RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 CD1DP15813 335 aa2.63□□□□□ -1.99
VBP1-204ENST00000625964 KHKP50053 298 aa2.63□□□□□ -1.99
VBP1-204ENST00000625964 TSPY1Q01534 308 aa2.63□□□□□ -1.99
VBP1-204ENST00000625964 MAPK11Q15759 364 aa2.63□□□□□ -1.99
VBP1-204ENST00000625964 CDO1Q16878 200 aa2.63□□□□□ -1.99
VBP1-204ENST00000625964 C15orf32Q32M92 178 aa2.63□□□□□ -1.99
VBP1-204ENST00000625964 FAM182AQ5T1J6 154 aa2.63□□□□□ -1.99
VBP1-204ENST00000625964 TCEAL6Q6IPX3 200 aa2.63□□□□□ -1.99
VBP1-204ENST00000625964 MCM10Q7L590 875 aa2.63□□□□□ -1.99
VBP1-204ENST00000625964 SPATA19Q7Z5L4 167 aa2.63□□□□□ -1.99
VBP1-204ENST00000625964 MEX3DQ86XN8 651 aaKnown RBP2.63□□□□□ -1.99
VBP1-204ENST00000625964 SNRNP27Q8WVK2 155 aaKnown RBP2.63□□□□□ -1.99
VBP1-204ENST00000625964 CUX2O14529 1486 aa2.62□□□□□ -1.99
VBP1-204ENST00000625964 TRAV34A0A0B4J273 112 aa2.62□□□□□ -1.99
VBP1-204ENST00000625964 C5orf52A6NGY3 159 aa2.62□□□□□ -1.99
VBP1-204ENST00000625964 PHF1O43189 567 aaPredicted RBP2.62□□□□□ -1.99
VBP1-204ENST00000625964 HSP90AA1P07900 732 aaKnown RBP2.62□□□□□ -1.99
VBP1-204ENST00000625964 TIA1P31483 386 aaKnown RBP eCLIP2.62□□□□□ -1.992e-6■■■■□ 24.8
VBP1-204ENST00000625964 FCGR2BP31994 310 aaPredicted RBP2.62□□□□□ -1.99
VBP1-204ENST00000625964 FCGR2CP31995 323 aa2.62□□□□□ -1.99
VBP1-204ENST00000625964 GP5P40197 560 aa2.62□□□□□ -1.99
VBP1-204ENST00000625964 SLC1A3P43003 542 aa2.62□□□□□ -1.99
VBP1-204ENST00000625964 ABCE1P61221 599 aaKnown RBP2.62□□□□□ -1.99
VBP1-204ENST00000625964 FOLH1Q04609 750 aa2.62□□□□□ -1.99
VBP1-204ENST00000625964 SIX1Q15475 284 aaPredicted RBP2.62□□□□□ -1.99
VBP1-204ENST00000625964 EIPR1Q53HC9 387 aa2.62□□□□□ -1.99
VBP1-204ENST00000625964 ZRANB3Q5FWF4 1079 aa2.62□□□□□ -1.99
VBP1-204ENST00000625964 ARMCX4Q5H9R4 360 aa2.62□□□□□ -1.99
VBP1-204ENST00000625964 SEL1L3Q68CR1 1132 aa2.62□□□□□ -1.99
VBP1-204ENST00000625964 KLHL10Q6JEL2 608 aa2.62□□□□□ -1.99
VBP1-204ENST00000625964 CAVIN1Q6NZI2 390 aaKnown RBP2.62□□□□□ -1.99
VBP1-204ENST00000625964 SLC27A4Q6P1M0 643 aa2.62□□□□□ -1.99
VBP1-204ENST00000625964 C17orf107Q6ZR85 190 aa2.62□□□□□ -1.99
VBP1-204ENST00000625964 CREBRFQ8IUR6 639 aa2.62□□□□□ -1.99
VBP1-204ENST00000625964 FBXL16Q8N461 479 aa2.62□□□□□ -1.99
VBP1-204ENST00000625964 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.62□□□□□ -1.99
VBP1-204ENST00000625964 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.62□□□□□ -1.99
VBP1-204ENST00000625964 C11orf52Q96A22 123 aa2.62□□□□□ -1.99
VBP1-204ENST00000625964 STRADBQ9C0K7 418 aa2.62□□□□□ -1.99
VBP1-204ENST00000625964 MINDY3Q9H8M7 445 aa2.62□□□□□ -1.99
VBP1-204ENST00000625964 MOB1AQ9H8S9 216 aa2.62□□□□□ -1.99
VBP1-204ENST00000625964 MRGBPQ9NV56 204 aa2.62□□□□□ -1.99
VBP1-204ENST00000625964 GIMAP2Q9UG22 337 aa2.62□□□□□ -1.99
VBP1-204ENST00000625964 PCDHGA1Q9Y5H4 931 aa2.62□□□□□ -1.99
VBP1-204ENST00000625964 AUP1Q9Y679 476 aa2.62□□□□□ -1.99
VBP1-204ENST00000625964 POMT1Q9Y6A1 747 aa2.62□□□□□ -1.99
VBP1-204ENST00000625964 CC2D2AQ9P2K1 1620 aa2.61□□□□□ -1.99
VBP1-204ENST00000625964 IGLV3-10A0A075B6K4 115 aa2.61□□□□□ -1.99
VBP1-204ENST00000625964 TRGV8A0A0C4DH27 118 aa2.61□□□□□ -1.99
VBP1-204ENST00000625964 ZNF732B4DXR9 585 aa2.61□□□□□ -1.99
VBP1-204ENST00000625964 LMO7DNF2Z398 122 aa2.61□□□□□ -1.99
VBP1-204ENST00000625964 GPRIN2O60269 458 aa2.61□□□□□ -1.99
VBP1-204ENST00000625964 MELTFP08582 738 aa2.61□□□□□ -1.99
VBP1-204ENST00000625964 GP9P14770 177 aa2.61□□□□□ -1.99
VBP1-204ENST00000625964 BCL3P20749 454 aa2.61□□□□□ -1.99
VBP1-204ENST00000625964 LMO2P25791 158 aa2.61□□□□□ -1.99
VBP1-204ENST00000625964 SRD5A2P31213 254 aa2.61□□□□□ -1.99
VBP1-204ENST00000625964 RIDAP52758 137 aaKnown RBP2.61□□□□□ -1.99
VBP1-204ENST00000625964 EVCP57679 992 aa2.61□□□□□ -1.99
VBP1-204ENST00000625964 TFCP2Q12800 502 aa2.61□□□□□ -1.99
VBP1-204ENST00000625964 CNTN1Q12860 1018 aa2.61□□□□□ -1.99
VBP1-204ENST00000625964 ABRQ12979 859 aa2.61□□□□□ -1.99
VBP1-204ENST00000625964 KNOP1Q1ED39 458 aaKnown RBP2.61□□□□□ -1.99
VBP1-204ENST00000625964 ZNF770Q6IQ21 691 aaPredicted RBP2.61□□□□□ -1.99
VBP1-204ENST00000625964 Q6ZR54 194 aa2.61□□□□□ -1.99
VBP1-204ENST00000625964 CEACAM19Q7Z692 300 aa2.61□□□□□ -1.99
VBP1-204ENST00000625964 CARM1Q86X55 608 aa2.61□□□□□ -1.99
VBP1-204ENST00000625964 METTL23Q86XA0 190 aa2.61□□□□□ -1.99
VBP1-204ENST00000625964 C4orf19Q8IY42 314 aa2.61□□□□□ -1.99
VBP1-204ENST00000625964 C4orf32Q8N8J7 132 aa2.61□□□□□ -1.99
VBP1-204ENST00000625964 SMYD1Q8NB12 490 aa2.61□□□□□ -1.99
VBP1-204ENST00000625964 SUMF1Q8NBK3 374 aa2.61□□□□□ -1.99
VBP1-204ENST00000625964 OR4Q3Q8NH05 313 aa2.61□□□□□ -1.99
VBP1-204ENST00000625964 TAAR6Q96RI8 345 aa2.61□□□□□ -1.99
VBP1-204ENST00000625964 CCDC28BQ9BUN5 200 aa2.61□□□□□ -1.99
VBP1-204ENST00000625964 RBM24Q9BX46 236 aaKnown RBP2.61□□□□□ -1.99
VBP1-204ENST00000625964 LRRCC1Q9C099 1032 aa2.61□□□□□ -1.99
VBP1-204ENST00000625964 MTIF3Q9H2K0 278 aaKnown RBP2.61□□□□□ -1.99
VBP1-204ENST00000625964 FNDC4Q9H6D8 234 aaPredicted RBP2.61□□□□□ -1.99
VBP1-204ENST00000625964 PRR34Q9NV39 138 aa2.61□□□□□ -1.99
VBP1-204ENST00000625964 TSPAN16Q9UKR8 245 aa2.61□□□□□ -1.99
VBP1-204ENST00000625964 SPATA31D1Q6ZQQ2 1576 aa2.61□□□□□ -1.99
VBP1-204ENST00000625964 A0A0B4J203 849 aa2.6□□□□□ -1.99
VBP1-204ENST00000625964 C2orf92A0A1B0GVN3 265 aa2.6□□□□□ -1.99
VBP1-204ENST00000625964 ACSL4O60488 711 aa2.6□□□□□ -1.99
VBP1-204ENST00000625964 SELENOFO60613 162 aa2.6□□□□□ -1.99
VBP1-204ENST00000625964 RLN1P04808 185 aa2.6□□□□□ -1.99
VBP1-204ENST00000625964 ZFYP08048 801 aaPredicted RBP2.6□□□□□ -1.99
VBP1-204ENST00000625964 NPBWR1P48145 328 aa2.6□□□□□ -1.99
VBP1-204ENST00000625964 CRYBA2P53672 197 aa2.6□□□□□ -1.99
VBP1-204ENST00000625964 RPP38P78345 283 aaKnown RBP2.6□□□□□ -1.99
VBP1-204ENST00000625964 ACY1Q03154 408 aa2.6□□□□□ -1.99
VBP1-204ENST00000625964 CETN1Q12798 172 aa2.6□□□□□ -1.99
VBP1-204ENST00000625964 PSMD6Q15008 389 aa2.6□□□□□ -1.99
VBP1-204ENST00000625964 ECSCRQ19T08 205 aa2.6□□□□□ -1.99
VBP1-204ENST00000625964 TWISTNBQ3B726 338 aaPredicted RBP2.6□□□□□ -1.99
VBP1-204ENST00000625964 CASC4Q6P4E1 433 aa2.6□□□□□ -1.99
VBP1-204ENST00000625964 SHQ1Q6PI26 577 aaKnown RBP2.6□□□□□ -1.99
VBP1-204ENST00000625964 PET117Q6UWS5 81 aa2.6□□□□□ -1.99
VBP1-204ENST00000625964 FAM47EQ6ZV65 393 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms