RNA–Protein interactions for RNA: ENST00000638787.1

NECAP1-212, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,067 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-212ENST00000638787 IFT88Q13099 833 aa8.38□□□□□ -1.07
NECAP1-212ENST00000638787 TBR1Q16650 682 aa8.38□□□□□ -1.07
NECAP1-212ENST00000638787 KHDRBS2Q5VWX1 349 aaKnown RBP8.38□□□□□ -1.07
NECAP1-212ENST00000638787 FAM219BQ5XKK7 198 aa8.38□□□□□ -1.07
NECAP1-212ENST00000638787 FRG2Q64ET8 278 aa8.38□□□□□ -1.07
NECAP1-212ENST00000638787 ABHD17CQ6PCB6 329 aa8.38□□□□□ -1.07
NECAP1-212ENST00000638787 FRMD7Q6ZUT3 714 aa8.38□□□□□ -1.07
NECAP1-212ENST00000638787 CHSY3Q70JA7 882 aa8.38□□□□□ -1.07
NECAP1-212ENST00000638787 MRGPREQ86SM8 312 aa8.38□□□□□ -1.07
NECAP1-212ENST00000638787 THAP4Q8WY91 577 aa8.38□□□□□ -1.07
NECAP1-212ENST00000638787 QRFPRQ96P65 431 aa8.38□□□□□ -1.07
NECAP1-212ENST00000638787 FRG2BQ96QU4 278 aa8.38□□□□□ -1.07
NECAP1-212ENST00000638787 MECRQ9BV79 373 aa8.38□□□□□ -1.07
NECAP1-212ENST00000638787 STMN4Q9H169 189 aaPredicted RBP8.38□□□□□ -1.07
NECAP1-212ENST00000638787 OR51B5Q9H339 312 aa8.38□□□□□ -1.07
NECAP1-212ENST00000638787 C3orf18Q9UK00 162 aa8.38□□□□□ -1.07
NECAP1-212ENST00000638787 MAN2B2Q9Y2E5 1009 aa8.38□□□□□ -1.07
NECAP1-212ENST00000638787 ATRXP46100 2492 aa8.38□□□□□ -1.07
NECAP1-212ENST00000638787 NUP210LQ5VU65 1888 aa8.38□□□□□ -1.07
NECAP1-212ENST00000638787 IDSB3KWA1 339 aa8.38□□□□□ -1.07
NECAP1-212ENST00000638787 FOXE1O00358 373 aaPredicted RBP8.38□□□□□ -1.07
NECAP1-212ENST00000638787 TRIM13O60858 407 aa8.38□□□□□ -1.07
NECAP1-212ENST00000638787 JRKO75564 520 aa8.38□□□□□ -1.07
NECAP1-212ENST00000638787 BMP10O95393 424 aa8.38□□□□□ -1.07
NECAP1-212ENST00000638787 ITGB2P05107 769 aa8.38□□□□□ -1.07
NECAP1-212ENST00000638787 ALDH3A1P30838 453 aa8.38□□□□□ -1.07
NECAP1-212ENST00000638787 ETV4P43268 484 aa8.38□□□□□ -1.07
NECAP1-212ENST00000638787 CCR10P46092 362 aa8.38□□□□□ -1.07
NECAP1-212ENST00000638787 ASPHQ12797 758 aa8.38□□□□□ -1.07
NECAP1-212ENST00000638787 ATP1A4Q13733 1029 aa8.38□□□□□ -1.07
NECAP1-212ENST00000638787 C10orf62Q5T681 223 aaPredicted RBP8.38□□□□□ -1.07
NECAP1-212ENST00000638787 DEPDC1Q5TB30 811 aa8.38□□□□□ -1.07
NECAP1-212ENST00000638787 BORAQ6PGQ7 559 aa8.38□□□□□ -1.07
NECAP1-212ENST00000638787 PPP1R32Q7Z5V6 425 aa8.38□□□□□ -1.07
NECAP1-212ENST00000638787 UBE3DQ7Z6J8 389 aa8.38□□□□□ -1.07
NECAP1-212ENST00000638787 LAPTM4BQ86VI4 370 aa8.38□□□□□ -1.07
NECAP1-212ENST00000638787 CDYL2Q8N8U2 506 aa8.38□□□□□ -1.07
NECAP1-212ENST00000638787 SRFBP1Q8NEF9 429 aaKnown RBP8.38□□□□□ -1.07
NECAP1-212ENST00000638787 AGAP11Q8TF27 550 aa8.38□□□□□ -1.07
NECAP1-212ENST00000638787 EXTL1Q92935 676 aa8.38□□□□□ -1.07
NECAP1-212ENST00000638787 MTFMTQ96DP5 389 aaKnown RBP8.38□□□□□ -1.07
NECAP1-212ENST00000638787 PEX11GQ96HA9 241 aa8.38□□□□□ -1.07
NECAP1-212ENST00000638787 KCNC2Q96PR1 638 aa8.38□□□□□ -1.07
NECAP1-212ENST00000638787 CENPKQ9BS16 269 aa8.38□□□□□ -1.07
NECAP1-212ENST00000638787 GATA5Q9BWX5 397 aaPredicted RBP8.38□□□□□ -1.07
NECAP1-212ENST00000638787 RBCK1Q9BYM8 510 aa8.38□□□□□ -1.07
NECAP1-212ENST00000638787 SLC29A3Q9BZD2 475 aa8.38□□□□□ -1.07
NECAP1-212ENST00000638787 ELOVL6Q9H5J4 265 aa8.38□□□□□ -1.07
NECAP1-212ENST00000638787 COPS7BQ9H9Q2 264 aaPredicted RBP8.38□□□□□ -1.07
NECAP1-212ENST00000638787 CLK4Q9HAZ1 481 aaKnown RBP8.38□□□□□ -1.07
NECAP1-212ENST00000638787 TMBIM4Q9HC24 238 aa8.38□□□□□ -1.07
NECAP1-212ENST00000638787 MID1IP1Q9NPA3 183 aa8.38□□□□□ -1.07
NECAP1-212ENST00000638787 SEMA3GQ9NS98 782 aa8.38□□□□□ -1.07
NECAP1-212ENST00000638787 PPT2Q9UMR5 302 aa8.38□□□□□ -1.07
NECAP1-212ENST00000638787 SNX6Q9UNH7 406 aa8.38□□□□□ -1.07
NECAP1-212ENST00000638787 PCSK5Q92824 1860 aa8.37□□□□□ -1.07
NECAP1-212ENST00000638787 SCN2AQ99250 2005 aa8.37□□□□□ -1.07
NECAP1-212ENST00000638787 SAP18O00422 153 aaKnown RBP8.37□□□□□ -1.07
NECAP1-212ENST00000638787 RTCAO00442 366 aaKnown RBP8.37□□□□□ -1.07
NECAP1-212ENST00000638787 SOCS6O14544 535 aa8.37□□□□□ -1.07
NECAP1-212ENST00000638787 UBFD1O14562 309 aaKnown RBP8.37□□□□□ -1.07
NECAP1-212ENST00000638787 B3GALT2O43825 422 aa8.37□□□□□ -1.07
NECAP1-212ENST00000638787 ETHE1O95571 254 aa8.37□□□□□ -1.07
NECAP1-212ENST00000638787 IGHEP01854 428 aa8.37□□□□□ -1.07
NECAP1-212ENST00000638787 ENO1P06733 434 aaKnown RBP8.37□□□□□ -1.07
NECAP1-212ENST00000638787 HEXBP07686 556 aa8.37□□□□□ -1.07
NECAP1-212ENST00000638787 RNH1P13489 461 aaKnown RBP8.37□□□□□ -1.07
NECAP1-212ENST00000638787 IL10P22301 178 aa8.37□□□□□ -1.07
NECAP1-212ENST00000638787 MMP11P24347 488 aa8.37□□□□□ -1.07
NECAP1-212ENST00000638787 PTX3P26022 381 aaPredicted RBP8.37□□□□□ -1.07
NECAP1-212ENST00000638787 CERS1P27544 350 aa8.37□□□□□ -1.07
NECAP1-212ENST00000638787 HMOX2P30519 316 aa8.37□□□□□ -1.07
NECAP1-212ENST00000638787 SSR2P43308 183 aa8.37□□□□□ -1.07
NECAP1-212ENST00000638787 RAP1GDS1P52306 607 aa8.37□□□□□ -1.07
NECAP1-212ENST00000638787 EFNA3P52797 238 aa8.37□□□□□ -1.07
NECAP1-212ENST00000638787 EMP2P54851 167 aa8.37□□□□□ -1.07
NECAP1-212ENST00000638787 RUNX2Q13950 521 aa8.37□□□□□ -1.07
NECAP1-212ENST00000638787 MINDY4Q4G0A6 757 aa8.37□□□□□ -1.07
NECAP1-212ENST00000638787 SGO1Q5FBB7 561 aa8.37□□□□□ -1.07
NECAP1-212ENST00000638787 MFSD4BQ5TF39 518 aa8.37□□□□□ -1.07
NECAP1-212ENST00000638787 HDXQ7Z353 690 aa8.37□□□□□ -1.07
NECAP1-212ENST00000638787 CA13Q8N1Q1 262 aa8.37□□□□□ -1.07
NECAP1-212ENST00000638787 TTC9Q92623 222 aa8.37□□□□□ -1.07
NECAP1-212ENST00000638787 RGMAQ96B86 450 aa8.37□□□□□ -1.07
NECAP1-212ENST00000638787 NACC2Q96BF6 587 aa8.37□□□□□ -1.07
NECAP1-212ENST00000638787 IP6K3Q96PC2 410 aa8.37□□□□□ -1.07
NECAP1-212ENST00000638787 OR1F2PQ96R84 312 aa8.37□□□□□ -1.07
NECAP1-212ENST00000638787 SERINC2Q96SA4 455 aa8.37□□□□□ -1.07
NECAP1-212ENST00000638787 TBCDQ9BTW9 1192 aa8.37□□□□□ -1.07
NECAP1-212ENST00000638787 NPLQ9BXD5 320 aaPredicted RBP8.37□□□□□ -1.07
NECAP1-212ENST00000638787 ROGDIQ9GZN7 287 aa8.37□□□□□ -1.07
NECAP1-212ENST00000638787 VN1R1Q9GZP7 353 aa8.37□□□□□ -1.07
NECAP1-212ENST00000638787 KCNK9Q9NPC2 374 aa8.37□□□□□ -1.07
NECAP1-212ENST00000638787 PRDM7Q9NQW5 492 aa8.37□□□□□ -1.07
NECAP1-212ENST00000638787 FARSBQ9NSD9 589 aaKnown RBP8.37□□□□□ -1.07
NECAP1-212ENST00000638787 PSD3Q9NYI0 1048 aa8.37□□□□□ -1.07
NECAP1-212ENST00000638787 MKL2Q9ULH7 1088 aa8.37□□□□□ -1.07
NECAP1-212ENST00000638787 KCNMB2Q9Y691 235 aa8.37□□□□□ -1.07
NECAP1-212ENST00000638787 TLN1Q9Y490 2541 aaKnown RBP8.37□□□□□ -1.07
NECAP1-212ENST00000638787 MED13Q9UHV7 2174 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms