RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 POLR2CP19387 275 aaPredicted RBP2.8□□□□□ -1.96
PSPC1-208ENST00000635562 KLRC2P26717 231 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 GIFP27352 417 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 EPHB2P29323 1055 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 SLC1A3P43003 542 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 RPS5P46782 204 aaKnown RBP2.8□□□□□ -1.96
PSPC1-208ENST00000635562 SLC6A12P48065 614 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 FHITP49789 147 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 CNN1P51911 297 aaKnown RBP2.8□□□□□ -1.96
PSPC1-208ENST00000635562 CCNG1P51959 295 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 HNRNPFP52597 415 aaKnown RBP2.8□□□□□ -1.96
PSPC1-208ENST00000635562 HNRNPKP61978 463 aaKnown RBP eCLIP2.8□□□□□ -1.96
PSPC1-208ENST00000635562 CSNK1G2P78368 415 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 LRRC63Q05C16 580 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 GOLGA8FQ08AF8 430 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 ACSM1Q08AH1 577 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 CDC20Q12834 499 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 DMP1Q13316 513 aaPredicted RBP2.8□□□□□ -1.96
PSPC1-208ENST00000635562 GCKRQ14397 625 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 PIGHQ14442 188 aaPredicted RBP2.8□□□□□ -1.96
PSPC1-208ENST00000635562 MAPK11Q15759 364 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 SNAPC1Q16533 368 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 ANKRD55Q3KP44 614 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 ZSCAN23Q3MJ62 389 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 IQCCQ4KMZ1 466 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 XKR4Q5GH76 650 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 BEX5Q5H9J7 111 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 WSCD1Q658N2 575 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 METTL2BQ6P1Q9 378 aaKnown RBP2.8□□□□□ -1.96
PSPC1-208ENST00000635562 FAM171BQ6P995 826 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 CYB5D1Q6P9G0 228 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 TSSK4Q6SA08 328 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 ZNF517Q6ZMY9 492 aaPredicted RBP2.8□□□□□ -1.96
PSPC1-208ENST00000635562 FAM57BQ71RH2 274 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 UTS2BQ765I0 119 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 NELFCDQ8IXH7 590 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 C4orf19Q8IY42 314 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 FAM58AQ8N1B3 248 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 CCNYL1Q8N7R7 359 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 SNX31Q8N9S9 440 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 GPRC5AQ8NFJ5 357 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 RDM1Q8NG50 284 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 OR5T1Q8NG75 326 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 OR13F1Q8NGS4 319 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 SPATA3Q8NHX4 192 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 LRRC20Q8TCA0 184 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 DQX1Q8TE96 717 aaKnown RBP2.8□□□□□ -1.96
PSPC1-208ENST00000635562 HEXDCQ8WVB3 486 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 CAPSLQ8WWF8 208 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 MRGPRFQ96AM1 343 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 ESAMQ96AP7 390 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 RAD51AP1Q96B01 352 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 SLCO4A1Q96BD0 722 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 ERLEC1Q96DZ1 483 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 ELMOD3Q96FG2 381 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 THOC3Q96J01 351 aaKnown RBP2.8□□□□□ -1.96
PSPC1-208ENST00000635562 SERAC1Q96JX3 654 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 ZNF514Q96K75 400 aaPredicted RBP2.8□□□□□ -1.96
PSPC1-208ENST00000635562 SENP8Q96LD8 212 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 ZNF48Q96MX3 618 aaPredicted RBP2.8□□□□□ -1.96
PSPC1-208ENST00000635562 TSNARE1Q96NA8 513 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 BTBD9Q96Q07 612 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 TEFMQ96QE5 360 aaKnown RBP2.8□□□□□ -1.96
PSPC1-208ENST00000635562 PANX3Q96QZ0 392 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 PANX1Q96RD7 426 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 CDRT15Q96T59 188 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 RIT2Q99578 217 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 CITED1Q99966 193 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 FAM110AQ9BQ89 295 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 MXRA8Q9BRK3 442 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 KATNB1Q9BVA0 655 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 IDI2Q9BXS1 227 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 ANGPTL4Q9BY76 406 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 DERL2Q9GZP9 239 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 MFFQ9GZY8 342 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 OR51V1Q9H2C8 321 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 FZD8Q9H461 694 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 PLK3Q9H4B4 646 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 METTL8Q9H825 291 aaKnown RBP2.8□□□□□ -1.96
PSPC1-208ENST00000635562 NOL11Q9H8H0 719 aaKnown RBP2.8□□□□□ -1.96
PSPC1-208ENST00000635562 MINDY3Q9H8M7 445 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 LMAN1LQ9HAT1 526 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 ZFP14Q9HCL3 533 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 SPAG4Q9NPE6 437 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 MRPL40Q9NQ50 206 aaKnown RBP2.8□□□□□ -1.96
PSPC1-208ENST00000635562 CHRAC1Q9NRG0 131 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 HIF1ANQ9NWT6 349 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 TMEM161AQ9NX61 479 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 ELOVL2Q9NXB9 296 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 MTMR10Q9NXD2 777 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 RBAKQ9NYW8 714 aaPredicted RBP2.8□□□□□ -1.96
PSPC1-208ENST00000635562 GRHL1Q9NZI5 618 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 NCKIPSDQ9NZQ3 722 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 DLGAP2Q9P1A6 1054 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 ABI3Q9P2A4 366 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 PSMC3IPQ9P2W1 217 aaPredicted RBP2.8□□□□□ -1.96
PSPC1-208ENST00000635562 NLKQ9UBE8 527 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 ENPP5Q9UJA9 477 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 VANGL2Q9ULK5 521 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 PLA2G4CQ9UP65 541 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms