RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	FAM153C	Q494X1	144 aa		14.15	□□□□□ -0.14
PHGDH-231	ENST00000641939	TECRL	Q5HYJ1	363 aa		14.15	□□□□□ -0.14
PHGDH-231	ENST00000641939	LGSN	Q5TDP6	509 aa		14.15	□□□□□ -0.14
PHGDH-231	ENST00000641939	ADNP2	Q6IQ32	1131 aa		14.15	□□□□□ -0.14
PHGDH-231	ENST00000641939	TRIM40	Q6P9F5	258 aa		14.15	□□□□□ -0.14
PHGDH-231	ENST00000641939	QSOX2	Q6ZRP7	698 aa		14.15	□□□□□ -0.14
PHGDH-231	ENST00000641939	LINC00696	Q6ZRV3	163 aa		14.15	□□□□□ -0.14
PHGDH-231	ENST00000641939	IQCK	Q8N0W5	287 aa		14.15	□□□□□ -0.14
PHGDH-231	ENST00000641939	CA13	Q8N1Q1	262 aa		14.15	□□□□□ -0.14
PHGDH-231	ENST00000641939	TEX9	Q8N6V9	391 aa		14.15	□□□□□ -0.14
PHGDH-231	ENST00000641939	OR2L5	Q8NG80	312 aa		14.15	□□□□□ -0.14
PHGDH-231	ENST00000641939	TSLP	Q969D9	159 aa		14.15	□□□□□ -0.14
PHGDH-231	ENST00000641939	NPL	Q9BXD5	320 aa	Predicted RBP	14.15	□□□□□ -0.14
PHGDH-231	ENST00000641939	L2HGDH	Q9H9P8	463 aa		14.15	□□□□□ -0.14
PHGDH-231	ENST00000641939	CPSF2	Q9P2I0	782 aa	Known RBP	14.15	□□□□□ -0.14
PHGDH-231	ENST00000641939	ANGPTL3	Q9Y5C1	460 aa		14.15	□□□□□ -0.14
PHGDH-231	ENST00000641939		A0A0G2JN53	185 aa		14.14	□□□□□ -0.15
PHGDH-231	ENST00000641939	PRMT3	O60678	531 aa		14.14	□□□□□ -0.15
PHGDH-231	ENST00000641939	ZIC2	O95409	532 aa	Predicted RBP	14.14	□□□□□ -0.15
PHGDH-231	ENST00000641939	UQCRH	P07919	91 aa		14.14	□□□□□ -0.15
PHGDH-231	ENST00000641939	ITGAM	P11215	1152 aa		14.14	□□□□□ -0.15
PHGDH-231	ENST00000641939	SOX11	P35716	441 aa		14.14	□□□□□ -0.15
PHGDH-231	ENST00000641939	PLA2G16	P53816	162 aa		14.14	□□□□□ -0.15
PHGDH-231	ENST00000641939	OR4D2	P58180	307 aa		14.14	□□□□□ -0.15
PHGDH-231	ENST00000641939	ACTN3	Q08043	901 aa	Predicted RBP	14.14	□□□□□ -0.15
PHGDH-231	ENST00000641939	TGM3	Q08188	693 aa		14.14	□□□□□ -0.15
PHGDH-231	ENST00000641939	PCBP2	Q15366	365 aa	Known RBP eCLIP	14.14	□□□□□ -0.15
PHGDH-231	ENST00000641939	BTBD16	Q32M84	506 aa		14.14	□□□□□ -0.15
PHGDH-231	ENST00000641939	SFT2D3	Q587I9	215 aa		14.14	□□□□□ -0.15
PHGDH-231	ENST00000641939	PLAG1	Q6DJT9	500 aa		14.14	□□□□□ -0.15
PHGDH-231	ENST00000641939	GRHL2	Q6ISB3	625 aa		14.14	□□□□□ -0.15
PHGDH-231	ENST00000641939	METTL2B	Q6P1Q9	378 aa	Known RBP	14.14	□□□□□ -0.15
PHGDH-231	ENST00000641939	MED27	Q6P2C8	311 aa		14.14	□□□□□ -0.15
PHGDH-231	ENST00000641939	ADGRD1	Q6QNK2	874 aa		14.14	□□□□□ -0.15
PHGDH-231	ENST00000641939	ATCAY	Q86WG3	371 aa		14.14	□□□□□ -0.15
PHGDH-231	ENST00000641939	LAS2	Q8IYD9	372 aa		14.14	□□□□□ -0.15
PHGDH-231	ENST00000641939	SIRT6	Q8N6T7	355 aa		14.14	□□□□□ -0.15
PHGDH-231	ENST00000641939	DNAJB14	Q8TBM8	379 aa		14.14	□□□□□ -0.15
PHGDH-231	ENST00000641939	SCYL1	Q96KG9	808 aa		14.14	□□□□□ -0.15
PHGDH-231	ENST00000641939	PTCHD1	Q96NR3	888 aa		14.14	□□□□□ -0.15
PHGDH-231	ENST00000641939	QRFPR	Q96P65	431 aa		14.14	□□□□□ -0.15
PHGDH-231	ENST00000641939	TXLNGY	Q9BZA5	131 aa		14.14	□□□□□ -0.15
PHGDH-231	ENST00000641939	PTGFRN	Q9P2B2	879 aa		14.14	□□□□□ -0.15
PHGDH-231	ENST00000641939	TNPO3	Q9Y5L0	923 aa	Known RBP	14.14	□□□□□ -0.15
PHGDH-231	ENST00000641939	CSAG2	Q9Y5P2	127 aa		14.14	□□□□□ -0.15
PHGDH-231	ENST00000641939	DOPEY2	Q9Y3R5	2298 aa		14.14	□□□□□ -0.15
PHGDH-231	ENST00000641939	ASH1L	Q9NR48	2969 aa	Known RBP	14.13	□□□□□ -0.15
PHGDH-231	ENST00000641939	HIVEP3	Q5T1R4	2406 aa		14.13	□□□□□ -0.15
PHGDH-231	ENST00000641939	USP9X	Q93008	2570 aa	Predicted RBP	14.13	□□□□□ -0.15
PHGDH-231	ENST00000641939	LRRC14B	A6NHZ5	514 aa		14.13	□□□□□ -0.15
PHGDH-231	ENST00000641939	B3GALT2	O43825	422 aa		14.13	□□□□□ -0.15
PHGDH-231	ENST00000641939	PCNA	P12004	261 aa		14.13	□□□□□ -0.15
PHGDH-231	ENST00000641939	GCA	P28676	217 aa		14.13	□□□□□ -0.15
PHGDH-231	ENST00000641939	SERPINB1	P30740	379 aa		14.13	□□□□□ -0.15
PHGDH-231	ENST00000641939	PIK3CG	P48736	1102 aa		14.13	□□□□□ -0.15
PHGDH-231	ENST00000641939	BTG2	P78543	158 aa		14.13	□□□□□ -0.15
PHGDH-231	ENST00000641939	GTF2H2	Q13888	395 aa		14.13	□□□□□ -0.15
PHGDH-231	ENST00000641939	RUNX2	Q13950	521 aa		14.13	□□□□□ -0.15
PHGDH-231	ENST00000641939	SLC29A2	Q14542	456 aa		14.13	□□□□□ -0.15
PHGDH-231	ENST00000641939	EXT1	Q16394	746 aa		14.13	□□□□□ -0.15
PHGDH-231	ENST00000641939	PRR30	Q53SZ7	412 aa	Predicted RBP	14.13	□□□□□ -0.15
PHGDH-231	ENST00000641939	TEX35	Q5T0J7	233 aa		14.13	□□□□□ -0.15
PHGDH-231	ENST00000641939	GTF2H2C	Q6P1K8	395 aa		14.13	□□□□□ -0.15
PHGDH-231	ENST00000641939	ABHD17C	Q6PCB6	329 aa		14.13	□□□□□ -0.15
PHGDH-231	ENST00000641939	PAPD4	Q6PIY7	484 aa	Known RBP	14.13	□□□□□ -0.15
PHGDH-231	ENST00000641939	CUZD1	Q86UP6	607 aa		14.13	□□□□□ -0.15
PHGDH-231	ENST00000641939	GSPT2	Q8IYD1	628 aa	Known RBP	14.13	□□□□□ -0.15
PHGDH-231	ENST00000641939	EIF1AD	Q8N9N8	165 aa	Known RBP	14.13	□□□□□ -0.15
PHGDH-231	ENST00000641939	SRFBP1	Q8NEF9	429 aa	Known RBP	14.13	□□□□□ -0.15
PHGDH-231	ENST00000641939	OR7G3	Q8NG95	312 aa		14.13	□□□□□ -0.15
PHGDH-231	ENST00000641939	ZNF473	Q8WTR7	871 aa	Known RBP	14.13	□□□□□ -0.15
PHGDH-231	ENST00000641939	MTBP	Q96DY7	904 aa		14.13	□□□□□ -0.15
PHGDH-231	ENST00000641939	F2RL3	Q96RI0	385 aa		14.13	□□□□□ -0.15
PHGDH-231	ENST00000641939	LPAR4	Q99677	370 aa		14.13	□□□□□ -0.15
PHGDH-231	ENST00000641939	COPS7B	Q9H9Q2	264 aa	Predicted RBP	14.13	□□□□□ -0.15
PHGDH-231	ENST00000641939	PRM3	Q9NNZ6	103 aa		14.13	□□□□□ -0.15
PHGDH-231	ENST00000641939	PRDM9	Q9NQV7	894 aa		14.13	□□□□□ -0.15
PHGDH-231	ENST00000641939	XPR1	Q9UBH6	696 aa		14.13	□□□□□ -0.15
PHGDH-231	ENST00000641939	ADGRE2	Q9UHX3	823 aa		14.13	□□□□□ -0.15
PHGDH-231	ENST00000641939	TMCO1	Q9UM00	188 aa		14.13	□□□□□ -0.15
PHGDH-231	ENST00000641939	PCDHGA10	Q9Y5H3	936 aa		14.13	□□□□□ -0.15
PHGDH-231	ENST00000641939	DYTN	A2CJ06	578 aa		14.12	□□□□□ -0.15
PHGDH-231	ENST00000641939	FAM227A	F5H4B4	570 aa		14.12	□□□□□ -0.15
PHGDH-231	ENST00000641939	E2F3	O00716	465 aa		14.12	□□□□□ -0.15
PHGDH-231	ENST00000641939	SMIM24	O75264	130 aa		14.12	□□□□□ -0.15
PHGDH-231	ENST00000641939	VPS4B	O75351	444 aa		14.12	□□□□□ -0.15
PHGDH-231	ENST00000641939	SIX3	O95343	332 aa	Predicted RBP	14.12	□□□□□ -0.15
PHGDH-231	ENST00000641939	MAOA	P21397	527 aa		14.12	□□□□□ -0.15
PHGDH-231	ENST00000641939	MTTP	P55157	894 aa		14.12	□□□□□ -0.15
PHGDH-231	ENST00000641939	RAB38	P57729	211 aa		14.12	□□□□□ -0.15
PHGDH-231	ENST00000641939	ZNF169	Q14929	603 aa	Predicted RBP	14.12	□□□□□ -0.15
PHGDH-231	ENST00000641939	TLR1	Q15399	786 aa		14.12	□□□□□ -0.15
PHGDH-231	ENST00000641939	LIPJ	Q5W064	366 aa		14.12	□□□□□ -0.15
PHGDH-231	ENST00000641939	B3GNTL1	Q67FW5	361 aa	Predicted RBP	14.12	□□□□□ -0.15
PHGDH-231	ENST00000641939	TIFAB	Q6ZNK6	161 aa		14.12	□□□□□ -0.15
PHGDH-231	ENST00000641939	GOLGA7	Q7Z5G4	137 aa		14.12	□□□□□ -0.15
PHGDH-231	ENST00000641939	MYLK4	Q86YV6	388 aa	Predicted RBP	14.12	□□□□□ -0.15
PHGDH-231	ENST00000641939	AMER2	Q8N7J2	671 aa		14.12	□□□□□ -0.15
PHGDH-231	ENST00000641939	PTGR2	Q8N8N7	351 aa	Predicted RBP	14.12	□□□□□ -0.15
PHGDH-231	ENST00000641939	GALNT11	Q8NCW6	608 aa		14.12	□□□□□ -0.15

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