RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 CADM1Q9BY67 442 aaKnown RBP12.77□□□□□ -0.36
COL1A1-201ENST00000225964 DPAGT1Q9H3H5 408 aa12.77□□□□□ -0.36
COL1A1-201ENST00000225964 RMI1Q9H9A7 625 aa12.77□□□□□ -0.36
COL1A1-201ENST00000225964 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.77□□□□□ -0.36
COL1A1-201ENST00000225964 MAN2B1O00754 1011 aa12.77□□□□□ -0.36
COL1A1-201ENST00000225964 TSPAN4O14817 238 aa12.77□□□□□ -0.36
COL1A1-201ENST00000225964 COL9A2Q14055 689 aaPredicted RBP12.77□□□□□ -0.36
COL1A1-201ENST00000225964 VASH1Q7L8A9 365 aaPredicted RBP12.77□□□□□ -0.36
COL1A1-201ENST00000225964 MINDY2Q8NBR6 621 aa12.77□□□□□ -0.36
COL1A1-201ENST00000225964 NSMAFQ92636 917 aa12.77□□□□□ -0.36
COL1A1-201ENST00000225964 USB1Q9BQ65 265 aaKnown RBP12.77□□□□□ -0.36
COL1A1-201ENST00000225964 ITPAQ9BY32 194 aa12.77□□□□□ -0.36
COL1A1-201ENST00000225964 FNIP2Q9P278 1114 aa12.77□□□□□ -0.36
COL1A1-201ENST00000225964 ATXN7L1Q9ULK2 861 aaPredicted RBP12.77□□□□□ -0.36
COL1A1-201ENST00000225964 M0QX08 132 aa12.77□□□□□ -0.37
COL1A1-201ENST00000225964 CDRT1O95170 752 aa12.77□□□□□ -0.37
COL1A1-201ENST00000225964 OR12D1P0DN82 309 aa12.77□□□□□ -0.37
COL1A1-201ENST00000225964 CHRM1P11229 460 aaPredicted RBP12.77□□□□□ -0.37
COL1A1-201ENST00000225964 G6PDP11413 515 aa12.77□□□□□ -0.37
COL1A1-201ENST00000225964 AOC1P19801 751 aa12.77□□□□□ -0.37
COL1A1-201ENST00000225964 MAPK3P27361 379 aaPredicted RBP12.77□□□□□ -0.37
COL1A1-201ENST00000225964 LBX1P52954 281 aa12.77□□□□□ -0.37
COL1A1-201ENST00000225964 CPNE8Q86YQ8 564 aa12.77□□□□□ -0.37
COL1A1-201ENST00000225964 ERI1Q8IV48 349 aaKnown RBP12.77□□□□□ -0.37
COL1A1-201ENST00000225964 OR13C3Q8NGS6 347 aa12.77□□□□□ -0.37
COL1A1-201ENST00000225964 KCNK13Q9HB14 408 aa12.77□□□□□ -0.37
COL1A1-201ENST00000225964 AJAP1Q9UKB5 411 aaPredicted RBP12.77□□□□□ -0.37
COL1A1-201ENST00000225964 CICQ96RK0 1608 aaPredicted RBP12.77□□□□□ -0.37
COL1A1-201ENST00000225964 FEZF1A0PJY2 475 aa12.77□□□□□ -0.37
COL1A1-201ENST00000225964 SMIM30A4D0T7 59 aa12.77□□□□□ -0.37
COL1A1-201ENST00000225964 PRAMEF11O60813 436 aa12.77□□□□□ -0.37
COL1A1-201ENST00000225964 EBLN1P0CF75 366 aa12.77□□□□□ -0.37
COL1A1-201ENST00000225964 UQCRC2P22695 453 aa12.77□□□□□ -0.37
COL1A1-201ENST00000225964 LMAN2Q12907 356 aa12.77□□□□□ -0.37
COL1A1-201ENST00000225964 LRIT3Q3SXY7 679 aa12.77□□□□□ -0.37
COL1A1-201ENST00000225964 ZNF296Q8WUU4 475 aaPredicted RBP12.77□□□□□ -0.37
COL1A1-201ENST00000225964 TMEM168Q9H0V1 697 aa12.77□□□□□ -0.37
COL1A1-201ENST00000225964 DNAJB4Q9UDY4 337 aa12.77□□□□□ -0.37
COL1A1-201ENST00000225964 DLGAP4Q9Y2H0 992 aa12.77□□□□□ -0.37
COL1A1-201ENST00000225964 IGKV6D-41A0A0C4DH26 115 aa12.77□□□□□ -0.37
COL1A1-201ENST00000225964 MATN2O00339 956 aa12.77□□□□□ -0.37
COL1A1-201ENST00000225964 AHSGP02765 367 aa12.77□□□□□ -0.37
COL1A1-201ENST00000225964 ERCC1P07992 297 aaPredicted RBP12.77□□□□□ -0.37
COL1A1-201ENST00000225964 STK19P49842 368 aaPredicted RBP12.77□□□□□ -0.37
COL1A1-201ENST00000225964 SLC26A5P58743 744 aa12.77□□□□□ -0.37
COL1A1-201ENST00000225964 MPP2Q14168 576 aa12.77□□□□□ -0.37
COL1A1-201ENST00000225964 PLEKHS1Q5SXH7 462 aa12.77□□□□□ -0.37
COL1A1-201ENST00000225964 NLGN4YQ8NFZ3 816 aaPredicted RBP12.77□□□□□ -0.37
COL1A1-201ENST00000225964 MOAP1Q96BY2 351 aa12.77□□□□□ -0.37
COL1A1-201ENST00000225964 IGSF21Q96ID5 467 aa12.77□□□□□ -0.37
COL1A1-201ENST00000225964 TMEM109Q9BVC6 243 aa12.77□□□□□ -0.37
COL1A1-201ENST00000225964 ADAM18Q9Y3Q7 739 aa12.77□□□□□ -0.37
COL1A1-201ENST00000225964 PDLIM1O00151 329 aa12.77□□□□□ -0.37
COL1A1-201ENST00000225964 SEC14L5O43304 696 aa12.77□□□□□ -0.37
COL1A1-201ENST00000225964 JUPP14923 745 aa12.77□□□□□ -0.37
COL1A1-201ENST00000225964 GRK1Q15835 563 aa12.77□□□□□ -0.37
COL1A1-201ENST00000225964 LPAL2Q16609 132 aa12.77□□□□□ -0.37
COL1A1-201ENST00000225964 RAB8BQ92930 207 aa12.77□□□□□ -0.37
COL1A1-201ENST00000225964 S100A16Q96FQ6 103 aaKnown RBP12.77□□□□□ -0.37
COL1A1-201ENST00000225964 NELFAQ9H3P2 528 aa12.77□□□□□ -0.37
COL1A1-201ENST00000225964 ZNF701Q9NV72 531 aaPredicted RBP12.77□□□□□ -0.37
COL1A1-201ENST00000225964 FAM120CQ9NX05 1096 aaKnown RBP12.77□□□□□ -0.37
COL1A1-201ENST00000225964 APOBEC3BQ9UH17 382 aaKnown RBP12.77□□□□□ -0.37
COL1A1-201ENST00000225964 MLXQ9UH92 298 aa12.77□□□□□ -0.37
COL1A1-201ENST00000225964 SH2B3Q9UQQ2 575 aa12.77□□□□□ -0.37
COL1A1-201ENST00000225964 SDC3O75056 442 aa12.76□□□□□ -0.37
COL1A1-201ENST00000225964 PLATP00750 562 aa12.76□□□□□ -0.37
COL1A1-201ENST00000225964 DLDP09622 509 aaKnown RBP12.76□□□□□ -0.37
COL1A1-201ENST00000225964 HNF1BP35680 557 aa12.76□□□□□ -0.37
COL1A1-201ENST00000225964 KCNC3Q14003 757 aa12.76□□□□□ -0.37
COL1A1-201ENST00000225964 CHRFAM7AQ494W8 412 aa12.76□□□□□ -0.37
COL1A1-201ENST00000225964 TRAPPC6BQ86SZ2 158 aa12.76□□□□□ -0.37
COL1A1-201ENST00000225964 TWNKQ96RR1 684 aa12.76□□□□□ -0.37
COL1A1-201ENST00000225964 NUDT15Q9NV35 164 aa12.76□□□□□ -0.37
COL1A1-201ENST00000225964 NUFIP1Q9UHK0 495 aaKnown RBP12.76□□□□□ -0.37
COL1A1-201ENST00000225964 CMAHPQ9Y471 501 aa12.76□□□□□ -0.37
COL1A1-201ENST00000225964 GGT5P36269 586 aa12.76□□□□□ -0.37
COL1A1-201ENST00000225964 MALLQ13021 153 aa12.76□□□□□ -0.37
COL1A1-201ENST00000225964 SLAMF1Q13291 335 aa12.76□□□□□ -0.37
COL1A1-201ENST00000225964 NUP43Q8NFH3 380 aa12.76□□□□□ -0.37
COL1A1-201ENST00000225964 C15orf40Q8WUR7 153 aa12.76□□□□□ -0.37
COL1A1-201ENST00000225964 MAPKAP1Q9BPZ7 522 aa12.76□□□□□ -0.37
COL1A1-201ENST00000225964 DNAJC27Q9NZQ0 273 aa12.76□□□□□ -0.37
COL1A1-201ENST00000225964 BHMG1C9JSJ3 638 aaPredicted RBP12.76□□□□□ -0.37
COL1A1-201ENST00000225964 RAD51DO75771 328 aa12.76□□□□□ -0.37
COL1A1-201ENST00000225964 GJB5O95377 273 aa12.76□□□□□ -0.37
COL1A1-201ENST00000225964 CSF2RAP15509 400 aa12.76□□□□□ -0.37
COL1A1-201ENST00000225964 DLX2Q07687 328 aaPredicted RBP12.76□□□□□ -0.37
COL1A1-201ENST00000225964 TMEM35AQ53FP2 167 aa12.76□□□□□ -0.37
COL1A1-201ENST00000225964 TAS1R3Q7RTX0 852 aa12.76□□□□□ -0.37
COL1A1-201ENST00000225964 TMEM110Q86TL2 294 aa12.76□□□□□ -0.37
COL1A1-201ENST00000225964 ELP5Q8TE02 316 aa12.76□□□□□ -0.37
COL1A1-201ENST00000225964 CASTOR1Q8WTX7 329 aa12.76□□□□□ -0.37
COL1A1-201ENST00000225964 RAB2BQ8WUD1 216 aa12.76□□□□□ -0.37
COL1A1-201ENST00000225964 SIX2Q9NPC8 291 aa12.76□□□□□ -0.37
COL1A1-201ENST00000225964 OAZ3Q9UMX2 235 aa12.76□□□□□ -0.37
COL1A1-201ENST00000225964 IGLON5A6NGN9 336 aa12.76□□□□□ -0.37
COL1A1-201ENST00000225964 KHDC1Q4VXA5 237 aaKnown RBP12.76□□□□□ -0.37
COL1A1-201ENST00000225964 ALG10BQ5I7T1 473 aa12.76□□□□□ -0.37
COL1A1-201ENST00000225964 SYCE2Q6PIF2 218 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms