RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 CEACAM7Q14002 265 aa7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 CAPRIN1Q14444 709 aaKnown RBP7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 SLC9A5Q14940 896 aa7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 KPNB1Q14974 876 aaKnown RBP7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 SUZ12Q15022 739 aaKnown RBP7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 NR0B2Q15466 257 aa7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 HLA-BQ31612 363 aa7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 C6orf10Q5SRN2 563 aa7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 LRIF1Q5T3J3 769 aa7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 OR4F3Q6IEY1 312 aa7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 NANOGP8Q6NSW7 305 aa7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 IRGCQ6NXR0 463 aa7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 ABHD17CQ6PCB6 329 aa7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 SLC23A3Q6PIS1 610 aa7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 DLEU7Q6UYE1 221 aa7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 RIPOR1Q6ZS17 1223 aa7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 ABHD13Q7L211 337 aa7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 ASCL5Q7RTU5 278 aa7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 KANSL1Q7Z3B3 1105 aa7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 VN1R4Q7Z5H5 301 aa7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 UBE3DQ7Z6J8 389 aa7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 HPS6Q86YV9 775 aa7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 SLC35F3Q8IY50 421 aa7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 OR4C6Q8NH72 309 aa7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 DNAJB14Q8TBM8 379 aa7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 SAP25Q8TEE9 199 aa7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 STMN2Q93045 179 aa7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 TMEM125Q96AQ2 219 aa7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 PPCDCQ96CD2 204 aa7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 TCTN2Q96GX1 697 aa7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 ZNF764Q96H86 408 aaPredicted RBP7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 LOXL4Q96JB6 756 aa7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 CCDC115Q96NT0 180 aa7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 GBP5Q96PP8 586 aa7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 TRAPPC9Q96Q05 1148 aa7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 CGREF1Q99674 301 aa7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 C17orf62Q9BQA9 187 aa7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 CCDC3Q9BQI4 270 aa7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 DUSP26Q9BV47 211 aa7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 FAIM2Q9BWQ8 316 aa7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 ZNF717Q9BY31 904 aaPredicted RBP7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 CHRNA10Q9GZZ6 450 aa7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 MUC13Q9H3R2 512 aa7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 DENND2DQ9H6A0 471 aaPredicted RBP7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 COPS7BQ9H9Q2 264 aaPredicted RBP7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 NANOGQ9H9S0 305 aa7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 CAPN10Q9HC96 672 aa7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 LHX9Q9NQ69 397 aa7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 MIEF1Q9NQG6 463 aa7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 DNAAF2Q9NVR5 837 aaKnown RBP7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 LYARQ9NX58 379 aaKnown RBP7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 CD300AQ9UGN4 299 aa7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 BTNL2Q9UIR0 455 aa7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 PADI4Q9UM07 663 aa7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 SLC6A14Q9UN76 642 aa7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 PCDHA9Q9Y5H5 950 aa7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 DOCK9Q9BZ29 2069 aa7.18□□□□□ -1.26
PTP4A1-206ENST00000627002 IGHV1OR21-1A0A087WYE8 117 aa7.17□□□□□ -1.26
PTP4A1-206ENST00000627002 A0A0J9YVX5 310 aa7.17□□□□□ -1.26
PTP4A1-206ENST00000627002 PRORSD1PA6NEY8 169 aa7.17□□□□□ -1.26
PTP4A1-206ENST00000627002 A8MUI8 341 aa7.17□□□□□ -1.26
PTP4A1-206ENST00000627002 H0YGG7 62 aa7.17□□□□□ -1.26
PTP4A1-206ENST00000627002 RTCAO00442 366 aaKnown RBP7.17□□□□□ -1.26
PTP4A1-206ENST00000627002 RNASET2O00584 256 aaKnown RBP7.17□□□□□ -1.26
PTP4A1-206ENST00000627002 SRPX2O60687 465 aaPredicted RBP7.17□□□□□ -1.26
PTP4A1-206ENST00000627002 KLHL18O94889 574 aa7.17□□□□□ -1.26
PTP4A1-206ENST00000627002 SCELO95171 688 aa7.17□□□□□ -1.26
PTP4A1-206ENST00000627002 ANP32DO95626 131 aa7.17□□□□□ -1.26
PTP4A1-206ENST00000627002 ATP6V1G2O95670 118 aa7.17□□□□□ -1.26
PTP4A1-206ENST00000627002 IL3P08700 152 aa7.17□□□□□ -1.26
PTP4A1-206ENST00000627002 FAM58BPP0C7Q3 252 aa7.17□□□□□ -1.26
PTP4A1-206ENST00000627002 ZCCHC18P0CG32 403 aa7.17□□□□□ -1.26
PTP4A1-206ENST00000627002 ZNF888P0CJ79 500 aaPredicted RBP7.17□□□□□ -1.26
PTP4A1-206ENST00000627002 GIMD1P0DJR0 217 aa7.17□□□□□ -1.26
PTP4A1-206ENST00000627002 LAMP1P11279 417 aa7.17□□□□□ -1.26
PTP4A1-206ENST00000627002 PVRP15151 417 aa7.17□□□□□ -1.26
PTP4A1-206ENST00000627002 ST6GAL1P15907 406 aa7.17□□□□□ -1.26
PTP4A1-206ENST00000627002 HIST1H1TP22492 207 aaPredicted RBP7.17□□□□□ -1.26
PTP4A1-206ENST00000627002 ATP5A1P25705 553 aaKnown RBP7.17□□□□□ -1.26
PTP4A1-206ENST00000627002 ALDH4A1P30038 563 aa7.17□□□□□ -1.26
PTP4A1-206ENST00000627002 MLLT3P42568 568 aaPredicted RBP7.17□□□□□ -1.26
PTP4A1-206ENST00000627002 ARF3P61204 181 aaPredicted RBP7.17□□□□□ -1.26
PTP4A1-206ENST00000627002 PPP1CAP62136 330 aa7.17□□□□□ -1.26
PTP4A1-206ENST00000627002 PHC1P78364 1004 aa7.17□□□□□ -1.26
PTP4A1-206ENST00000627002 BTN3A2P78410 334 aa7.17□□□□□ -1.26
PTP4A1-206ENST00000627002 BNIP2Q12982 314 aa7.17□□□□□ -1.26
PTP4A1-206ENST00000627002 RUNDC3AQ59EK9 446 aa7.17□□□□□ -1.26
PTP4A1-206ENST00000627002 TRIM61Q5EBN2 209 aa7.17□□□□□ -1.26
PTP4A1-206ENST00000627002 FBXW10Q5XX13 1052 aa7.17□□□□□ -1.26
PTP4A1-206ENST00000627002 MRM1Q6IN84 353 aaKnown RBP7.17□□□□□ -1.26
PTP4A1-206ENST00000627002 PLXDC1Q8IUK5 500 aa7.17□□□□□ -1.26
PTP4A1-206ENST00000627002 SLC15A3Q8IY34 581 aa7.17□□□□□ -1.26
PTP4A1-206ENST00000627002 ACOT4Q8N9L9 421 aa7.17□□□□□ -1.26
PTP4A1-206ENST00000627002 FAM181AQ8N9Y4 354 aa7.17□□□□□ -1.26
PTP4A1-206ENST00000627002 NUDT8Q8WV74 236 aa7.17□□□□□ -1.26
PTP4A1-206ENST00000627002 WDR60Q8WVS4 1066 aa7.17□□□□□ -1.26
PTP4A1-206ENST00000627002 NCSTNQ92542 709 aa7.17□□□□□ -1.26
PTP4A1-206ENST00000627002 TM4SF18Q96CE8 201 aa7.17□□□□□ -1.26
PTP4A1-206ENST00000627002 CCDC124Q96CT7 223 aaKnown RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms