ8NCB2 501 aa17.65■□□□□ 0.42
SNX17-201ENST00000233575 GAL3ST3Q96A11 431 aa17.65■□□□□ 0.42
SNX17-201ENST00000233575 TMEM125Q96AQ2 219 aa17.65■□□□□ 0.42
SNX17-201ENST00000233575 CGREF1Q99674 301 aa17.65■□□□□ 0.42
SNX17-201ENST00000233575 TBCDQ9BTW9 1192 aa17.65■□□□□ 0.42
SNX17-201ENST00000233575 POMPQ9Y244 141 aa17.65■□□□□ 0.42
SNX17-201ENST00000233575 SPTBP11277 2137 aa17.65■□□□□ 0.42
SNX17-201ENST00000233575 WASHC1A8K0Z3 465 aa17.65■□□□□ 0.42
SNX17-201ENST00000233575 DUX1O43812 170 aa17.65■□□□□ 0.42
SNX17-201ENST00000233575 DNAJB6O75190 326 aa17.65■□□□□ 0.42
SNX17-201ENST00000233575 FAM58BPP0C7Q3 252 aa17.65■□□□□ 0.42
SNX17-201ENST00000233575 SMIM10L1P0DMW3 83 aa17.65■□□□□ 0.42
SNX17-201ENST00000233575 ALDH9A1P49189 494 aa17.65■□□□□ 0.42
SNX17-201ENST00000233575 FOXM1Q08050 763 aa17.65■□□□□ 0.42
SNX17-201ENST00000233575 NR0B2Q15466 257 aa17.65■□□□□ 0.42
SNX17-201ENST00000233575 C1orf146Q5VVC0 180 aa17.65■□□□□ 0.42
SNX17-201ENST00000233575 IKBIPQ70UQ0 350 aa17.65■□□□□ 0.42
SNX17-201ENST00000233575 PRSS41Q7RTY9 318 aa17.65■□□□□ 0.42
SNX17-201ENST00000233575 MCATQ8IVS2 390 aaKnown RBP17.65■□□□□ 0.42
SNX17-201ENST00000233575 STARD8Q92502 1023 aa17.65■□□□□ 0.42
SNX17-201ENST00000233575 PPCDCQ96CD2 204 aa17.65■□□□□ 0.42
SNX17-201ENST00000233575 AURKBQ96GD4 344 aaPredicted RBP17.65■□□□□ 0.42
SNX17-201ENST00000233575 ZDHHC12Q96GR4 267 aa17.65■□□□□ 0.42
SNX17-201ENST00000233575 SMIM10Q96HG1 83 aa17.65■□□□□ 0.42
SNX17-201ENST00000233575 KCNH6Q9H252 994 aa17.65■□□□□ 0.42
SNX17-201ENST00000233575 IKZF5Q9H5V7 419 aa17.65■□□□□ 0.42
SNX17-201ENST00000233575 CD300AQ9UGN4 299 aa17.65■□□□□ 0.42
SNX17-201ENST00000233575 MAN2B2Q9Y2E5 1009 aa17.65■□□□□ 0.42
SNX17-201ENST00000233575 ATG4BQ9Y4P1 393 aa17.65■□□□□ 0.42
SNX17-201ENST00000233575 MGRN1O60291 552 aa17.64■□□□□ 0.41
SNX17-201ENST00000233575 SYPP08247 313 aa17.64■□□□□ 0.41
SNX17-201ENST00000233575 HOXB9P17482 250 aaPredicted RBP17.64■□□□□ 0.41
SNX17-201ENST00000233575 ATXN3P54252 364 aaPredicted RBP17.64■□□□□ 0.41
SNX17-201ENST00000233575 MS4A2Q01362 244 aa17.64■□□□□ 0.41
SNX17-201ENST00000233575 DEFB134Q4QY38 66 aa17.64■□□□□ 0.41
SNX17-201ENST00000233575 SNAP47Q5SQN1 464 aa17.64■□□□□ 0.41
SNX17-201ENST00000233575 SRFBP1Q8NEF9 429 aaKnown RBP17.64■□□□□ 0.41
SNX17-201ENST00000233575 TCTN2Q96GX1 697 aa17.64■□□□□ 0.41
SNX17-201ENST00000233575 ITCHQ96J02 903 aa17.64■□□□□ 0.41
SNX17-201ENST00000233575 CCDC3Q9BQI4 270 aa17.64■□□□□ 0.41
SNX17-201ENST00000233575 NUDT22Q9BRQ3 303 aa17.64■□□□□ 0.41
SNX17-201ENST00000233575 RMND5AQ9H871 391 aa17.64■□□□□ 0.41
SNX17-201ENST00000233575 MIEF1Q9NQG6 463 aa17.64■□□□□ 0.41
SNX17-201ENST00000233575 FBXW2Q9UKT8 454 aa17.64■□□□□ 0.41
SNX17-201ENST00000233575 ASB4Q9Y574 426 aa17.64■□□□□ 0.41
SNX17-201ENST00000233575 PCDHB14Q9Y5E9 798 aa17.64■□□□□ 0.41
SNX17-201ENST00000233575 TRBV5-3A0A0A0MS03 114 aa17.64■□□□□ 0.41
SNX17-201ENST00000233575 CIB2O75838 187 aa17.64■□□□□ 0.41
SNX17-201ENST00000233575 NPPAP01160 153 aa17.64■□□□□ 0.41
SNX17-201ENST00000233575 DDCP20711 480 aa17.64■□□□□ 0.41
SNX17-201ENST00000233575 GABRA4P48169 554 aa17.64■□□□□ 0.41
SNX17-201ENST00000233575 SEPHS1P49903 392 aa17.64■□□□□ 0.41
SNX17-201ENST00000233575 GPLD1P80108 840 aa17.64■□□□□ 0.41
SNX17-201ENST00000233575 KCNAB1Q14722 419 aa17.64■□□□□ 0.41
SNX17-201ENST00000233575 SLC9A5Q14940 896 aa17.64■□□□□ 0.41
SNX17-201ENST00000233575 WASHC2DQ5SRD0 308 aa17.64■□□□□ 0.41
SNX17-201ENST00000233575 NDUFAF5Q5TEU4 345 aa17.64■□□□□ 0.41
SNX17-201ENST00000233575 MRM1Q6IN84 353 aaKnown RBP17.64■□□□□ 0.41
SNX17-201ENST00000233575 TMEM214Q6NUQ4 689 aaKnown RBP17.64■□□□□ 0.41
SNX17-201ENST00000233575 PRMT9Q6P2P2 845 aa17.64■□□□□ 0.41
SNX17-201ENST00000233575 TMPRSS9Q7Z410 1059 aa17.64■□□□□ 0.41
SNX17-201ENST00000233575 NET1Q7Z628 596 aaPredicted RBP17.64■□□□□ 0.41
SNX17-201ENST00000233575 DTWD1Q8N5C7 304 aa17.64■□□□□ 0.41
SNX17-201ENST00000233575 FAM181AQ8N9Y4 354 aa17.64■□□□□ 0.41
SNX17-201ENST00000233575 PRPF18Q99633 342 aaKnown RBP17.64■□□□□ 0.41
SNX17-201ENST00000233575 PCDHAC1Q9H158 963 aa17.64■□□□□ 0.41
SNX17-201ENST00000233575 FAM120CQ9NX05 1096 aaKnown RBP17.64■□□□□ 0.41
SNX17-201ENST00000233575 SOHLH2Q9NX45 425 aa17.64■□□□□ 0.41
SNX17-201ENST00000233575 USP22Q9UPT9 525 aa17.64■□□□□ 0.41
SNX17-201ENST00000233575 A0A1W2PR48 441 aa17.63■□□□□ 0.41
SNX17-201ENST00000233575 ZNF860A6NHJ4 632 aa17.63■□□□□ 0.41
SNX17-201ENST00000233575 GLOD5A6NK44 160 aa17.63■□□□□ 0.41
SNX17-201ENST00000233575 RFXANKO14593 260 aa17.63■□□□□ 0.41
SNX17-201ENST00000233575 CPSF4O95639 269 aaKnown RBP17.63■□□□□ 0.41
SNX17-201ENST00000233575 ME2P23368 584 aa17.63■□□□□ 0.41
SNX17-201ENST00000233575 LRIF1Q5T3J3 769 aa17.63■□□□□ 0.41
SNX17-201ENST00000233575 PRR23CQ6ZRP0 262 aa17.63■□□□□ 0.41
SNX17-201ENST00000233575 MSANTD1Q6ZTZ1 278 aa17.63■□□□□ 0.41
SNX17-201ENST00000233575 R3HCC1LQ7Z5L2 792 aaKnown RBP17.63■□□□□ 0.41
SNX17-201ENST00000233575 ZCCHC7Q8N3Z6 543 aaKnown RBP17.63■□□□□ 0.41
SNX17-201ENST00000233575 LOXL4Q96JB6 756 aa17.63■□□□□ 0.41
SNX17-201ENST00000233575 ANKRD27Q96NW4 1050 aa17.63■□□□□ 0.41
SNX17-201ENST00000233575 PANX1Q96RD7 426 aa17.63■□□□□ 0.41
SNX17-201ENST00000233575 COPS7BQ9H9Q2 264 aaPredicted RBP17.63■□□□□ 0.41
SNX17-201ENST00000233575 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.63■□□□□ 0.41
SNX17-201ENST00000233575 ATXN7L1Q9ULK2 861 aaPredicted RBP17.63■□□□□ 0.41
SNX17-201ENST00000233575 MAPRE3Q9UPY8 281 aa17.63■□□□□ 0.41
SNX17-201ENST00000233575 A0A096LPI6 279 aa17.62■□□□□ 0.41
SNX17-201ENST00000233575 PRSS51A0A1B0GVH4 220 aa17.62■□□□□ 0.41
SNX17-201ENST00000233575 EME2A4GXA9 379 aaPredicted RBP17.62■□□□□ 0.41
SNX17-201ENST00000233575 A8MU76 341 aa17.62■□□□□ 0.41
SNX17-201ENST00000233575 TNFRSF10AO00220 468 aa17.62■□□□□ 0.41
SNX17-201ENST00000233575 PCDHGA12O60330 932 aa17.62■□□□□ 0.41
SNX17-201ENST00000233575 SCELO95171 688 aa17.62■□□□□ 0.41
SNX17-201ENST00000233575 IL1RNP18510 177 aa17.62■□□□□ 0.41
SNX17-201ENST00000233575 MLLT3P42568 568 aaPredicted RBP17.62■□□□□ 0.41
SNX17-201ENST00000233575 ARFIP1P53367 373 aa17.62■□□□□ 0.41
SNX17-201ENST00000233575 OLR1P78380 273 aa17.62■□□□□ 0.41
SNX17-201ENST00000233575 HEPACAMQ14CZ8 416 aa17.62■□□□□ 0.41
SNX17-201ENST00000233575 SAMD4BQ5PRF9 694 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms