RNA–Protein interactions for RNA: ENST00000640027.1

MED17-222, Transcript of mediator complex subunit 17, human

TSL 5

Gene MED17, Length 4,569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MED17-222	ENST00000640027	RBM34	P42696	430 aa	Known RBP	13.43	□□□□□ -0.26
MED17-222	ENST00000640027	ZNF33A	Q06730	810 aa		13.43	□□□□□ -0.26
MED17-222	ENST00000640027	NPY5R	Q15761	445 aa		13.43	□□□□□ -0.26
MED17-222	ENST00000640027	NPTX1	Q15818	432 aa		13.43	□□□□□ -0.26
MED17-222	ENST00000640027	SMG8	Q8ND04	991 aa	Known RBP	13.43	□□□□□ -0.26
MED17-222	ENST00000640027	OR10Q1	Q8NGQ4	319 aa		13.43	□□□□□ -0.26
MED17-222	ENST00000640027	SLCO3A1	Q9UIG8	710 aa		13.43	□□□□□ -0.26
MED17-222	ENST00000640027	AJAP1	Q9UKB5	411 aa	Predicted RBP	13.43	□□□□□ -0.26
MED17-222	ENST00000640027	SH3D21	A4FU49	640 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	ACOX3	O15254	700 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	CAPN5	O15484	640 aa	Predicted RBP	13.42	□□□□□ -0.26
MED17-222	ENST00000640027	SOX14	O95416	240 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	JUND	P17535	347 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	XRCC1	P18887	633 aa	Predicted RBP	13.42	□□□□□ -0.26
MED17-222	ENST00000640027	CBL	P22681	906 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	EIF4H	Q15056	248 aa	Known RBP	13.42	□□□□□ -0.26
MED17-222	ENST00000640027	ALG10B	Q5I7T1	473 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	GATS	Q8NAP1	163 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	DENND6B	Q8NEG7	585 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	SCGB3A2	Q96PL1	93 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	TSGA13	Q96PP4	275 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	13.42	□□□□□ -0.26
MED17-222	ENST00000640027	TMEM248	Q9NWD8	314 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	HLA-DPB1	P04440	258 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	FCER2	P06734	321 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	C8B	P07358	591 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	UFM1	P61960	85 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	CDK10	Q15131	360 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	USP43	Q70EL4	1123 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	CILP2	Q8IUL8	1156 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	MFSD2A	Q8NA29	543 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	GPR62	Q9BZJ7	368 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	DERL2	Q9GZP9	239 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	ZNF700	Q9H0M5	742 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	HEPACAM2	A8MVW5	462 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	MAN2B1	O00754	1011 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	C6orf47	O95873	294 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	ZNF16	P17020	682 aa	Predicted RBP	13.42	□□□□□ -0.26
MED17-222	ENST00000640027	ETV3	P41162	512 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	ZNF542P	Q5EBM4	170 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	FRMD7	Q6ZUT3	714 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	PAQR7	Q86WK9	346 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	INO80E	Q8NBZ0	244 aa	Predicted RBP	13.42	□□□□□ -0.26
MED17-222	ENST00000640027	OR2L2	Q8NH16	312 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	LRIG1	Q96JA1	1093 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	ALPK1	Q96QP1	1244 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	OSBPL7	Q9BZF2	842 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	SFXN1	Q9H9B4	322 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	TIMMDC1	Q9NPL8	285 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	ASB6	Q9NWX5	421 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	EURL	Q9NYK6	297 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	APOBEC3B	Q9UH17	382 aa	Known RBP	13.42	□□□□□ -0.26
MED17-222	ENST00000640027	SIX4	Q9UIU6	781 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	FAM159B	A6NKW6	160 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	OR2AT4	A6NND4	320 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	PROM1	O43490	865 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	PSKH1	P11801	424 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	ITIH1	P19827	911 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	SLC6A6	P31641	620 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	ARPC4	P59998	168 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	NNAT	Q16517	81 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	LACTB2	Q53H82	288 aa	Predicted RBP	13.42	□□□□□ -0.26
MED17-222	ENST00000640027	EIF5AL1	Q6IS14	154 aa	Known RBP	13.42	□□□□□ -0.26
MED17-222	ENST00000640027	REEP3	Q6NUK4	255 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	AQP11	Q8NBQ7	271 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	NSMAF	Q92636	917 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	NINJ1	Q92982	152 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	ASB9	Q96DX5	294 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	TRPV4	Q9HBA0	871 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	GVINP1	Q7Z2Y8	2422 aa		13.42	□□□□□ -0.26
MED17-222	ENST00000640027	NWD2	Q9ULI1	1742 aa		13.41	□□□□□ -0.26
MED17-222	ENST00000640027		A0A1B0GVT2	93 aa		13.41	□□□□□ -0.26
MED17-222	ENST00000640027		A0A1W2PP18	115 aa		13.41	□□□□□ -0.26
MED17-222	ENST00000640027		A6NLC8	198 aa		13.41	□□□□□ -0.26
MED17-222	ENST00000640027	RNF13	O43567	381 aa		13.41	□□□□□ -0.26
MED17-222	ENST00000640027	TSPAN6	O43657	245 aa		13.41	□□□□□ -0.26
MED17-222	ENST00000640027	ITM2A	O43736	263 aa		13.41	□□□□□ -0.26
MED17-222	ENST00000640027	CSTA	P01040	98 aa		13.41	□□□□□ -0.26
MED17-222	ENST00000640027	PVALB	P20472	110 aa	Predicted RBP	13.41	□□□□□ -0.26
MED17-222	ENST00000640027	CTBP2	P56545	445 aa		13.41	□□□□□ -0.26
MED17-222	ENST00000640027	INCA1	Q0VD86	236 aa		13.41	□□□□□ -0.26
MED17-222	ENST00000640027	MRPL49	Q13405	166 aa	Known RBP	13.41	□□□□□ -0.26
MED17-222	ENST00000640027	FLYWCH1	Q4VC44	716 aa		13.41	□□□□□ -0.26
MED17-222	ENST00000640027	NIPAL1	Q6NVV3	410 aa		13.41	□□□□□ -0.26
MED17-222	ENST00000640027	C14orf80	Q86SX3	495 aa		13.41	□□□□□ -0.26
MED17-222	ENST00000640027	PLCZ1	Q86YW0	608 aa		13.41	□□□□□ -0.26
MED17-222	ENST00000640027	ZNF283	Q8N7M2	679 aa		13.41	□□□□□ -0.26
MED17-222	ENST00000640027	OR5T2	Q8NGG2	359 aa		13.41	□□□□□ -0.26
MED17-222	ENST00000640027	ACOT12	Q8WYK0	555 aa		13.41	□□□□□ -0.26
MED17-222	ENST00000640027	DAZL	Q92904	295 aa	Known RBP	13.41	□□□□□ -0.26
MED17-222	ENST00000640027	TMBIM1	Q969X1	311 aa		13.41	□□□□□ -0.26
MED17-222	ENST00000640027	TGM7	Q96PF1	710 aa		13.41	□□□□□ -0.26
MED17-222	ENST00000640027	MED11	Q9P086	117 aa		13.41	□□□□□ -0.26
MED17-222	ENST00000640027	ERVK-18	Q9QC07	812 aa		13.41	□□□□□ -0.26
MED17-222	ENST00000640027	B4GALT7	Q9UBV7	327 aa		13.41	□□□□□ -0.26
MED17-222	ENST00000640027	TMEM5	Q9Y2B1	443 aa		13.41	□□□□□ -0.26
MED17-222	ENST00000640027	SCO2	O43819	266 aa		13.41	□□□□□ -0.26
MED17-222	ENST00000640027	HNRNPA1	P09651	372 aa	Known RBP eCLIP	13.41	□□□□□ -0.26
MED17-222	ENST00000640027	FPR1	P21462	350 aa		13.41	□□□□□ -0.26
MED17-222	ENST00000640027	SLC9A3	P48764	834 aa		13.41	□□□□□ -0.26

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