RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 TBC1D19Q8N5T2 526 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 DPP10Q8N608 796 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 RNF148Q8N7C7 305 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 GPR156Q8NFN8 814 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 TTLQ8NG68 377 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 WDR48Q8TAF3 677 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 ZDHHC1Q8WTX9 485 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 RNF166Q96A37 237 aaPredicted RBP9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 HOPXQ9BPY8 73 aaPredicted RBP9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 MS4A8Q9BY19 250 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 DPH1Q9BZG8 443 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 SPAG4Q9NPE6 437 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 LHX9Q9NQ69 397 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 SLC6A13Q9NSD5 602 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 TMEM184CQ9NVA4 438 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 TMEM181Q9P2C4 612 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 ABCD2Q9UBJ2 740 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 CD300AQ9UGN4 299 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 DOLKQ9UPQ8 538 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 ERVK-11Q9UQG0 969 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 POMPQ9Y244 141 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 KLHL20Q9Y2M5 609 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 PRORSD1PA6NEY8 169 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 C4orf51C9J302 202 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 TRIM38O00635 465 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 NME4O00746 187 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 PLPP1O14494 284 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 HAT1O14929 419 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 YY2O15391 372 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 OR1F1O43749 312 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 DXOO77932 396 aaKnown RBP9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 GBAP04062 536 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 IL6P05231 212 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 HOXB9P17482 250 aaPredicted RBP9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 PRPS1L1P21108 318 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 BCL6P41182 706 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 LSSP48449 732 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 TMPRSS3P57727 454 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 C21orf58P58505 322 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 ACTR3P61158 418 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 HNRNPKP61978 463 aaKnown RBP eCLIP9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 MS4A2Q01362 244 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 CFHR1Q03591 330 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 FOXM1Q08050 763 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 HYAL2Q12891 473 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 NFYCQ13952 458 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 KIR2DS3Q14952 304 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 UGT8Q16880 541 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 TRMT5Q32P41 509 aaKnown RBP9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 PRMT9Q6P2P2 845 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 COMMD6Q7Z4G1 85 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 SPACA3Q8IXA5 215 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 RBM12BQ8IXT5 1001 aaKnown RBP9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 METTL4Q8N3J2 472 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 FAM181AQ8N9Y4 354 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 FAM156AQ8NDB6 213 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 CREB3L4Q8TEY5 395 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 GTF2H4Q92759 462 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 TESCQ96BS2 214 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 CCDC124Q96CT7 223 aaKnown RBP9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 LRRC58Q96CX6 371 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 OR2A14Q96R47 310 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 DPH7Q9BTV6 452 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 SARGQ9BW04 601 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 SORBS1Q9BX66 1292 aaKnown RBP9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 IL1RL2Q9HB29 575 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 SERHLQ9NQF3 203 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 NLGN3Q9NZ94 848 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 AHSPQ9NZD4 102 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 ADA2Q9NZK5 511 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 SPASTQ9UBP0 616 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 PCDHA9Q9Y5H5 950 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 LAMA5O15230 3695 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 SCN3AQ9NY46 2000 aa9.05□□□□□ -0.96
PDLIM5-223ENST00000627587 GNG14A0A1W2PPG7 69 aa9.05□□□□□ -0.96
PDLIM5-223ENST00000627587 TRBC2A0A5B9 178 aa9.05□□□□□ -0.96
PDLIM5-223ENST00000627587 B4DGG1 531 aa9.05□□□□□ -0.96
PDLIM5-223ENST00000627587 PPM1DO15297 605 aa9.05□□□□□ -0.96
PDLIM5-223ENST00000627587 PCDH7O60245 1069 aa9.05□□□□□ -0.96
PDLIM5-223ENST00000627587 PRMT3O60678 531 aa9.05□□□□□ -0.96
PDLIM5-223ENST00000627587 SCN2BO60939 215 aa9.05□□□□□ -0.96
PDLIM5-223ENST00000627587 C1QL1O75973 258 aa9.05□□□□□ -0.96
PDLIM5-223ENST00000627587 LRATO95237 230 aa9.05□□□□□ -0.96
PDLIM5-223ENST00000627587 NPPAP01160 153 aa9.05□□□□□ -0.96
PDLIM5-223ENST00000627587 PGRP06401 933 aa9.05□□□□□ -0.96
PDLIM5-223ENST00000627587 ANXA4P09525 319 aaPredicted RBP9.05□□□□□ -0.96
PDLIM5-223ENST00000627587 PTPN6P29350 595 aa9.05□□□□□ -0.96
PDLIM5-223ENST00000627587 TIA1P31483 386 aaKnown RBP eCLIP9.05□□□□□ -0.964e-7■■■■■ 27.1
PDLIM5-223ENST00000627587 HNRNPH1P31943 449 aaKnown RBP9.05□□□□□ -0.96
PDLIM5-223ENST00000627587 ASMTP46597 345 aa9.05□□□□□ -0.96
PDLIM5-223ENST00000627587 ERFP50548 548 aa9.05□□□□□ -0.96
PDLIM5-223ENST00000627587 WNT3P56703 355 aa9.05□□□□□ -0.96
PDLIM5-223ENST00000627587 CLDN6P56747 220 aa9.05□□□□□ -0.96
PDLIM5-223ENST00000627587 SNRPNP63162 240 aaKnown RBP9.05□□□□□ -0.96
PDLIM5-223ENST00000627587 CXADRP78310 365 aa9.05□□□□□ -0.96
PDLIM5-223ENST00000627587 CYP4F2P78329 520 aa9.05□□□□□ -0.96
PDLIM5-223ENST00000627587 HHEXQ03014 270 aa9.05□□□□□ -0.96
PDLIM5-223ENST00000627587 CCNIQ14094 377 aa9.05□□□□□ -0.96
PDLIM5-223ENST00000627587 DPY19L1Q2PZI1 675 aa9.05□□□□□ -0.96
PDLIM5-223ENST00000627587 IGF2-ASQ6U949 168 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms