RNA–Protein interactions for RNA: ENST00000636410.1

CHD2-224, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-224ENST00000636410 NUDT13Q86X67 352 aa5.04□□□□□ -1.6
CHD2-224ENST00000636410 TRIM42Q8IWZ5 723 aa5.04□□□□□ -1.6
CHD2-224ENST00000636410 KIRREL3Q8IZU9 778 aa5.04□□□□□ -1.6
CHD2-224ENST00000636410 GBP7Q8N8V2 638 aaPredicted RBP5.04□□□□□ -1.6
CHD2-224ENST00000636410 ADAMTS18Q8TE60 1221 aa5.04□□□□□ -1.6
CHD2-224ENST00000636410 STARD8Q92502 1023 aa5.04□□□□□ -1.6
CHD2-224ENST00000636410 RGMAQ96B86 450 aa5.04□□□□□ -1.6
CHD2-224ENST00000636410 MTFMTQ96DP5 389 aaKnown RBP5.04□□□□□ -1.6
CHD2-224ENST00000636410 SLC45A3Q96JT2 553 aa5.04□□□□□ -1.6
CHD2-224ENST00000636410 CNTNAP3BQ96NU0 1288 aa5.04□□□□□ -1.6
CHD2-224ENST00000636410 QRFPRQ96P65 431 aa5.04□□□□□ -1.6
CHD2-224ENST00000636410 OR1F2PQ96R84 312 aa5.04□□□□□ -1.6
CHD2-224ENST00000636410 F2RL3Q96RI0 385 aa5.04□□□□□ -1.6
CHD2-224ENST00000636410 CCNL2Q96S94 520 aaPredicted RBP5.04□□□□□ -1.6
CHD2-224ENST00000636410 SERINC2Q96SA4 455 aa5.04□□□□□ -1.6
CHD2-224ENST00000636410 SERPINI1Q99574 410 aa5.04□□□□□ -1.6
CHD2-224ENST00000636410 SPSB2Q99619 263 aa5.04□□□□□ -1.6
CHD2-224ENST00000636410 TBCDQ9BTW9 1192 aa5.04□□□□□ -1.6
CHD2-224ENST00000636410 NPLQ9BXD5 320 aaPredicted RBP5.04□□□□□ -1.6
CHD2-224ENST00000636410 CNTNAP3Q9BZ76 1288 aa5.04□□□□□ -1.6
CHD2-224ENST00000636410 ACPTQ9BZG2 426 aa5.04□□□□□ -1.6
CHD2-224ENST00000636410 SHCBP1LQ9BZQ2 653 aa5.04□□□□□ -1.6
CHD2-224ENST00000636410 TGIF2Q9GZN2 237 aa5.04□□□□□ -1.6
CHD2-224ENST00000636410 OR51B5Q9H339 312 aa5.04□□□□□ -1.6
CHD2-224ENST00000636410 ACTL8Q9H568 366 aa5.04□□□□□ -1.6
CHD2-224ENST00000636410 TNFRSF12AQ9NP84 129 aa5.04□□□□□ -1.6
CHD2-224ENST00000636410 MKKSQ9NPJ1 570 aaPredicted RBP5.04□□□□□ -1.6
CHD2-224ENST00000636410 MED4Q9NPJ6 270 aa5.04□□□□□ -1.6
CHD2-224ENST00000636410 PRDM7Q9NQW5 492 aa5.04□□□□□ -1.6
CHD2-224ENST00000636410 FARSBQ9NSD9 589 aaKnown RBP5.04□□□□□ -1.6
CHD2-224ENST00000636410 NMRK1Q9NWW6 199 aa5.04□□□□□ -1.6
CHD2-224ENST00000636410 HCN3Q9P1Z3 774 aa5.04□□□□□ -1.6
CHD2-224ENST00000636410 TRPC4Q9UBN4 977 aa5.04□□□□□ -1.6
CHD2-224ENST00000636410 CTSFQ9UBX1 484 aa5.04□□□□□ -1.6
CHD2-224ENST00000636410 ZNF282Q9UDV7 671 aaPredicted RBP5.04□□□□□ -1.6
CHD2-224ENST00000636410 NXT1Q9UKK6 140 aaKnown RBP5.04□□□□□ -1.6
CHD2-224ENST00000636410 TCFL5Q9UL49 500 aa5.04□□□□□ -1.6
CHD2-224ENST00000636410 ZMIZ1Q9ULJ6 1067 aa5.04□□□□□ -1.6
CHD2-224ENST00000636410 SLC12A4Q9UP95 1085 aa5.04□□□□□ -1.6
CHD2-224ENST00000636410 FARSAQ9Y285 508 aaKnown RBP5.04□□□□□ -1.6
CHD2-224ENST00000636410 FIS1Q9Y3D6 152 aa5.04□□□□□ -1.6
CHD2-224ENST00000636410 TIMM22Q9Y584 194 aa5.04□□□□□ -1.6
CHD2-224ENST00000636410 MAU2Q9Y6X3 613 aa5.04□□□□□ -1.6
CHD2-224ENST00000636410 ASPMQ8IZT6 3477 aa5.04□□□□□ -1.6
CHD2-224ENST00000636410 A0A0A6YYD5 115 aa5.03□□□□□ -1.6
CHD2-224ENST00000636410 A0A0G2JN53 185 aa5.03□□□□□ -1.6
CHD2-224ENST00000636410 ZNF860A6NHJ4 632 aa5.03□□□□□ -1.6
CHD2-224ENST00000636410 VSTM2BA6NLU5 285 aa5.03□□□□□ -1.6
CHD2-224ENST00000636410 SRRM3A6NNA2 597 aaPredicted RBP5.03□□□□□ -1.6
CHD2-224ENST00000636410 ZNF891A8MT65 544 aaPredicted RBP5.03□□□□□ -1.6
CHD2-224ENST00000636410 TMEM233B4DJY2 109 aa5.03□□□□□ -1.6
CHD2-224ENST00000636410 SAP18O00422 153 aaKnown RBP5.03□□□□□ -1.6
CHD2-224ENST00000636410 RTCAO00442 366 aaKnown RBP5.03□□□□□ -1.6
CHD2-224ENST00000636410 CHST10O43529 356 aa5.03□□□□□ -1.6
CHD2-224ENST00000636410 ITM2AO43736 263 aa5.03□□□□□ -1.6
CHD2-224ENST00000636410 CNOT3O75175 753 aaKnown RBP5.03□□□□□ -1.6
CHD2-224ENST00000636410 SNNO75324 88 aaPredicted RBP5.03□□□□□ -1.6
CHD2-224ENST00000636410 SH3BGRLO75368 114 aa5.03□□□□□ -1.6
CHD2-224ENST00000636410 CREG1O75629 220 aa5.03□□□□□ -1.6
CHD2-224ENST00000636410 KLF7O75840 302 aaPredicted RBP5.03□□□□□ -1.6
CHD2-224ENST00000636410 RSL1D1O76021 490 aaKnown RBP5.03□□□□□ -1.6
CHD2-224ENST00000636410 RECKO95980 971 aa5.03□□□□□ -1.6
CHD2-224ENST00000636410 CYC1P08574 325 aa5.03□□□□□ -1.6
CHD2-224ENST00000636410 ZGLP1P0C6A0 271 aa5.03□□□□□ -1.6
CHD2-224ENST00000636410 ATXN8OSP0DMR3 200 aa5.03□□□□□ -1.6
CHD2-224ENST00000636410 RNH1P13489 461 aaKnown RBP5.03□□□□□ -1.6
CHD2-224ENST00000636410 CHN1P15882 459 aa5.03□□□□□ -1.6
CHD2-224ENST00000636410 WT1P19544 449 aaPredicted RBP5.03□□□□□ -1.6
CHD2-224ENST00000636410 IL10P22301 178 aa5.03□□□□□ -1.6
CHD2-224ENST00000636410 HIST1H1TP22492 207 aaPredicted RBP5.03□□□□□ -1.6
CHD2-224ENST00000636410 JAK1P23458 1154 aa5.03□□□□□ -1.6
CHD2-224ENST00000636410 ATP5A1P25705 553 aaKnown RBP5.03□□□□□ -1.6
CHD2-224ENST00000636410 ITPKBP27987 946 aa5.03□□□□□ -1.6
CHD2-224ENST00000636410 SERPINB3P29508 390 aa5.03□□□□□ -1.6
CHD2-224ENST00000636410 BSGP35613 385 aa5.03□□□□□ -1.6
CHD2-224ENST00000636410 XCR1P46094 333 aa5.03□□□□□ -1.6
CHD2-224ENST00000636410 SLC1A6P48664 564 aa5.03□□□□□ -1.6
CHD2-224ENST00000636410 LIM2P55344 173 aa5.03□□□□□ -1.6
CHD2-224ENST00000636410 RAB38P57729 211 aa5.03□□□□□ -1.6
CHD2-224ENST00000636410 RPS18P62269 152 aaKnown RBP5.03□□□□□ -1.6
CHD2-224ENST00000636410 OLR1P78380 273 aa5.03□□□□□ -1.6
CHD2-224ENST00000636410 BTN3A2P78410 334 aa5.03□□□□□ -1.6
CHD2-224ENST00000636410 MAT1AQ00266 395 aaKnown RBP5.03□□□□□ -1.6
CHD2-224ENST00000636410 MC1RQ01726 317 aa5.03□□□□□ -1.6
CHD2-224ENST00000636410 KLC1Q07866 573 aa5.03□□□□□ -1.6
CHD2-224ENST00000636410 BST1Q10588 318 aa5.03□□□□□ -1.6
CHD2-224ENST00000636410 SRSF6Q13247 344 aaKnown RBP5.03□□□□□ -1.6
CHD2-224ENST00000636410 ABRAXAS2Q15018 415 aa5.03□□□□□ -1.6
CHD2-224ENST00000636410 UGT8Q16880 541 aa5.03□□□□□ -1.6
CHD2-224ENST00000636410 IMPG1Q17R60 797 aa5.03□□□□□ -1.6
CHD2-224ENST00000636410 AP5B1Q2VPB7 878 aa5.03□□□□□ -1.6
CHD2-224ENST00000636410 CRTC2Q53ET0 693 aaPredicted RBP5.03□□□□□ -1.6
CHD2-224ENST00000636410 SPIN4Q56A73 249 aa5.03□□□□□ -1.6
CHD2-224ENST00000636410 VWA2Q5GFL6 755 aa5.03□□□□□ -1.6
CHD2-224ENST00000636410 CES4AQ5XG92 561 aa5.03□□□□□ -1.6
CHD2-224ENST00000636410 FAM219BQ5XKK7 198 aa5.03□□□□□ -1.6
CHD2-224ENST00000636410 ATG16L1Q676U5 607 aa5.03□□□□□ -1.6
CHD2-224ENST00000636410 OR4C11Q6IEV9 310 aa5.03□□□□□ -1.6
CHD2-224ENST00000636410 ZNF793Q6ZN11 406 aa5.03□□□□□ -1.6
CHD2-224ENST00000636410 CCDC81Q6ZN84 652 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms