RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 SERPIND1P05546 499 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 ARAFP10398 606 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 HOXB2P14652 356 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 JUNBP17275 347 aaPredicted RBP7.88□□□□□ -1.15
VAMP3-201ENST00000054666 GSTM2P28161 218 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 PKLRP30613 574 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 IGFALSP35858 605 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 SSR2P43308 183 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 MAGEA10P43363 369 aaPredicted RBP7.88□□□□□ -1.15
VAMP3-201ENST00000054666 KIR2DL1P43626 348 aaPredicted RBP7.88□□□□□ -1.15
VAMP3-201ENST00000054666 DAPP51397 102 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 GALK1P51570 392 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 MVDP53602 400 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 ADPRHP54922 357 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 MANFP55145 182 aaKnown RBP7.88□□□□□ -1.15
VAMP3-201ENST00000054666 CASP9P55211 416 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 ISL1P61371 349 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 SPIBQ01892 262 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 RAPSNQ13702 412 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 TUBA3CQ13748 450 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 SIM2Q14190 667 aaPredicted RBP7.88□□□□□ -1.15
VAMP3-201ENST00000054666 FGL2Q14314 439 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 SLC5A12Q1EHB4 618 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 MPEG1Q2M385 716 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 CTU2Q2VPK5 515 aaKnown RBP7.88□□□□□ -1.15
VAMP3-201ENST00000054666 SPDYE7PQ495Y7 208 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 KIAA1614Q5VZ46 1190 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 CYP4Z1Q86W10 505 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 ZC3H7AQ8IWR0 971 aaKnown RBP7.88□□□□□ -1.15
VAMP3-201ENST00000054666 ZNF566Q969W8 418 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 DTNBP1Q96EV8 351 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 ZBED6CLQ96FA7 236 aaPredicted RBP7.88□□□□□ -1.15
VAMP3-201ENST00000054666 C7orf34Q96L11 122 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 INSM2Q96T92 566 aaPredicted RBP7.88□□□□□ -1.15
VAMP3-201ENST00000054666 MENTQ9BUN1 341 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 C1QTNF2Q9BXJ5 285 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 SLC17A9Q9BYT1 436 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 MVB12BQ9H7P6 319 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 LTB4R2Q9NPC1 389 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 SCN3BQ9NY72 215 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 EBF1Q9UH73 591 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 CDC14AQ9UNH5 594 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 WDR37Q9Y2I8 494 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.88□□□□□ -1.15
VAMP3-201ENST00000054666 TPRKBQ9Y3C4 175 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.88□□□□□ -1.15
VAMP3-201ENST00000054666 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.88□□□□□ -1.15
VAMP3-201ENST00000054666 TMEM247A6NEH6 219 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 K7EQS6 105 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 LATO43561 262 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 CLEC3AO75596 197 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 BSGP35613 385 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 CSNK1G2P78368 415 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 C2orf27AQ580R0 203 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 KIAA1211LQ6NV74 962 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 CCDC80Q76M96 950 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 DNAJC5GQ8N7S2 189 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 LINC01555Q8NAE3 123 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 BPIFB6Q8NFQ5 453 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 OR13F1Q8NGS4 319 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 OR2L8Q8NGY9 312 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 CAMK1GQ96NX5 476 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 NODALQ96S42 347 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 BARD1Q99728 777 aaKnown RBP7.88□□□□□ -1.15
VAMP3-201ENST00000054666 MYOCQ99972 504 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 FAIM2Q9BWQ8 316 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 CCDC90BQ9GZT6 254 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 MKRN2Q9H000 416 aaKnown RBP7.88□□□□□ -1.15
VAMP3-201ENST00000054666 LIN28AQ9H9Z2 209 aaKnown RBP7.88□□□□□ -1.15
VAMP3-201ENST00000054666 PREBQ9HCU5 417 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 MRPS30Q9NP92 439 aaKnown RBP7.88□□□□□ -1.15
VAMP3-201ENST00000054666 C1GALT1Q9NS00 363 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 THSD1Q9NS62 852 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 GPATCH2Q9NW75 528 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 SCML1Q9UN30 329 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 SLC17A4Q9Y2C5 497 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 TESMINQ9Y4I5 508 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 HEBP2Q9Y5Z4 205 aa7.88□□□□□ -1.15
VAMP3-201ENST00000054666 TBC1D3DA0A087WVF3 549 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 TBC1D3IA0A087WXS9 549 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 TBC1D3EA0A087X179 549 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 TBC1D3KA0A087X1G2 549 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 TRBC2A0A5B9 178 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 TBC1D3FA6NER0 549 aaPredicted RBP7.87□□□□□ -1.15
VAMP3-201ENST00000054666 TBC1D3LB9A6J9 549 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 H3BMQ9 156 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 DNAJB5O75953 348 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 PDE9AO76083 593 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 KLHL18O94889 574 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 CEACAM5P06731 702 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 TBC1D3HP0C7X1 549 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 AGXTP21549 392 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 MAT2AP31153 395 aaKnown RBP7.87□□□□□ -1.15
VAMP3-201ENST00000054666 CRYBA2P53672 197 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 TRA2BP62995 288 aaKnown RBP7.87□□□□□ -1.15
VAMP3-201ENST00000054666 ABATP80404 500 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 PRDX1Q06830 199 aaKnown RBP7.87□□□□□ -1.15
VAMP3-201ENST00000054666 HSPB3Q12988 150 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 MLF2Q15773 248 aaPredicted RBP7.87□□□□□ -1.15
VAMP3-201ENST00000054666 UAP1L1Q3KQV9 507 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms