RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 CHI3L1P36222 383 aaPredicted RBP13.43□□□□□ -0.26
USH1C-201ENST00000005226 CTSCP53634 463 aa13.43□□□□□ -0.26
USH1C-201ENST00000005226 CDC42P60953 191 aa13.43□□□□□ -0.26
USH1C-201ENST00000005226 MRPS15P82914 257 aaKnown RBP13.43□□□□□ -0.26
USH1C-201ENST00000005226 LRRC74AQ0VAA2 488 aa13.43□□□□□ -0.26
USH1C-201ENST00000005226 PLAG1Q6DJT9 500 aa13.43□□□□□ -0.26
USH1C-201ENST00000005226 FRMPD2BQ6IN97 320 aa13.43□□□□□ -0.26
USH1C-201ENST00000005226 ARMCX6Q7L4S7 300 aa13.43□□□□□ -0.26
USH1C-201ENST00000005226 ZNF367Q7RTV3 350 aa13.43□□□□□ -0.26
USH1C-201ENST00000005226 HSD11B1LQ7Z5J1 315 aa13.43□□□□□ -0.26
USH1C-201ENST00000005226 ZNF461Q8TAF7 563 aa13.43□□□□□ -0.26
USH1C-201ENST00000005226 ASB15Q8WXK1 588 aa13.43□□□□□ -0.26
USH1C-201ENST00000005226 TMEM203Q969S6 136 aa13.43□□□□□ -0.26
USH1C-201ENST00000005226 RSPO3Q9BXY4 272 aaPredicted RBP13.43□□□□□ -0.26
USH1C-201ENST00000005226 MOV10Q9HCE1 1003 aaKnown RBP13.43□□□□□ -0.26
USH1C-201ENST00000005226 C1GALT1Q9NS00 363 aa13.43□□□□□ -0.26
USH1C-201ENST00000005226 CFAP97Q9P2B7 532 aa13.43□□□□□ -0.26
USH1C-201ENST00000005226 EFCAB10A6NFE3 127 aa13.42□□□□□ -0.26
USH1C-201ENST00000005226 TSPAN6O43657 245 aa13.42□□□□□ -0.26
USH1C-201ENST00000005226 RECKO95980 971 aa13.42□□□□□ -0.26
USH1C-201ENST00000005226 CLEC2LP0C7M8 214 aa13.42□□□□□ -0.26
USH1C-201ENST00000005226 ETV3P41162 512 aa13.42□□□□□ -0.26
USH1C-201ENST00000005226 CRISP1P54107 249 aa13.42□□□□□ -0.26
USH1C-201ENST00000005226 NKX3-2P78367 333 aa13.42□□□□□ -0.26
USH1C-201ENST00000005226 C2orf80Q0P641 193 aa13.42□□□□□ -0.26
USH1C-201ENST00000005226 TEAD4Q15561 434 aa13.42□□□□□ -0.26
USH1C-201ENST00000005226 TRIM60Q495X7 471 aa13.42□□□□□ -0.26
USH1C-201ENST00000005226 ANXA8L1Q5VT79 327 aa13.42□□□□□ -0.26
USH1C-201ENST00000005226 CLP1Q92989 425 aaKnown RBP13.42□□□□□ -0.26
USH1C-201ENST00000005226 PIP5K1AQ99755 562 aa13.42□□□□□ -0.26
USH1C-201ENST00000005226 TAS2R9Q9NYW1 312 aa13.42□□□□□ -0.26
USH1C-201ENST00000005226 FFAR1O14842 300 aa13.42□□□□□ -0.26
USH1C-201ENST00000005226 NDUFB5O43674 189 aa13.42□□□□□ -0.26
USH1C-201ENST00000005226 SLITRK5O94991 958 aa13.42□□□□□ -0.26
USH1C-201ENST00000005226 PTPN2P17706 415 aa13.42□□□□□ -0.26
USH1C-201ENST00000005226 CBLP22681 906 aa13.42□□□□□ -0.26
USH1C-201ENST00000005226 CXCR2P25025 360 aa13.42□□□□□ -0.26
USH1C-201ENST00000005226 TIA1P31483 386 aaKnown RBP eCLIP13.42□□□□□ -0.26
USH1C-201ENST00000005226 XCR1P46094 333 aa13.42□□□□□ -0.26
USH1C-201ENST00000005226 PXNP49023 591 aaPredicted RBP13.42□□□□□ -0.26
USH1C-201ENST00000005226 AP1S2P56377 157 aa13.42□□□□□ -0.26
USH1C-201ENST00000005226 OLR1P78380 273 aa13.42□□□□□ -0.26
USH1C-201ENST00000005226 SLAMF1Q13291 335 aa13.42□□□□□ -0.26
USH1C-201ENST00000005226 ARMC4Q5T2S8 1044 aa13.42□□□□□ -0.26
USH1C-201ENST00000005226 Q6ZVU0 165 aa13.42□□□□□ -0.26
USH1C-201ENST00000005226 RBM45Q8IUH3 476 aaKnown RBP13.42□□□□□ -0.26
USH1C-201ENST00000005226 GPR65Q8IYL9 337 aa13.42□□□□□ -0.26
USH1C-201ENST00000005226 C2orf73Q8N5S3 287 aaPredicted RBP13.42□□□□□ -0.26
USH1C-201ENST00000005226 PIK3R3Q92569 461 aa13.42□□□□□ -0.26
USH1C-201ENST00000005226 ST6GAL2Q96JF0 529 aa13.42□□□□□ -0.26
USH1C-201ENST00000005226 WFDC6Q9BQY6 131 aa13.42□□□□□ -0.26
USH1C-201ENST00000005226 MTG2Q9H4K7 406 aa13.42□□□□□ -0.26
USH1C-201ENST00000005226 CLN6Q9NWW5 311 aa13.42□□□□□ -0.26
USH1C-201ENST00000005226 PCDH10Q9P2E7 1040 aa13.42□□□□□ -0.26
USH1C-201ENST00000005226 TBC1D14Q9P2M4 693 aa13.42□□□□□ -0.26
USH1C-201ENST00000005226 ZNF282Q9UDV7 671 aaPredicted RBP13.42□□□□□ -0.26
USH1C-201ENST00000005226 FTSJ1Q9UET6 329 aa13.42□□□□□ -0.26
USH1C-201ENST00000005226 CFL2Q9Y281 166 aa13.42□□□□□ -0.26
USH1C-201ENST00000005226 PLK4O00444 970 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 APOL3O95236 402 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 CSF2P04141 144 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 CKMP06732 381 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 IMPA1P29218 277 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 SSTR4P31391 388 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 OPRD1P41143 372 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 LIM2P55344 173 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 PUM1Q14671 1186 aaKnown RBP eCLIP13.41□□□□□ -0.26
USH1C-201ENST00000005226 ZNF79Q15937 498 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 PLEKHS1Q5SXH7 462 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 GRHL2Q6ISB3 625 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 TTC23LQ6PF05 361 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 Q6ZNB5 142 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 TMCO2Q7Z6W1 182 aaPredicted RBP13.41□□□□□ -0.26
USH1C-201ENST00000005226 RNF180Q86T96 592 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 NPAS4Q8IUM7 802 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 TAGAPQ8N103 731 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 CDCA4Q9BXL8 241 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 MKI67P46013 3256 aaKnown RBP13.41□□□□□ -0.26
USH1C-201ENST00000005226 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.41□□□□□ -0.26
USH1C-201ENST00000005226 A0A1W2PQ09 198 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 SERTM1A2A2V5 107 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 H0YIV9 168 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 CA12O43570 354 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 EIF2S1P05198 315 aaKnown RBP13.41□□□□□ -0.26
USH1C-201ENST00000005226 ASMTP46597 345 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 TAS2R50P59544 299 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 SNRPD1P62314 119 aaKnown RBP13.41□□□□□ -0.26
USH1C-201ENST00000005226 GPR50Q13585 617 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 EIF4HQ15056 248 aaKnown RBP13.41□□□□□ -0.26
USH1C-201ENST00000005226 SEC23BQ15437 767 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 TBRG1Q3YBR2 411 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 ZFP69Q49AA0 526 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 ZNF544Q6NX49 715 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 C19orf48Q6RUI8 117 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 ZNF517Q6ZMY9 492 aaPredicted RBP13.41□□□□□ -0.26
USH1C-201ENST00000005226 COMMD6Q7Z4G1 85 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 HMGN2P46Q86SG4 172 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 IQCF1Q8N6M8 205 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 ZNF740Q8NDX6 193 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 LILRB4Q8NHJ6 448 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms