RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 CHDHQ8NE62 594 aaPredicted RBP14.44□□□□□ -0.1
TRIM3-215ENST00000639856 GOT1L1Q8NHS2 421 aaPredicted RBP14.44□□□□□ -0.1
TRIM3-215ENST00000639856 HSH2DQ96JZ2 352 aa14.44□□□□□ -0.1
TRIM3-215ENST00000639856 INSM2Q96T92 566 aaPredicted RBP14.44□□□□□ -0.1
TRIM3-215ENST00000639856 TUBA1CQ9BQE3 449 aa14.44□□□□□ -0.1
TRIM3-215ENST00000639856 ACAT2Q9BWD1 397 aa14.44□□□□□ -0.1
TRIM3-215ENST00000639856 ASPSCR1Q9BZE9 553 aa14.44□□□□□ -0.1
TRIM3-215ENST00000639856 ADNPQ9H2P0 1102 aa14.44□□□□□ -0.1
TRIM3-215ENST00000639856 EBF1Q9UH73 591 aa14.44□□□□□ -0.1
TRIM3-215ENST00000639856 BAG5Q9UL15 447 aa14.44□□□□□ -0.1
TRIM3-215ENST00000639856 CDC14AQ9UNH5 594 aa14.44□□□□□ -0.1
TRIM3-215ENST00000639856 AP1M2Q9Y6Q5 423 aa14.44□□□□□ -0.1
TRIM3-215ENST00000639856 hCG_2039718K7EN88 272 aa14.43□□□□□ -0.1
TRIM3-215ENST00000639856 CACNB4O00305 520 aaPredicted RBP14.43□□□□□ -0.1
TRIM3-215ENST00000639856 SAP18O00422 153 aaKnown RBP14.43□□□□□ -0.1
TRIM3-215ENST00000639856 FKBP9O95302 570 aa14.43□□□□□ -0.1
TRIM3-215ENST00000639856 NTRK1P04629 796 aa14.43□□□□□ -0.1
TRIM3-215ENST00000639856 FURINP09958 794 aa14.43□□□□□ -0.1
TRIM3-215ENST00000639856 NUDT7P0C024 238 aa14.43□□□□□ -0.1
TRIM3-215ENST00000639856 SRFP11831 508 aa14.43□□□□□ -0.1
TRIM3-215ENST00000639856 GLULP15104 373 aa14.43□□□□□ -0.1
TRIM3-215ENST00000639856 CALRP27797 417 aaKnown RBP14.43□□□□□ -0.1
TRIM3-215ENST00000639856 RPL3P39023 403 aaKnown RBP14.43□□□□□ -0.1
TRIM3-215ENST00000639856 HBA1P69905 142 aa14.43□□□□□ -0.1
TRIM3-215ENST00000639856 PHEXP78562 749 aa14.43□□□□□ -0.1
TRIM3-215ENST00000639856 DMPKQ09013 629 aa14.43□□□□□ -0.1
TRIM3-215ENST00000639856 PDE7AQ13946 482 aa14.43□□□□□ -0.1
TRIM3-215ENST00000639856 MLF2Q15773 248 aaPredicted RBP14.43□□□□□ -0.1
TRIM3-215ENST00000639856 C6orf141Q5SZD1 244 aa14.43□□□□□ -0.1
TRIM3-215ENST00000639856 BROXQ5VW32 411 aa14.43□□□□□ -0.1
TRIM3-215ENST00000639856 METTL4Q8N3J2 472 aa14.43□□□□□ -0.1
TRIM3-215ENST00000639856 ZNF740Q8NDX6 193 aa14.43□□□□□ -0.1
TRIM3-215ENST00000639856 OR4K1Q8NGD4 311 aa14.43□□□□□ -0.1
TRIM3-215ENST00000639856 WDR48Q8TAF3 677 aa14.43□□□□□ -0.1
TRIM3-215ENST00000639856 ZNF420Q8TAQ5 688 aaPredicted RBP14.43□□□□□ -0.1
TRIM3-215ENST00000639856 C16orf78Q8WTQ4 265 aa14.43□□□□□ -0.1
TRIM3-215ENST00000639856 C12orf66Q96MD2 445 aa14.43□□□□□ -0.1
TRIM3-215ENST00000639856 TIMM29Q9BSF4 260 aa14.43□□□□□ -0.1
TRIM3-215ENST00000639856 MENTQ9BUN1 341 aa14.43□□□□□ -0.1
TRIM3-215ENST00000639856 LIN28AQ9H9Z2 209 aaKnown RBP14.43□□□□□ -0.1
TRIM3-215ENST00000639856 MYNNQ9NPC7 610 aa14.43□□□□□ -0.1
TRIM3-215ENST00000639856 TIMMDC1Q9NPL8 285 aa14.43□□□□□ -0.1
TRIM3-215ENST00000639856 IL7RP16871 459 aa14.42□□□□□ -0.1
TRIM3-215ENST00000639856 IGFBP5P24593 272 aa14.42□□□□□ -0.1
TRIM3-215ENST00000639856 DNAJA1P31689 397 aaKnown RBP14.42□□□□□ -0.1
TRIM3-215ENST00000639856 POLR2IP36954 125 aaKnown RBP14.42□□□□□ -0.1
TRIM3-215ENST00000639856 ISL1P61371 349 aa14.42□□□□□ -0.1
TRIM3-215ENST00000639856 CTBSQ01459 385 aa14.42□□□□□ -0.1
TRIM3-215ENST00000639856 MC1RQ01726 317 aa14.42□□□□□ -0.1
TRIM3-215ENST00000639856 CD47Q08722 323 aa14.42□□□□□ -0.1
TRIM3-215ENST00000639856 IL18R1Q13478 541 aa14.42□□□□□ -0.1
TRIM3-215ENST00000639856 CLCA4Q14CN2 919 aa14.42□□□□□ -0.1
TRIM3-215ENST00000639856 SMAD2Q15796 467 aaKnown RBP14.42□□□□□ -0.1
TRIM3-215ENST00000639856 NEDD8Q15843 81 aa14.42□□□□□ -0.1
TRIM3-215ENST00000639856 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.42□□□□□ -0.1
TRIM3-215ENST00000639856 ZNF691Q5VV52 312 aa14.42□□□□□ -0.1
TRIM3-215ENST00000639856 TMIGD1Q6UXZ0 262 aa14.42□□□□□ -0.1
TRIM3-215ENST00000639856 CEP68Q76N32 757 aa14.42□□□□□ -0.1
TRIM3-215ENST00000639856 PIWIL3Q7Z3Z3 882 aaKnown RBP14.42□□□□□ -0.1
TRIM3-215ENST00000639856 CYP4Z1Q86W10 505 aa14.42□□□□□ -0.1
TRIM3-215ENST00000639856 FAM129CQ86XR2 697 aa14.42□□□□□ -0.1
TRIM3-215ENST00000639856 NAGSQ8N159 534 aa14.42□□□□□ -0.1
TRIM3-215ENST00000639856 C12orf43Q96C57 262 aaKnown RBP14.42□□□□□ -0.1
TRIM3-215ENST00000639856 PDXPQ96GD0 296 aa14.42□□□□□ -0.1
TRIM3-215ENST00000639856 BARD1Q99728 777 aaKnown RBP14.42□□□□□ -0.1
TRIM3-215ENST00000639856 IMP3Q9NV31 184 aaKnown RBP14.42□□□□□ -0.1
TRIM3-215ENST00000639856 ACSL5Q9ULC5 683 aa14.42□□□□□ -0.1
TRIM3-215ENST00000639856 FAF1Q9UNN5 650 aaPredicted RBP14.42□□□□□ -0.1
TRIM3-215ENST00000639856 PRSS38A1L453 326 aa14.42□□□□□ -0.1
TRIM3-215ENST00000639856 PRR19A6NJB7 356 aa14.42□□□□□ -0.1
TRIM3-215ENST00000639856 OR52A4PA6NMU1 304 aa14.42□□□□□ -0.1
TRIM3-215ENST00000639856 ABCB7O75027 752 aa14.42□□□□□ -0.1
TRIM3-215ENST00000639856 KLHL18O94889 574 aa14.42□□□□□ -0.1
TRIM3-215ENST00000639856 ITGAMP11215 1152 aa14.42□□□□□ -0.1
TRIM3-215ENST00000639856 ERGP11308 486 aa14.42□□□□□ -0.1
TRIM3-215ENST00000639856 JUNBP17275 347 aaPredicted RBP14.42□□□□□ -0.1
TRIM3-215ENST00000639856 FPR1P21462 350 aa14.42□□□□□ -0.1
TRIM3-215ENST00000639856 PTX3P26022 381 aaPredicted RBP14.42□□□□□ -0.1
TRIM3-215ENST00000639856 DCKP27707 260 aa14.42□□□□□ -0.1
TRIM3-215ENST00000639856 PSMB5P28074 263 aa14.42□□□□□ -0.1
TRIM3-215ENST00000639856 PCGF2P35227 344 aa14.42□□□□□ -0.1
TRIM3-215ENST00000639856 CRYBA2P53672 197 aa14.42□□□□□ -0.1
TRIM3-215ENST00000639856 C2orf80Q0P641 193 aa14.42□□□□□ -0.1
TRIM3-215ENST00000639856 TDGQ13569 410 aa14.42□□□□□ -0.1
TRIM3-215ENST00000639856 TEAD4Q15561 434 aa14.42□□□□□ -0.1
TRIM3-215ENST00000639856 MEP1AQ16819 746 aa14.42□□□□□ -0.1
TRIM3-215ENST00000639856 CTU2Q2VPK5 515 aaKnown RBP14.42□□□□□ -0.1
TRIM3-215ENST00000639856 FAM71E1Q6IPT2 247 aa14.42□□□□□ -0.1
TRIM3-215ENST00000639856 TRIM69Q86WT6 500 aa14.42□□□□□ -0.1
TRIM3-215ENST00000639856 C11orf65Q8NCR3 313 aa14.42□□□□□ -0.1
TRIM3-215ENST00000639856 PIK3C3Q8NEB9 887 aa14.42□□□□□ -0.1
TRIM3-215ENST00000639856 PPCDCQ96CD2 204 aa14.42□□□□□ -0.1
TRIM3-215ENST00000639856 MTERF3Q96E29 417 aa14.42□□□□□ -0.1
TRIM3-215ENST00000639856 CNDP2Q96KP4 475 aaKnown RBP14.42□□□□□ -0.1
TRIM3-215ENST00000639856 DOK1Q99704 481 aa14.42□□□□□ -0.1
TRIM3-215ENST00000639856 TRIT1Q9H3H1 467 aaKnown RBP14.42□□□□□ -0.1
TRIM3-215ENST00000639856 SLC2A4RGQ9NR83 387 aa14.42□□□□□ -0.1
TRIM3-215ENST00000639856 TAC3Q9UHF0 121 aa14.42□□□□□ -0.1
TRIM3-215ENST00000639856 BLOC1S6Q9UL45 172 aa14.42□□□□□ -0.1
TRIM3-215ENST00000639856 DNAH14Q0VDD8 3507 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms