RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 SMIM10Q96HG1 83 aa20.46■□□□□ 0.87
TSPAN9-208ENST00000640568 YIPF2Q9BWQ6 316 aa20.46■□□□□ 0.87
TSPAN9-208ENST00000640568 NUF2Q9BZD4 464 aa20.46■□□□□ 0.87
TSPAN9-208ENST00000640568 FAM53CQ9NYF3 392 aa20.46■□□□□ 0.87
TSPAN9-208ENST00000640568 PADI1Q9ULC6 663 aa20.46■□□□□ 0.87
TSPAN9-208ENST00000640568 ARHGAP10A1A4S6 786 aa20.45■□□□□ 0.86
TSPAN9-208ENST00000640568 TRPC5OSA6NMA1 111 aa20.45■□□□□ 0.86
TSPAN9-208ENST00000640568 HDAC3O15379 428 aa20.45■□□□□ 0.86
TSPAN9-208ENST00000640568 RAD1O60671 282 aa20.45■□□□□ 0.86
TSPAN9-208ENST00000640568 RDH16O75452 317 aa20.45■□□□□ 0.86
TSPAN9-208ENST00000640568 GYS2P54840 703 aa20.45■□□□□ 0.86
TSPAN9-208ENST00000640568 ACSM2AQ08AH3 577 aa20.45■□□□□ 0.86
TSPAN9-208ENST00000640568 ACSM2BQ68CK6 577 aa20.45■□□□□ 0.86
TSPAN9-208ENST00000640568 PDSS2Q86YH6 399 aa20.45■□□□□ 0.86
TSPAN9-208ENST00000640568 METTL4Q8N3J2 472 aa20.45■□□□□ 0.86
TSPAN9-208ENST00000640568 QRFPRQ96P65 431 aa20.45■□□□□ 0.86
TSPAN9-208ENST00000640568 SERINC2Q96SA4 455 aa20.45■□□□□ 0.86
TSPAN9-208ENST00000640568 LHX9Q9NQ69 397 aa20.45■□□□□ 0.86
TSPAN9-208ENST00000640568 WDR70Q9NW82 654 aa20.45■□□□□ 0.86
TSPAN9-208ENST00000640568 IFT80Q9P2H3 777 aaPredicted RBP20.45■□□□□ 0.86
TSPAN9-208ENST00000640568 GPN3Q9UHW5 284 aaPredicted RBP20.45■□□□□ 0.86
TSPAN9-208ENST00000640568 C9J4A7 227 aa20.44■□□□□ 0.86
TSPAN9-208ENST00000640568 EDF1O60869 148 aaKnown RBP20.44■□□□□ 0.86
TSPAN9-208ENST00000640568 HIST1H1TP22492 207 aaPredicted RBP20.44■□□□□ 0.86
TSPAN9-208ENST00000640568 CERS1P27544 350 aa20.44■□□□□ 0.86
TSPAN9-208ENST00000640568 SNRPNP63162 240 aaKnown RBP20.44■□□□□ 0.86
TSPAN9-208ENST00000640568 SLC9A5Q14940 896 aa20.44■□□□□ 0.86
TSPAN9-208ENST00000640568 NKAIN1Q4KMZ8 207 aa20.44■□□□□ 0.86
TSPAN9-208ENST00000640568 ATP6AP1LQ52LC2 224 aa20.44■□□□□ 0.86
TSPAN9-208ENST00000640568 CYP20A1Q6UW02 462 aa20.44■□□□□ 0.86
TSPAN9-208ENST00000640568 UBE3DQ7Z6J8 389 aa20.44■□□□□ 0.86
TSPAN9-208ENST00000640568 C1orf52Q8N6N3 182 aaKnown RBP20.44■□□□□ 0.86
TSPAN9-208ENST00000640568 TUBGCP3Q96CW5 907 aa20.44■□□□□ 0.86
TSPAN9-208ENST00000640568 SORBS1Q9BX66 1292 aaKnown RBP20.44■□□□□ 0.86
TSPAN9-208ENST00000640568 LRTM1Q9HBL6 345 aa20.44■□□□□ 0.86
TSPAN9-208ENST00000640568 PRDM7Q9NQW5 492 aa20.44■□□□□ 0.86
TSPAN9-208ENST00000640568 ACSL6Q9UKU0 697 aa20.44■□□□□ 0.86
TSPAN9-208ENST00000640568 SCN2AQ99250 2005 aa20.44■□□□□ 0.86
TSPAN9-208ENST00000640568 ATP6AP2A0A1C7CYW4 349 aa20.43■□□□□ 0.86
TSPAN9-208ENST00000640568 MED19A0JLT2 244 aaPredicted RBP20.43■□□□□ 0.86
TSPAN9-208ENST00000640568 SEC22BO75396 215 aa20.43■□□□□ 0.86
TSPAN9-208ENST00000640568 ATP6AP2O75787 350 aa20.43■□□□□ 0.86
TSPAN9-208ENST00000640568 MYO1DO94832 1006 aa20.43■□□□□ 0.86
TSPAN9-208ENST00000640568 LIPCP11150 499 aa20.43■□□□□ 0.86
TSPAN9-208ENST00000640568 ATP5A1P25705 553 aaKnown RBP20.43■□□□□ 0.86
TSPAN9-208ENST00000640568 OLR1P78380 273 aa20.43■□□□□ 0.86
TSPAN9-208ENST00000640568 TBL3Q12788 808 aaKnown RBP20.43■□□□□ 0.86
TSPAN9-208ENST00000640568 DSG2Q14126 1118 aa20.43■□□□□ 0.86
TSPAN9-208ENST00000640568 GALNTL6Q49A17 601 aa20.43■□□□□ 0.86
TSPAN9-208ENST00000640568 XKR7Q5GH72 579 aa20.43■□□□□ 0.86
TSPAN9-208ENST00000640568 ZNF385CQ66K41 422 aaPredicted RBP20.43■□□□□ 0.86
TSPAN9-208ENST00000640568 ZNF793Q6ZN11 406 aa20.43■□□□□ 0.86
TSPAN9-208ENST00000640568 Q6ZSR9 355 aa20.43■□□□□ 0.86
TSPAN9-208ENST00000640568 TIPARPQ7Z3E1 657 aaKnown RBP20.43■□□□□ 0.86
TSPAN9-208ENST00000640568 CACNA2D3Q8IZS8 1091 aa20.43■□□□□ 0.86
TSPAN9-208ENST00000640568 ACOT4Q8N9L9 421 aa20.43■□□□□ 0.86
TSPAN9-208ENST00000640568 OR2T11Q8NH01 316 aa20.43■□□□□ 0.86
TSPAN9-208ENST00000640568 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.43■□□□□ 0.86
TSPAN9-208ENST00000640568 APIPQ96GX9 242 aa20.43■□□□□ 0.86
TSPAN9-208ENST00000640568 PPP3R2Q96LZ3 170 aa20.43■□□□□ 0.86
TSPAN9-208ENST00000640568 NPLQ9BXD5 320 aaPredicted RBP20.43■□□□□ 0.86
TSPAN9-208ENST00000640568 SPRY4Q9C004 299 aa20.43■□□□□ 0.86
TSPAN9-208ENST00000640568 C1orf109Q9NX04 203 aa20.43■□□□□ 0.86
TSPAN9-208ENST00000640568 HCN3Q9P1Z3 774 aa20.43■□□□□ 0.86
TSPAN9-208ENST00000640568 USH1CQ9Y6N9 552 aa20.43■□□□□ 0.86
TSPAN9-208ENST00000640568 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.43■□□□□ 0.86
TSPAN9-208ENST00000640568 JUNP05412 331 aaKnown RBP20.43■□□□□ 0.86
TSPAN9-208ENST00000640568 KLK1P06870 262 aa20.43■□□□□ 0.86
TSPAN9-208ENST00000640568 PRPH2P23942 346 aa20.43■□□□□ 0.86
TSPAN9-208ENST00000640568 BSGP35613 385 aa20.43■□□□□ 0.86
TSPAN9-208ENST00000640568 PCBP4P57723 403 aaKnown RBP20.43■□□□□ 0.86
TSPAN9-208ENST00000640568 MLIPQ5VWP3 458 aa20.43■□□□□ 0.86
TSPAN9-208ENST00000640568 COMMD6Q7Z4G1 85 aa20.43■□□□□ 0.86
TSPAN9-208ENST00000640568 IL22RA1Q8N6P7 574 aa20.43■□□□□ 0.86
TSPAN9-208ENST00000640568 CHTF18Q8WVB6 975 aa20.43■□□□□ 0.86
TSPAN9-208ENST00000640568 METTL2AQ96IZ6 378 aaKnown RBP20.43■□□□□ 0.86
TSPAN9-208ENST00000640568 CHST8Q9H2A9 424 aa20.43■□□□□ 0.86
TSPAN9-208ENST00000640568 MEAF6Q9HAF1 191 aa20.43■□□□□ 0.86
TSPAN9-208ENST00000640568 CLK4Q9HAZ1 481 aaKnown RBP20.43■□□□□ 0.86
TSPAN9-208ENST00000640568 TRPC4Q9UBN4 977 aa20.43■□□□□ 0.86
TSPAN9-208ENST00000640568 ADAM29Q9UKF5 820 aa20.43■□□□□ 0.86
TSPAN9-208ENST00000640568 MAP4K5Q9Y4K4 846 aa20.43■□□□□ 0.86
TSPAN9-208ENST00000640568 SPACA6W5XKT8 324 aa20.43■□□□□ 0.86
TSPAN9-208ENST00000640568 CCDC88CQ9P219 2028 aa20.42■□□□□ 0.86
TSPAN9-208ENST00000640568 LSM1O15116 133 aaKnown RBP20.42■□□□□ 0.86
TSPAN9-208ENST00000640568 PEX11AO75192 247 aa20.42■□□□□ 0.86
TSPAN9-208ENST00000640568 VPS4BO75351 444 aa20.42■□□□□ 0.86
TSPAN9-208ENST00000640568 RPL38P63173 70 aaKnown RBP20.42■□□□□ 0.86
TSPAN9-208ENST00000640568 GNGT1P63211 74 aa20.42■□□□□ 0.86
TSPAN9-208ENST00000640568 MAT1AQ00266 395 aaKnown RBP20.42■□□□□ 0.86
TSPAN9-208ENST00000640568 OCA2Q04671 838 aa20.42■□□□□ 0.86
TSPAN9-208ENST00000640568 SLAMF1Q13291 335 aa20.42■□□□□ 0.86
TSPAN9-208ENST00000640568 CCNYL2Q5T2Q4 361 aa20.42■□□□□ 0.86
TSPAN9-208ENST00000640568 FAM199XQ6PEV8 388 aaPredicted RBP20.42■□□□□ 0.86
TSPAN9-208ENST00000640568 ZCCHC7Q8N3Z6 543 aaKnown RBP20.42■□□□□ 0.86
TSPAN9-208ENST00000640568 OR5T3Q8NGG3 340 aa20.42■□□□□ 0.86
TSPAN9-208ENST00000640568 C3orf30Q96M34 536 aa20.42■□□□□ 0.86
TSPAN9-208ENST00000640568 CCDC86Q9H6F5 360 aaKnown RBP20.42■□□□□ 0.86
TSPAN9-208ENST00000640568 DDX31Q9H8H2 851 aaKnown RBP20.42■□□□□ 0.86
TSPAN9-208ENST00000640568 FGFR1OP2Q9NVK5 253 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms