RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 PRORSD1PA6NEY8 169 aa13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 ENTPD6O75354 484 aa13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 GJB3O75712 270 aa13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 CHRNA1P02708 482 aa13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 PPIGQ13427 754 aaKnown RBP eCLIP13.12□□□□□ -0.311e-10■□□□□ 8.9
TGFBR3-201ENST00000212355 CLECL1Q8IZS7 167 aa13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 TEX19Q8NA77 164 aa13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 NLE1Q9NVX2 485 aaPredicted RBP13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 BCAS2O75934 225 aaPredicted RBP13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 RFTN1Q14699 578 aaPredicted RBP13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 C1orf189Q5VU69 101 aa13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 KIAA1614Q5VZ46 1190 aa13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 ZNF527Q8NB42 609 aa13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 SHKBP1Q8TBC3 707 aa13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 MMABQ96EY8 250 aaPredicted RBP13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 TMEM41AQ96HV5 264 aa13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 FAM210AQ96ND0 272 aa13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 PCYT2Q99447 389 aa13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 CD180Q99467 661 aa13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 HAPLN2Q9GZV7 340 aa13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 NUDT15Q9NV35 164 aa13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 CYP8B1Q9UNU6 501 aa13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 MEIS3P2A8K0S8 358 aa13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 CSTBP04080 98 aaKnown RBP13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 FESP07332 822 aa13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 MAGEA11P43364 429 aa13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 GALNT2Q10471 571 aa13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 ZC3H14Q6PJT7 736 aaKnown RBP13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 BOLLQ8N9W6 283 aaKnown RBP13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 OR52B6Q8NGF0 335 aa13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 ZC3H10Q96K80 434 aaKnown RBP13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 BOCQ9BWV1 1114 aa13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 MYH11P35749 1972 aa13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 PIK3C2AO00443 1686 aa13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 SFTPBP07988 381 aa13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 STSP08842 583 aa13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 CELP19835 753 aa13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 SLC6A4P31645 630 aa13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 SERINC3Q13530 473 aa13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 CARM1Q86X55 608 aa13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 GJD3Q8N144 294 aa13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 FCGR1BQ92637 280 aa13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 ABCG2Q9UNQ0 655 aa13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 OR1A2Q9Y585 309 aa13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 ALG5Q9Y673 324 aa13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 A0A1W2PP55 124 aa13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 ZNF670-ZNF695F2Z2N8 137 aa13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 PAX3P23760 479 aa13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 SLC36A3Q495N2 470 aa13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 SETD7Q8WTS6 366 aaKnown RBP13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 SRA1Q9HD15 236 aaKnown RBP13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 TDP1Q9NUW8 608 aa13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 SH2B3Q9UQQ2 575 aa13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 GMEB1Q9Y692 573 aa13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 TYROBPO43914 113 aa13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 FGF18O76093 207 aa13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 HOXB2P14652 356 aa13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 STOMP27105 288 aa13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 KCNAB2Q13303 367 aa13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 GINS1Q14691 196 aa13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 MTFR2Q6P444 385 aa13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 F2RL3Q96RI0 385 aa13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 TP63Q9H3D4 680 aaPredicted RBP13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 RASGEF1BQ0VAM2 473 aa13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 MAD2L1BPQ15013 274 aaPredicted RBP13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 TTC9BQ8N6N2 239 aa13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 C7orf34Q96L11 122 aa13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 MACROD1Q9BQ69 325 aa13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 ATG5Q9H1Y0 275 aa13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 BRF2Q9HAW0 419 aa13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 EXTL2Q9UBQ6 330 aa13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 RBM47A0AV96 593 aaKnown RBP13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 TLX3O43711 291 aaPredicted RBP13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 HTR1AP08908 422 aa13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 FECHP22830 423 aa13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 SPRED3Q2MJR0 410 aa13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 FLYWCH1Q4VC44 716 aa13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 UBE2UQ5VVX9 321 aa13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 TSPAN33Q86UF1 283 aa13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 APCDD1Q8J025 514 aa13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 CIDECQ96AQ7 238 aaPredicted RBP13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 NXPE2Q96DL1 559 aa13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 TRIM36Q9NQ86 728 aa13.11□□□□□ -0.31
TGFBR3-201ENST00000212355 MAS1P04201 325 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 TACSTD2P09758 323 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 CD1DP15813 335 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 ZNF81P51508 661 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 PNLIPRP1P54315 467 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 OR4D2P58180 307 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 LMAN2Q12907 356 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 ZNF227Q86WZ6 799 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 OR4K17Q8NGC6 315 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 KCTD13Q8WZ19 329 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 HDHD5Q9BXW7 423 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 GPR83Q9NYM4 423 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 MYH13Q9UKX3 1938 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 SLIT2O94813 1529 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 OR6C74A6NCV1 312 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 NFKBIEO00221 500 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms