RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 DSELQ8IZU8 1212 aa25.8■■□□□ 1.72
CHMP4B-201ENST00000217402 C11orf24Q96F05 449 aaPredicted RBP25.8■■□□□ 1.72
CHMP4B-201ENST00000217402 TMEM120AQ9BXJ8 343 aa25.8■■□□□ 1.72
CHMP4B-201ENST00000217402 B3GNT4Q9C0J1 378 aa25.8■■□□□ 1.72
CHMP4B-201ENST00000217402 KCNK13Q9HB14 408 aa25.8■■□□□ 1.72
CHMP4B-201ENST00000217402 PCDHGA7Q9Y5G6 932 aa25.8■■□□□ 1.72
CHMP4B-201ENST00000217402 GNG14A0A1W2PPG7 69 aa25.79■■□□□ 1.72
CHMP4B-201ENST00000217402 CDRT15L2A8MXV6 281 aa25.79■■□□□ 1.72
CHMP4B-201ENST00000217402 H0YIG0 161 aa25.79■■□□□ 1.72
CHMP4B-201ENST00000217402 TMPRSS11DO60235 418 aa25.79■■□□□ 1.72
CHMP4B-201ENST00000217402 MYO1DO94832 1006 aa25.79■■□□□ 1.72
CHMP4B-201ENST00000217402 SCELO95171 688 aa25.79■■□□□ 1.72
CHMP4B-201ENST00000217402 DLGAP3O95886 979 aa25.79■■□□□ 1.72
CHMP4B-201ENST00000217402 DCDP81605 110 aaKnown RBP25.79■■□□□ 1.72
CHMP4B-201ENST00000217402 SLAMF1Q13291 335 aa25.79■■□□□ 1.72
CHMP4B-201ENST00000217402 NKAIN1Q4KMZ8 207 aa25.79■■□□□ 1.72
CHMP4B-201ENST00000217402 ZNF385CQ66K41 422 aaPredicted RBP25.79■■□□□ 1.72
CHMP4B-201ENST00000217402 NOXRED1Q6NXP6 359 aa25.79■■□□□ 1.72
CHMP4B-201ENST00000217402 IGF2-ASQ6U949 168 aa25.79■■□□□ 1.72
CHMP4B-201ENST00000217402 ZCCHC7Q8N3Z6 543 aaKnown RBP25.79■■□□□ 1.72
CHMP4B-201ENST00000217402 YIPF2Q9BWQ6 316 aa25.79■■□□□ 1.72
CHMP4B-201ENST00000217402 EPN3Q9H201 632 aa25.79■■□□□ 1.72
CHMP4B-201ENST00000217402 AKIRIN1Q9H9L7 192 aaPredicted RBP25.79■■□□□ 1.72
CHMP4B-201ENST00000217402 TCF7L2Q9NQB0 619 aa25.79■■□□□ 1.72
CHMP4B-201ENST00000217402 ADAM29Q9UKF5 820 aa25.79■■□□□ 1.72
CHMP4B-201ENST00000217402 DLGAP4Q9Y2H0 992 aa25.79■■□□□ 1.72
CHMP4B-201ENST00000217402 NEUROG3Q9Y4Z2 214 aa25.79■■□□□ 1.72
CHMP4B-201ENST00000217402 KLK3P07288 261 aaPredicted RBP25.78■■□□□ 1.72
CHMP4B-201ENST00000217402 LBPP18428 481 aa25.78■■□□□ 1.72
CHMP4B-201ENST00000217402 RUNX2Q13950 521 aa25.78■■□□□ 1.72
CHMP4B-201ENST00000217402 DSG2Q14126 1118 aa25.78■■□□□ 1.72
CHMP4B-201ENST00000217402 LSM12Q3MHD2 195 aaKnown RBP25.78■■□□□ 1.72
CHMP4B-201ENST00000217402 LCN10Q6JVE6 187 aa25.78■■□□□ 1.72
CHMP4B-201ENST00000217402 C6orf15Q6UXA7 325 aaPredicted RBP25.78■■□□□ 1.72
CHMP4B-201ENST00000217402 RIPOR1Q6ZS17 1223 aa25.78■■□□□ 1.72
CHMP4B-201ENST00000217402 TIPARPQ7Z3E1 657 aaKnown RBP25.78■■□□□ 1.72
CHMP4B-201ENST00000217402 ACTRT2Q8TDY3 377 aa25.78■■□□□ 1.72
CHMP4B-201ENST00000217402 MR1Q95460 341 aa25.78■■□□□ 1.72
CHMP4B-201ENST00000217402 METTL2AQ96IZ6 378 aaKnown RBP25.78■■□□□ 1.72
CHMP4B-201ENST00000217402 LRFN5Q96NI6 719 aa25.78■■□□□ 1.72
CHMP4B-201ENST00000217402 ELAC2Q9BQ52 826 aaKnown RBP25.78■■□□□ 1.72
CHMP4B-201ENST00000217402 KLHL14Q9P2G3 628 aa25.78■■□□□ 1.72
CHMP4B-201ENST00000217402 MCM8Q9UJA3 840 aa25.78■■□□□ 1.72
CHMP4B-201ENST00000217402 FBXW2Q9UKT8 454 aa25.78■■□□□ 1.72
CHMP4B-201ENST00000217402 TMED5Q9Y3A6 229 aa25.78■■□□□ 1.72
CHMP4B-201ENST00000217402 DXOO77932 396 aaKnown RBP25.77■■□□□ 1.72
CHMP4B-201ENST00000217402 ADRB1P08588 477 aa25.77■■□□□ 1.72
CHMP4B-201ENST00000217402 ANXA4P09525 319 aaPredicted RBP25.77■■□□□ 1.72
CHMP4B-201ENST00000217402 MAPK12P53778 367 aa25.77■■□□□ 1.72
CHMP4B-201ENST00000217402 ERVK-8P63133 956 aa25.77■■□□□ 1.72
CHMP4B-201ENST00000217402 GALNT18Q6P9A2 607 aa25.77■■□□□ 1.72
CHMP4B-201ENST00000217402 FAM199XQ6PEV8 388 aaPredicted RBP25.77■■□□□ 1.72
CHMP4B-201ENST00000217402 CA13Q8N1Q1 262 aa25.77■■□□□ 1.72
CHMP4B-201ENST00000217402 CDC26Q8NHZ8 85 aa25.77■■□□□ 1.72
CHMP4B-201ENST00000217402 MAPKAP1Q9BPZ7 522 aa25.77■■□□□ 1.72
CHMP4B-201ENST00000217402 SPRY4Q9C004 299 aa25.77■■□□□ 1.72
CHMP4B-201ENST00000217402 THSD1Q9NS62 852 aa25.77■■□□□ 1.72
CHMP4B-201ENST00000217402 SLC22A11Q9NSA0 550 aa25.77■■□□□ 1.72
CHMP4B-201ENST00000217402 SIRT5Q9NXA8 310 aa25.77■■□□□ 1.72
CHMP4B-201ENST00000217402 CHST10O43529 356 aa25.77■■□□□ 1.72
CHMP4B-201ENST00000217402 FAM58BPP0C7Q3 252 aa25.77■■□□□ 1.72
CHMP4B-201ENST00000217402 AGXTP21549 392 aa25.77■■□□□ 1.72
CHMP4B-201ENST00000217402 EFCAB3Q8N7B9 438 aa25.77■■□□□ 1.72
CHMP4B-201ENST00000217402 CEP70Q8NHQ1 597 aa25.77■■□□□ 1.72
CHMP4B-201ENST00000217402 RILPQ96NA2 401 aa25.77■■□□□ 1.72
CHMP4B-201ENST00000217402 RBCK1Q9BYM8 510 aa25.77■■□□□ 1.72
CHMP4B-201ENST00000217402 TRPC4Q9UBN4 977 aa25.77■■□□□ 1.72
CHMP4B-201ENST00000217402 MSRB2Q9Y3D2 182 aa25.77■■□□□ 1.72
CHMP4B-201ENST00000217402 FER1L5A0AVI2 2057 aa25.76■■□□□ 1.71
CHMP4B-201ENST00000217402 E9PBE3 544 aa25.76■■□□□ 1.71
CHMP4B-201ENST00000217402 KLHL41O60662 606 aa25.76■■□□□ 1.71
CHMP4B-201ENST00000217402 ARFIP2P53365 341 aa25.76■■□□□ 1.71
CHMP4B-201ENST00000217402 LIM2P55344 173 aa25.76■■□□□ 1.71
CHMP4B-201ENST00000217402 HNRNPH2P55795 449 aaKnown RBP25.76■■□□□ 1.71
CHMP4B-201ENST00000217402 EMX2Q04743 252 aa25.76■■□□□ 1.71
CHMP4B-201ENST00000217402 IL23RQ5VWK5 629 aa25.76■■□□□ 1.71
CHMP4B-201ENST00000217402 TMEM198Q66K66 360 aa25.76■■□□□ 1.71
CHMP4B-201ENST00000217402 COX15Q7KZN9 410 aa25.76■■□□□ 1.71
CHMP4B-201ENST00000217402 SPATA21Q7Z572 469 aa25.76■■□□□ 1.71
CHMP4B-201ENST00000217402 MARK4Q96L34 752 aa25.76■■□□□ 1.71
CHMP4B-201ENST00000217402 FCRL1Q96LA6 429 aa25.76■■□□□ 1.71
CHMP4B-201ENST00000217402 NPLQ9BXD5 320 aaPredicted RBP25.76■■□□□ 1.71
CHMP4B-201ENST00000217402 CHST8Q9H2A9 424 aa25.76■■□□□ 1.71
CHMP4B-201ENST00000217402 IFT80Q9P2H3 777 aaPredicted RBP25.76■■□□□ 1.71
CHMP4B-201ENST00000217402 DAPP1Q9UN19 280 aa25.76■■□□□ 1.71
CHMP4B-201ENST00000217402 G3BP2Q9UN86 482 aaKnown RBP25.76■■□□□ 1.71
CHMP4B-201ENST00000217402 MAP4K5Q9Y4K4 846 aa25.76■■□□□ 1.71
CHMP4B-201ENST00000217402 SDK2Q58EX2 2172 aa25.76■■□□□ 1.71
CHMP4B-201ENST00000217402 STMND1H3BQB6 276 aa25.75■■□□□ 1.71
CHMP4B-201ENST00000217402 TACR1P25103 407 aa25.75■■□□□ 1.71
CHMP4B-201ENST00000217402 MAPK1P28482 360 aa25.75■■□□□ 1.71
CHMP4B-201ENST00000217402 SHC2P98077 582 aa25.75■■□□□ 1.71
CHMP4B-201ENST00000217402 MAD2L1Q13257 205 aaPredicted RBP25.75■■□□□ 1.71
CHMP4B-201ENST00000217402 OR51Q1Q8NH59 317 aa25.75■■□□□ 1.71
CHMP4B-201ENST00000217402 PEX11GQ96HA9 241 aa25.75■■□□□ 1.71
CHMP4B-201ENST00000217402 DPH2Q9BQC3 489 aaPredicted RBP25.75■■□□□ 1.71
CHMP4B-201ENST00000217402 LYARQ9NX58 379 aaKnown RBP25.75■■□□□ 1.71
CHMP4B-201ENST00000217402 NOP53Q9NZM5 478 aaKnown RBP25.75■■□□□ 1.71
CHMP4B-201ENST00000217402 CTSFQ9UBX1 484 aa25.75■■□□□ 1.71
CHMP4B-201ENST00000217402 EIF3LQ9Y262 564 aaKnown RBP25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms