RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Gabrr3B2RXA8 464 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Hmgb3O54879 200 aaKnown RBP16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Slc22a2O70577 553 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Six3Q62233 333 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Olfr58Q7TRF6 309 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Rhbdf2Q80WQ6 827 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Lrrc20Q8CI70 184 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Hemk1Q921L7 340 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Fam122cQ9D5J5 180 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Elovl2Q9JLJ4 292 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 FauP35545 74 aaKnown RBP16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Defa11P50709 85 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 MitfQ08874 526 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Fahd2Q3TC72 313 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 SprQ64105 261 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Sec24dQ6NXL1 1032 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 PcnpQ6P8I4 178 aaKnown RBP16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 ItpkaQ8R071 459 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Pafah2Q8VDG7 390 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 PyurfQ9D1C3 112 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Bace2Q9JL18 514 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Acot2Q9QYR9 453 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Mup18A2BIM8 181 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Hist1h2abC0HKE1 130 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Hist1h2acC0HKE2 130 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Hist1h2adC0HKE3 130 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Hist1h2aeC0HKE4 130 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Hist1h2agC0HKE5 130 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Hist1h2aiC0HKE6 130 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Hist1h2anC0HKE7 130 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Hist1h2aoC0HKE8 130 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Hist1h2apC0HKE9 130 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Gm10717D3Z1I8 228 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Vmn1r12G5E8G1 307 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Dpysl2O08553 572 aaKnown RBP16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Rem1O35929 297 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Mup11P04938 181 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Rack1P68040 317 aaKnown RBP16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Prelid2Q0VBB0 177 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Gm21320Q4FZE8 181 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Tlx2Q61663 284 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Hist3h2aQ8BFU2 130 aaKnown RBP16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Slco6c1Q8C0X7 706 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Hist1h2afQ8CGP5 130 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Hist1h2ahQ8CGP6 128 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Hist1h2akQ8CGP7 130 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 H2afjQ8R1M2 129 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 AspaQ8R3P0 312 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Sdcbp2Q99JZ0 292 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 4933436I01RikQ9D3T1 429 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 SgshQ9EQ08 502 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Clic1Q9Z1Q5 241 aaKnown RBP16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Esp18A8R0V1 91 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Cd247P24161 164 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Pxmp2P42925 194 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 InhaQ04997 366 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Spryd7Q3TFQ1 196 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Crtc2Q3U182 692 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 RbfaQ6P3B9 350 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Sat2Q6P8J2 170 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Tatdn1Q6P8M1 295 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Oog2Q7TPX8 476 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Crls1Q80ZM8 303 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Zdhhc1Q8R0N9 484 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Mgat4dQ9D4R2 373 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Olfr716Q9EPG6 314 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Dpysl5Q9EQF6 564 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Slc29a1Q9JIM1 460 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Rab25Q9WTL2 213 aa16.18■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Gm13212B1ASQ7 799 aa16.17■□□□□ 0.18
Col17a1-201ENSMUST00000026045 GzmkO35205 263 aa16.17■□□□□ 0.18
Col17a1-201ENSMUST00000026045 CtssO70370 340 aa16.17■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Hoxc13P50207 328 aa16.17■□□□□ 0.18
Col17a1-201ENSMUST00000026045 MslnQ61468 625 aa16.17■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Zpbp2Q6X786 326 aa16.17■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Zbtb26Q8C8S0 451 aa16.17■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Nudt14Q9D142 222 aa16.17■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Nfkb2Q9WTK5 899 aa16.17■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Xpnpep2B1AVD1 674 aa16.17■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Btbd16E9Q173 522 aa16.17■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Gm10722F6VLK5 217 aa16.17■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Slc7a2P18581 657 aa16.17■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Gna13P27601 377 aa16.17■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Rab5cP35278 216 aa16.17■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Htr2aP35363 471 aa16.17■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Rpl6P47911 296 aaKnown RBP16.17■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Q3TTL0 348 aa16.17■□□□□ 0.18
Col17a1-201ENSMUST00000026045 BB287469Q3UT53 144 aa16.17■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Tmub2Q3V209 319 aa16.17■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Smarcd3Q6P9Z1 483 aa16.17■□□□□ 0.18
Col17a1-201ENSMUST00000026045 PeloQ80X73 385 aa16.17■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Cxxc5Q91WA4 317 aaKnown RBP16.17■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Cyp2d22Q9JKY7 500 aa16.17■□□□□ 0.18
Col17a1-201ENSMUST00000026045 GghQ9Z0L8 317 aa16.17■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Eif2b3B1AUN2 452 aaKnown RBP16.17■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Acp4D3YTS9 425 aa16.17■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Pbx3O35317 434 aa16.17■□□□□ 0.18
Col17a1-201ENSMUST00000026045 DctP29812 517 aa16.17■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Ndst2P52850 883 aa16.17■□□□□ 0.18
Col17a1-201ENSMUST00000026045 Kcnab3P97382 249 aa16.17■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 65.7 ms