RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 ALG10Q5BKT4 473 aa18.25■□□□□ 0.51
SMPD3-201ENST00000219334 FRMD7Q6ZUT3 714 aa18.25■□□□□ 0.51
SMPD3-201ENST00000219334 GPRIN1Q7Z2K8 1008 aa18.25■□□□□ 0.51
SMPD3-201ENST00000219334 ZNF565Q8N9K5 539 aa18.25■□□□□ 0.51
SMPD3-201ENST00000219334 RAB2BQ8WUD1 216 aa18.25■□□□□ 0.51
SMPD3-201ENST00000219334 OSTF1Q92882 214 aa18.25■□□□□ 0.51
SMPD3-201ENST00000219334 GNG8Q9UK08 70 aa18.25■□□□□ 0.51
SMPD3-201ENST00000219334 C10orf71Q711Q0 1435 aa18.25■□□□□ 0.51
SMPD3-201ENST00000219334 DFNA5O60443 496 aa18.25■□□□□ 0.51
SMPD3-201ENST00000219334 KCNJ13O60928 360 aa18.25■□□□□ 0.51
SMPD3-201ENST00000219334 HBQ1P09105 142 aa18.25■□□□□ 0.51
SMPD3-201ENST00000219334 SLC3A1Q07837 685 aa18.25■□□□□ 0.51
SMPD3-201ENST00000219334 SLAMF1Q13291 335 aa18.25■□□□□ 0.51
SMPD3-201ENST00000219334 MSS51Q4VC12 460 aa18.25■□□□□ 0.51
SMPD3-201ENST00000219334 OGFOD2Q6N063 350 aa18.25■□□□□ 0.51
SMPD3-201ENST00000219334 TTLL10Q6ZVT0 673 aa18.25■□□□□ 0.51
SMPD3-201ENST00000219334 ZNF283Q8N7M2 679 aa18.25■□□□□ 0.51
SMPD3-201ENST00000219334 ZNF615Q8N8J6 731 aa18.25■□□□□ 0.51
SMPD3-201ENST00000219334 GLIS1Q8NBF1 620 aa18.25■□□□□ 0.51
SMPD3-201ENST00000219334 OR1F2PQ96R84 312 aa18.25■□□□□ 0.51
SMPD3-201ENST00000219334 SMURF1Q9HCE7 757 aa18.25■□□□□ 0.51
SMPD3-201ENST00000219334 OAZ3Q9UMX2 235 aa18.25■□□□□ 0.51
SMPD3-201ENST00000219334 PRAMEF33A0A0G2JMD5 474 aa18.24■□□□□ 0.51
SMPD3-201ENST00000219334 C1orf226A1L170 272 aa18.24■□□□□ 0.51
SMPD3-201ENST00000219334 TLX2O43763 284 aaPredicted RBP18.24■□□□□ 0.51
SMPD3-201ENST00000219334 PRAMEF10O60809 474 aa18.24■□□□□ 0.51
SMPD3-201ENST00000219334 DRD1P21728 446 aa18.24■□□□□ 0.51
SMPD3-201ENST00000219334 HHEXQ03014 270 aa18.24■□□□□ 0.51
SMPD3-201ENST00000219334 GRM7Q14831 915 aa18.24■□□□□ 0.51
SMPD3-201ENST00000219334 CYBRD1Q53TN4 286 aa18.24■□□□□ 0.51
SMPD3-201ENST00000219334 PYHIN1Q6K0P9 492 aa18.24■□□□□ 0.51
SMPD3-201ENST00000219334 GALNT12Q8IXK2 581 aa18.24■□□□□ 0.51
SMPD3-201ENST00000219334 C7orf43Q8WVR3 580 aa18.24■□□□□ 0.51
SMPD3-201ENST00000219334 HPS1Q92902 700 aa18.24■□□□□ 0.51
SMPD3-201ENST00000219334 LMAN1LQ9HAT1 526 aa18.24■□□□□ 0.51
SMPD3-201ENST00000219334 OARD1Q9Y530 152 aa18.24■□□□□ 0.51
SMPD3-201ENST00000219334 SOX30O94993 753 aa18.24■□□□□ 0.51
SMPD3-201ENST00000219334 IFNA21P01568 189 aa18.24■□□□□ 0.51
SMPD3-201ENST00000219334 CBLP22681 906 aa18.24■□□□□ 0.51
SMPD3-201ENST00000219334 MAD2L1BPQ15013 274 aaPredicted RBP18.24■□□□□ 0.51
SMPD3-201ENST00000219334 THRSPQ92748 146 aa18.24■□□□□ 0.51
SMPD3-201ENST00000219334 BORCS8Q96FH0 119 aa18.24■□□□□ 0.51
SMPD3-201ENST00000219334 ZNF221Q9UK13 617 aa18.24■□□□□ 0.51
SMPD3-201ENST00000219334 H3BQ06 376 aaPredicted RBP18.24■□□□□ 0.51
SMPD3-201ENST00000219334 ENTPD6O75354 484 aa18.24■□□□□ 0.51
SMPD3-201ENST00000219334 NPPAP01160 153 aa18.24■□□□□ 0.51
SMPD3-201ENST00000219334 CD36P16671 472 aa18.24■□□□□ 0.51
SMPD3-201ENST00000219334 CD9P21926 228 aa18.24■□□□□ 0.51
SMPD3-201ENST00000219334 AGTR2P50052 363 aa18.24■□□□□ 0.51
SMPD3-201ENST00000219334 SLC18A1P54219 525 aa18.24■□□□□ 0.51
SMPD3-201ENST00000219334 TREML1Q86YW5 311 aa18.24■□□□□ 0.51
SMPD3-201ENST00000219334 NINJ1Q92982 152 aa18.24■□□□□ 0.51
SMPD3-201ENST00000219334 MRGPRX2Q96LB1 330 aa18.24■□□□□ 0.51
SMPD3-201ENST00000219334 MNTQ99583 582 aa18.24■□□□□ 0.51
SMPD3-201ENST00000219334 HOXD13P35453 343 aa18.24■□□□□ 0.51
SMPD3-201ENST00000219334 DNAJB13P59910 316 aa18.24■□□□□ 0.51
SMPD3-201ENST00000219334 RPL19P84098 196 aaKnown RBP18.24■□□□□ 0.51
SMPD3-201ENST00000219334 FIBINQ8TAL6 211 aa18.24■□□□□ 0.51
SMPD3-201ENST00000219334 DDX1Q92499 740 aaKnown RBP18.24■□□□□ 0.51
SMPD3-201ENST00000219334 TTYH2Q9BSA4 534 aa18.24■□□□□ 0.51
SMPD3-201ENST00000219334 TTYH1Q9H313 450 aaPredicted RBP18.24■□□□□ 0.51
SMPD3-201ENST00000219334 PIK3C2AO00443 1686 aa18.24■□□□□ 0.51
SMPD3-201ENST00000219334 GLP1RP43220 463 aa18.23■□□□□ 0.51
SMPD3-201ENST00000219334 NTHL1P78549 312 aa18.23■□□□□ 0.51
SMPD3-201ENST00000219334 ROR2Q01974 943 aaKnown RBP18.23■□□□□ 0.51
SMPD3-201ENST00000219334 ZNF234Q14588 700 aa18.23■□□□□ 0.51
SMPD3-201ENST00000219334 PIGWQ7Z7B1 504 aa18.23■□□□□ 0.51
SMPD3-201ENST00000219334 TMEM25Q86YD3 366 aa18.23■□□□□ 0.51
SMPD3-201ENST00000219334 ZNF100Q8IYN0 542 aa18.23■□□□□ 0.51
SMPD3-201ENST00000219334 ALDH16A1Q8IZ83 802 aa18.23■□□□□ 0.51
SMPD3-201ENST00000219334 MND1Q9BWT6 205 aa18.23■□□□□ 0.51
SMPD3-201ENST00000219334 EBF2Q9HAK2 575 aa18.23■□□□□ 0.51
SMPD3-201ENST00000219334 HSD3B1P14060 373 aa18.23■□□□□ 0.51
SMPD3-201ENST00000219334 HSD3B2P26439 372 aa18.23■□□□□ 0.51
SMPD3-201ENST00000219334 MAPK3P27361 379 aaPredicted RBP18.23■□□□□ 0.51
SMPD3-201ENST00000219334 ARPC4P59998 168 aa18.23■□□□□ 0.51
SMPD3-201ENST00000219334 KCNC4Q03721 635 aa18.23■□□□□ 0.51
SMPD3-201ENST00000219334 LIN52Q52LA3 116 aa18.23■□□□□ 0.51
SMPD3-201ENST00000219334 EGFLAMQ63HQ2 1017 aa18.23■□□□□ 0.51
SMPD3-201ENST00000219334 ZNF572Q7Z3I7 529 aaPredicted RBP18.23■□□□□ 0.51
SMPD3-201ENST00000219334 PLCZ1Q86YW0 608 aa18.23■□□□□ 0.51
SMPD3-201ENST00000219334 ADAMTS18Q8TE60 1221 aa18.23■□□□□ 0.51
SMPD3-201ENST00000219334 ZDHHC1Q8WTX9 485 aa18.23■□□□□ 0.51
SMPD3-201ENST00000219334 TIMMDC1Q9NPL8 285 aa18.23■□□□□ 0.51
SMPD3-201ENST00000219334 PDE4DIPQ5VU43 2346 aa18.23■□□□□ 0.51
SMPD3-201ENST00000219334 CLDN25C9JDP6 229 aa18.23■□□□□ 0.51
SMPD3-201ENST00000219334 KLF11O14901 512 aa18.23■□□□□ 0.51
SMPD3-201ENST00000219334 EMC8O43402 210 aa18.23■□□□□ 0.51
SMPD3-201ENST00000219334 CKMT2P17540 419 aa18.23■□□□□ 0.51
SMPD3-201ENST00000219334 LEPRP48357 1165 aaKnown RBP18.23■□□□□ 0.51
SMPD3-201ENST00000219334 TBPL1P62380 186 aa18.23■□□□□ 0.51
SMPD3-201ENST00000219334 DSC1Q08554 894 aa18.23■□□□□ 0.51
SMPD3-201ENST00000219334 RAET1LQ5VY80 246 aa18.23■□□□□ 0.51
SMPD3-201ENST00000219334 EPGNQ6UW88 154 aa18.23■□□□□ 0.51
SMPD3-201ENST00000219334 APCDD1Q8J025 514 aa18.23■□□□□ 0.51
SMPD3-201ENST00000219334 NUP43Q8NFH3 380 aa18.23■□□□□ 0.51
SMPD3-201ENST00000219334 ACTR3BQ9P1U1 418 aa18.23■□□□□ 0.51
SMPD3-201ENST00000219334 PLEKHA6Q9Y2H5 1048 aa18.23■□□□□ 0.51
SMPD3-201ENST00000219334 ACOT7O00154 380 aa18.23■□□□□ 0.51
SMPD3-201ENST00000219334 GPR37L1O60883 481 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms