RNA–Protein interactions for RNA: ENST00000216155.11

SYNGR1-201, Transcript of synaptogyrin 1, humanhuman

TSL 3 BASIC

Gene SYNGR1, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-201ENST00000216155 SLBPQ14493 270 aaKnown RBP eCLIP18.32■□□□□ 0.52
SYNGR1-201ENST00000216155 C18orf21Q32NC0 220 aaPredicted RBP18.32■□□□□ 0.52
SYNGR1-201ENST00000216155 C16orf47Q6ZP98 133 aaPredicted RBP18.32■□□□□ 0.52
SYNGR1-201ENST00000216155 SLCO4C1Q6ZQN7 724 aa18.32■□□□□ 0.52
SYNGR1-201ENST00000216155 CEP128Q6ZU80 1094 aa18.32■□□□□ 0.52
SYNGR1-201ENST00000216155 ZC3HC1Q86WB0 502 aaKnown RBP18.32■□□□□ 0.52
SYNGR1-201ENST00000216155 KLHDC8AQ8IYD2 350 aa18.32■□□□□ 0.52
SYNGR1-201ENST00000216155 PDIK1LQ8N165 341 aa18.32■□□□□ 0.52
SYNGR1-201ENST00000216155 RPRMLQ8N4K4 120 aa18.32■□□□□ 0.52
SYNGR1-201ENST00000216155 FAM47BQ8NA70 645 aa18.32■□□□□ 0.52
SYNGR1-201ENST00000216155 ANKRD7Q92527 254 aa18.32■□□□□ 0.52
SYNGR1-201ENST00000216155 MS4A6EQ96DS6 147 aa18.32■□□□□ 0.52
SYNGR1-201ENST00000216155 NPLQ9BXD5 320 aaPredicted RBP18.32■□□□□ 0.52
SYNGR1-201ENST00000216155 NPDC1Q9NQX5 325 aaPredicted RBP18.32■□□□□ 0.52
SYNGR1-201ENST00000216155 DEPPQ9NTK1 212 aa18.32■□□□□ 0.52
SYNGR1-201ENST00000216155 KCMF1Q9P0J7 381 aa18.32■□□□□ 0.52
SYNGR1-201ENST00000216155 SNX12Q9UMY4 172 aa18.32■□□□□ 0.52
SYNGR1-201ENST00000216155 HCFC1P51610 2035 aa18.32■□□□□ 0.52
SYNGR1-201ENST00000216155 FAM95CA0A1B0GW59 222 aa18.31■□□□□ 0.52
SYNGR1-201ENST00000216155 LRIT2A6NDA9 550 aa18.31■□□□□ 0.52
SYNGR1-201ENST00000216155 TMEM200CA6NKL6 621 aa18.31■□□□□ 0.52
SYNGR1-201ENST00000216155 CES2O00748 559 aa18.31■□□□□ 0.52
SYNGR1-201ENST00000216155 TBX6O95947 436 aaPredicted RBP18.31■□□□□ 0.52
SYNGR1-201ENST00000216155 TUBB4AP04350 444 aa18.31■□□□□ 0.52
SYNGR1-201ENST00000216155 C1GALT1C1LP0DN25 315 aa18.31■□□□□ 0.52
SYNGR1-201ENST00000216155 SLC6A12P48065 614 aa18.31■□□□□ 0.52
SYNGR1-201ENST00000216155 HNMTP50135 292 aa18.31■□□□□ 0.52
SYNGR1-201ENST00000216155 SSR4P51571 173 aa18.31■□□□□ 0.52
SYNGR1-201ENST00000216155 HSD17B7P56937 341 aa18.31■□□□□ 0.52
SYNGR1-201ENST00000216155 RAB38P57729 211 aa18.31■□□□□ 0.52
SYNGR1-201ENST00000216155 TFF3Q07654 80 aa18.31■□□□□ 0.52
SYNGR1-201ENST00000216155 SLC13A2Q13183 592 aa18.31■□□□□ 0.52
SYNGR1-201ENST00000216155 MORF4L2Q15014 288 aa18.31■□□□□ 0.52
SYNGR1-201ENST00000216155 TSNQ15631 228 aaKnown RBP18.31■□□□□ 0.52
SYNGR1-201ENST00000216155 ARHGAP11AQ6P4F7 1023 aa18.31■□□□□ 0.52
SYNGR1-201ENST00000216155 TMIGD1Q6UXZ0 262 aa18.31■□□□□ 0.52
SYNGR1-201ENST00000216155 NKAPQ8N5F7 415 aaKnown RBP18.31■□□□□ 0.52
SYNGR1-201ENST00000216155 PSD4Q8NDX1 1056 aa18.31■□□□□ 0.52
SYNGR1-201ENST00000216155 TTLQ8NG68 377 aa18.31■□□□□ 0.52
SYNGR1-201ENST00000216155 ANKRD49Q8WVL7 239 aa18.31■□□□□ 0.52
SYNGR1-201ENST00000216155 FAR2Q96K12 515 aa18.31■□□□□ 0.52
SYNGR1-201ENST00000216155 CSF3RQ99062 836 aa18.31■□□□□ 0.52
SYNGR1-201ENST00000216155 TP63Q9H3D4 680 aaPredicted RBP18.31■□□□□ 0.52
SYNGR1-201ENST00000216155 ADAP2Q9NPF8 381 aa18.31■□□□□ 0.52
SYNGR1-201ENST00000216155 TIMMDC1Q9NPL8 285 aa18.31■□□□□ 0.52
SYNGR1-201ENST00000216155 MED13LQ71F56 2210 aa18.31■□□□□ 0.52
SYNGR1-201ENST00000216155 ZNF407Q9C0G0 2248 aa18.31■□□□□ 0.52
SYNGR1-201ENST00000216155 PINLYPA6NC86 204 aa18.3■□□□□ 0.52
SYNGR1-201ENST00000216155 FAM90A27PA6NNH2 459 aa18.3■□□□□ 0.52
SYNGR1-201ENST00000216155 FANCGO15287 622 aa18.3■□□□□ 0.52
SYNGR1-201ENST00000216155 PDE9AO76083 593 aa18.3■□□□□ 0.52
SYNGR1-201ENST00000216155 GNAZP19086 355 aa18.3■□□□□ 0.52
SYNGR1-201ENST00000216155 TAS2R39P59534 338 aa18.3■□□□□ 0.52
SYNGR1-201ENST00000216155 FRG1Q14331 258 aaKnown RBP18.3■□□□□ 0.52
SYNGR1-201ENST00000216155 FRA10AC1Q70Z53 315 aa18.3■□□□□ 0.52
SYNGR1-201ENST00000216155 VN1R5Q7Z5H4 357 aa18.3■□□□□ 0.52
SYNGR1-201ENST00000216155 CLNKQ7Z7G1 428 aa18.3■□□□□ 0.52
SYNGR1-201ENST00000216155 ADAMTSL2Q86TH1 951 aa18.3■□□□□ 0.52
SYNGR1-201ENST00000216155 CCT6BQ92526 530 aa18.3■□□□□ 0.52
SYNGR1-201ENST00000216155 RHBDF1Q96CC6 855 aa18.3■□□□□ 0.52
SYNGR1-201ENST00000216155 LRRC39Q96DD0 335 aa18.3■□□□□ 0.52
SYNGR1-201ENST00000216155 QRFPRQ96P65 431 aa18.3■□□□□ 0.52
SYNGR1-201ENST00000216155 CCDC77Q9BR77 488 aa18.3■□□□□ 0.52
SYNGR1-201ENST00000216155 LIN28AQ9H9Z2 209 aaKnown RBP18.3■□□□□ 0.52
SYNGR1-201ENST00000216155 RNF6Q9Y252 685 aa18.3■□□□□ 0.52
SYNGR1-201ENST00000216155 YARS2Q9Y2Z4 477 aaKnown RBP18.3■□□□□ 0.52
SYNGR1-201ENST00000216155 INTS1Q8N201 2190 aaKnown RBP18.3■□□□□ 0.52
SYNGR1-201ENST00000216155 PHF3Q92576 2039 aaKnown RBP18.29■□□□□ 0.52
SYNGR1-201ENST00000216155 A0A0G2JMM0 328 aa18.29■□□□□ 0.52
SYNGR1-201ENST00000216155 A0A1W2PPB8 328 aa18.29■□□□□ 0.52
SYNGR1-201ENST00000216155 A0A1W2PRS3 328 aa18.29■□□□□ 0.52
SYNGR1-201ENST00000216155 NKX2-6A6NCS4 301 aa18.29■□□□□ 0.52
SYNGR1-201ENST00000216155 A8MVJ9 347 aa18.29■□□□□ 0.52
SYNGR1-201ENST00000216155 KIR3DP1A8MWS1 328 aa18.29■□□□□ 0.52
SYNGR1-201ENST00000216155 CLDN4O14493 209 aa18.29■□□□□ 0.52
SYNGR1-201ENST00000216155 B3GALT2O43825 422 aa18.29■□□□□ 0.52
SYNGR1-201ENST00000216155 OR2J2O76002 312 aa18.29■□□□□ 0.52
SYNGR1-201ENST00000216155 ZFAND5O76080 213 aa18.29■□□□□ 0.52
SYNGR1-201ENST00000216155 OR6B1O95007 311 aa18.29■□□□□ 0.52
SYNGR1-201ENST00000216155 CERS1P27544 350 aa18.29■□□□□ 0.52
SYNGR1-201ENST00000216155 GSTM2P28161 218 aa18.29■□□□□ 0.52
SYNGR1-201ENST00000216155 CHRNB4P30926 498 aa18.29■□□□□ 0.52
SYNGR1-201ENST00000216155 PLA2G16P53816 162 aa18.29■□□□□ 0.52
SYNGR1-201ENST00000216155 MGAT5Q09328 741 aa18.29■□□□□ 0.52
SYNGR1-201ENST00000216155 ADPRMQ3LIE5 342 aa18.29■□□□□ 0.52
SYNGR1-201ENST00000216155 XKR6Q5GH73 641 aa18.29■□□□□ 0.52
SYNGR1-201ENST00000216155 EMC4Q5J8M3 183 aa18.29■□□□□ 0.52
SYNGR1-201ENST00000216155 TMEM211Q6ICI0 200 aa18.29■□□□□ 0.52
SYNGR1-201ENST00000216155 ADNP2Q6IQ32 1131 aa18.29■□□□□ 0.52
SYNGR1-201ENST00000216155 SPNS3Q6ZMD2 512 aa18.29■□□□□ 0.52
SYNGR1-201ENST00000216155 ANKMY2Q8IV38 441 aa18.29■□□□□ 0.52
SYNGR1-201ENST00000216155 GPALPP1Q8IXQ4 340 aa18.29■□□□□ 0.52
SYNGR1-201ENST00000216155 ZNF595Q8IYB9 648 aa18.29■□□□□ 0.52
SYNGR1-201ENST00000216155 OR2M7Q8NG81 312 aa18.29■□□□□ 0.52
SYNGR1-201ENST00000216155 ASB5Q8WWX0 329 aa18.29■□□□□ 0.52
SYNGR1-201ENST00000216155 UCK2Q9BZX2 261 aa18.29■□□□□ 0.52
SYNGR1-201ENST00000216155 HPF1Q9NWY4 346 aa18.29■□□□□ 0.52
SYNGR1-201ENST00000216155 CTNNAL1Q9UBT7 734 aa18.29■□□□□ 0.52
SYNGR1-201ENST00000216155 ERVK-11Q9UQG0 969 aa18.29■□□□□ 0.52
SYNGR1-201ENST00000216155 A0A088AWK7 358 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms