RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 ARL6IP5O75915 188 aa11.08□□□□□ -0.64
NOD1-201ENST00000222823 KAT7O95251 611 aa11.08□□□□□ -0.64
NOD1-201ENST00000222823 ACSL1P33121 698 aa11.08□□□□□ -0.64
NOD1-201ENST00000222823 RPS21P63220 83 aaKnown RBP11.08□□□□□ -0.64
NOD1-201ENST00000222823 CSTF1Q05048 431 aaKnown RBP11.08□□□□□ -0.64
NOD1-201ENST00000222823 ABRAXAS2Q15018 415 aa11.08□□□□□ -0.64
NOD1-201ENST00000222823 PRRT3Q5FWE3 981 aa11.08□□□□□ -0.64
NOD1-201ENST00000222823 ARHGAP40Q5TG30 622 aa11.08□□□□□ -0.64
NOD1-201ENST00000222823 CYP4V2Q6ZWL3 525 aaPredicted RBP11.08□□□□□ -0.64
NOD1-201ENST00000222823 LMX1AQ8TE12 382 aa11.08□□□□□ -0.64
NOD1-201ENST00000222823 ADAMTS6Q9UKP5 1117 aa11.08□□□□□ -0.64
NOD1-201ENST00000222823 MGAT4BQ9UQ53 548 aa11.08□□□□□ -0.64
NOD1-201ENST00000222823 FKBP7Q9Y680 259 aa11.08□□□□□ -0.64
NOD1-201ENST00000222823 NRXN2Q9P2S2 1712 aa11.08□□□□□ -0.64
NOD1-201ENST00000222823 A0A1W2PPW3 197 aa11.08□□□□□ -0.64
NOD1-201ENST00000222823 A0A1W2PRQ8 180 aa11.08□□□□□ -0.64
NOD1-201ENST00000222823 VEGFDO43915 354 aa11.08□□□□□ -0.64
NOD1-201ENST00000222823 TRIM3O75382 744 aaPredicted RBP11.08□□□□□ -0.64
NOD1-201ENST00000222823 IFI30P13284 250 aa11.08□□□□□ -0.64
NOD1-201ENST00000222823 JUPP14923 745 aa11.08□□□□□ -0.64
NOD1-201ENST00000222823 ARHGDIBP52566 201 aa11.08□□□□□ -0.64
NOD1-201ENST00000222823 RBBP4Q09028 425 aa11.08□□□□□ -0.64
NOD1-201ENST00000222823 TRAM2Q15035 370 aa11.08□□□□□ -0.64
NOD1-201ENST00000222823 DHCR24Q15392 516 aa11.08□□□□□ -0.64
NOD1-201ENST00000222823 ZNF773Q6PK81 442 aa11.08□□□□□ -0.64
NOD1-201ENST00000222823 BLOC1S3Q6QNY0 202 aa11.08□□□□□ -0.64
NOD1-201ENST00000222823 QSOX2Q6ZRP7 698 aa11.08□□□□□ -0.64
NOD1-201ENST00000222823 FAM43BQ6ZT52 329 aaPredicted RBP11.08□□□□□ -0.64
NOD1-201ENST00000222823 NANOGNBQ7Z5D8 188 aa11.08□□□□□ -0.64
NOD1-201ENST00000222823 SCD5Q86SK9 330 aa11.08□□□□□ -0.64
NOD1-201ENST00000222823 NRG4Q8WWG1 115 aa11.08□□□□□ -0.64
NOD1-201ENST00000222823 OR5P2Q8WZ92 322 aa11.08□□□□□ -0.64
NOD1-201ENST00000222823 TTYH1Q9H313 450 aaPredicted RBP11.08□□□□□ -0.64
NOD1-201ENST00000222823 SDHAF3Q9NRP4 125 aa11.08□□□□□ -0.64
NOD1-201ENST00000222823 MS4A12Q9NXJ0 267 aa11.08□□□□□ -0.64
NOD1-201ENST00000222823 A0A0X1KG70 313 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 SNAP29O95721 258 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 SPINT3P49223 89 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 CDKN1CP49918 316 aaPredicted RBP11.07□□□□□ -0.64
NOD1-201ENST00000222823 SH3BP2P78314 561 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 PITPNAQ00169 270 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 FADDQ13158 208 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 ZNF267Q14586 743 aaPredicted RBP11.07□□□□□ -0.64
NOD1-201ENST00000222823 OR4D1Q15615 310 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 FAM214AQ32MH5 1076 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 NCEH1Q6PIU2 408 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 MINDY1Q8N5J2 469 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 C12orf43Q96C57 262 aaKnown RBP11.07□□□□□ -0.64
NOD1-201ENST00000222823 SCRN2Q96FV2 425 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 ADAD1Q96M93 576 aaKnown RBP11.07□□□□□ -0.64
NOD1-201ENST00000222823 IL17FQ96PD4 163 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 OR8D2Q9GZM6 311 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 TRIM36Q9NQ86 728 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 C14orf105Q9NVL8 296 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 DNAJC27Q9NZQ0 273 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 HEPACAM2A8MVW5 462 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 TTC34A8MYJ7 566 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 RPP14O95059 124 aaKnown RBP11.07□□□□□ -0.64
NOD1-201ENST00000222823 IL3P08700 152 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 BPIP17213 487 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 UQCRC2P22695 453 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 TPRG1LQ5T0D9 272 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 XKR5Q6UX68 686 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 TMEM25Q86YD3 366 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 OR2L5Q8NG80 312 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 HIST1H2AAQ96QV6 131 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 CITED4Q96RK1 184 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 C20orf27Q9GZN8 174 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 TUBA8Q9NY65 449 aaPredicted RBP11.07□□□□□ -0.64
NOD1-201ENST00000222823 PTPRZ1P23471 2315 aaPredicted RBP11.07□□□□□ -0.64
NOD1-201ENST00000222823 A0A1W2PQU0 124 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 J3QRK9 145 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 GSTT2BP0CG30 244 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 TBPL1P62380 186 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 TUBA1BP68363 451 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 RPP38P78345 283 aaKnown RBP11.07□□□□□ -0.64
NOD1-201ENST00000222823 SGCBQ16585 318 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 TMEM164Q5U3C3 297 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 TUBA1AQ71U36 451 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 ARMCX6Q7L4S7 300 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 TMEM156Q8N614 296 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 OR8H1Q8NGG4 311 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 MAPK15Q8TD08 544 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 SMARCD2Q92925 531 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 FBXL8Q96CD0 374 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 MND1Q9BWT6 205 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 LIN28AQ9H9Z2 209 aaKnown RBP11.07□□□□□ -0.64
NOD1-201ENST00000222823 LYARQ9NX58 379 aaKnown RBP11.07□□□□□ -0.64
NOD1-201ENST00000222823 UPB1Q9UBR1 384 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 SERTAD3Q9UJW9 196 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 STOML2Q9UJZ1 356 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 PCDHB3Q9Y5E6 796 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 J3QLW9 94 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 PSMD9O00233 223 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 RAB36O95755 333 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 KLK3P07288 261 aaPredicted RBP11.07□□□□□ -0.64
NOD1-201ENST00000222823 PSKH1P11801 424 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 ZNF19P17023 458 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 ITGA3P26006 1051 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 DCDC1P59894 354 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms