RNA–Protein interactions for RNA: ENST00000625395.1

SEC23A-215, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 5 BASIC

Gene SEC23A, Length 261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-215ENST00000625395 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.37□□□□□ -1.87
SEC23A-215ENST00000625395 SF3B1O75533 1304 aaKnown RBP eCLIP3.37□□□□□ -1.87
SEC23A-215ENST00000625395 ZMYM6O95789 1325 aa3.37□□□□□ -1.87
SEC23A-215ENST00000625395 NBASA2RRP1 2371 aa3.37□□□□□ -1.87
SEC23A-215ENST00000625395 EML5Q05BV3 1969 aa3.36□□□□□ -1.87
SEC23A-215ENST00000625395 COL4A2P08572 1712 aa3.36□□□□□ -1.87
SEC23A-215ENST00000625395 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.36□□□□□ -1.87
SEC23A-215ENST00000625395 A0A087X0M5 115 aa3.36□□□□□ -1.87
SEC23A-215ENST00000625395 A0A1B0GX30 115 aa3.36□□□□□ -1.87
SEC23A-215ENST00000625395 KRTAP16-1A8MUX0 517 aa3.36□□□□□ -1.87
SEC23A-215ENST00000625395 KRTAP9-6A8MVA2 160 aa3.36□□□□□ -1.87
SEC23A-215ENST00000625395 CHMP2AO43633 222 aa3.36□□□□□ -1.87
SEC23A-215ENST00000625395 SYNCRIPO60506 623 aaKnown RBP3.36□□□□□ -1.87
SEC23A-215ENST00000625395 EDN1P05305 212 aa3.36□□□□□ -1.87
SEC23A-215ENST00000625395 OR4Q2P0C623 313 aa3.36□□□□□ -1.87
SEC23A-215ENST00000625395 MX1P20591 662 aa3.36□□□□□ -1.87
SEC23A-215ENST00000625395 OPRD1P41143 372 aa3.36□□□□□ -1.87
SEC23A-215ENST00000625395 PI4KAP42356 2102 aa3.36□□□□□ -1.87
SEC23A-215ENST00000625395 THOP1P52888 689 aa3.36□□□□□ -1.87
SEC23A-215ENST00000625395 ATXN3P54252 364 aaPredicted RBP3.36□□□□□ -1.87
SEC23A-215ENST00000625395 CD81P60033 236 aa3.36□□□□□ -1.87
SEC23A-215ENST00000625395 PTENP60484 403 aa3.36□□□□□ -1.87
SEC23A-215ENST00000625395 MPP1Q00013 466 aa3.36□□□□□ -1.87
SEC23A-215ENST00000625395 ZNF33AQ06730 810 aa3.36□□□□□ -1.87
SEC23A-215ENST00000625395 HNRNPDQ14103 355 aaKnown RBP3.36□□□□□ -1.87
SEC23A-215ENST00000625395 KARSQ15046 597 aaKnown RBP3.36□□□□□ -1.87
SEC23A-215ENST00000625395 MED22Q15528 200 aa3.36□□□□□ -1.87
SEC23A-215ENST00000625395 UPP1Q16831 310 aa3.36□□□□□ -1.87
SEC23A-215ENST00000625395 ASTE1Q2TB18 679 aaPredicted RBP3.36□□□□□ -1.87
SEC23A-215ENST00000625395 XKR3Q5GH77 459 aa3.36□□□□□ -1.87
SEC23A-215ENST00000625395 LYSMD4Q5XG99 296 aa3.36□□□□□ -1.87
SEC23A-215ENST00000625395 CWC27Q6UX04 472 aaKnown RBP3.36□□□□□ -1.87
SEC23A-215ENST00000625395 CLEC18BQ6UXF7 455 aa3.36□□□□□ -1.87
SEC23A-215ENST00000625395 SH2D5Q6ZV89 423 aa3.36□□□□□ -1.87
SEC23A-215ENST00000625395 EXOC8Q8IYI6 725 aa3.36□□□□□ -1.87
SEC23A-215ENST00000625395 PDILTQ8N807 584 aa3.36□□□□□ -1.87
SEC23A-215ENST00000625395 TRIML1Q8N9V2 468 aa3.36□□□□□ -1.87
SEC23A-215ENST00000625395 ATAD1Q8NBU5 361 aa3.36□□□□□ -1.87
SEC23A-215ENST00000625395 RNF149Q8NC42 400 aa3.36□□□□□ -1.87
SEC23A-215ENST00000625395 CNNM3Q8NE01 707 aa3.36□□□□□ -1.87
SEC23A-215ENST00000625395 MRGPRDQ8TDS7 321 aa3.36□□□□□ -1.87
SEC23A-215ENST00000625395 FGF11Q92914 225 aa3.36□□□□□ -1.87
SEC23A-215ENST00000625395 GIMAP5Q96F15 307 aa3.36□□□□□ -1.87
SEC23A-215ENST00000625395 MED8Q96G25 268 aa3.36□□□□□ -1.87
SEC23A-215ENST00000625395 MSANTD3Q96H12 275 aa3.36□□□□□ -1.87
SEC23A-215ENST00000625395 GMPPAQ96IJ6 420 aaPredicted RBP3.36□□□□□ -1.87
SEC23A-215ENST00000625395 CNOT6LQ96LI5 555 aaKnown RBP3.36□□□□□ -1.87
SEC23A-215ENST00000625395 SGK494Q96LW2 274 aa3.36□□□□□ -1.87
SEC23A-215ENST00000625395 ZMAT2Q96NC0 199 aaKnown RBP3.36□□□□□ -1.87
SEC23A-215ENST00000625395 KRT23Q9C075 422 aa3.36□□□□□ -1.87
SEC23A-215ENST00000625395 GPR88Q9GZN0 384 aa3.36□□□□□ -1.87
SEC23A-215ENST00000625395 SEMA6AQ9H2E6 1030 aa3.36□□□□□ -1.87
SEC23A-215ENST00000625395 ECT2Q9H8V3 914 aa3.36□□□□□ -1.87
SEC23A-215ENST00000625395 POLD4Q9HCU8 107 aa3.36□□□□□ -1.87
SEC23A-215ENST00000625395 OLFML3Q9NRN5 406 aa3.36□□□□□ -1.87
SEC23A-215ENST00000625395 AMACRQ9UHK6 382 aa3.36□□□□□ -1.87
SEC23A-215ENST00000625395 CENPEQ02224 2701 aa3.36□□□□□ -1.87
SEC23A-215ENST00000625395 CACNA1DQ01668 2161 aa3.36□□□□□ -1.87
SEC23A-215ENST00000625395 LRBAP50851 2863 aa3.36□□□□□ -1.87
SEC23A-215ENST00000625395 NID2Q14112 1375 aa3.36□□□□□ -1.87
SEC23A-215ENST00000625395 COL5A1P20908 1838 aaPredicted RBP3.35□□□□□ -1.87
SEC23A-215ENST00000625395 IGHV4-61A0A0C4DH41 118 aa3.35□□□□□ -1.87
SEC23A-215ENST00000625395 NDUFAF8A1L188 74 aa3.35□□□□□ -1.87
SEC23A-215ENST00000625395 FRMD3A2A2Y4 597 aa3.35□□□□□ -1.87
SEC23A-215ENST00000625395 MYO1GB0I1T2 1018 aa3.35□□□□□ -1.87
SEC23A-215ENST00000625395 J3KRW8 73 aa3.35□□□□□ -1.87
SEC23A-215ENST00000625395 ZNF821O75541 412 aaPredicted RBP3.35□□□□□ -1.87
SEC23A-215ENST00000625395 PSMD10O75832 226 aa3.35□□□□□ -1.87
SEC23A-215ENST00000625395 AP2A2O94973 939 aa3.35□□□□□ -1.87
SEC23A-215ENST00000625395 OR2C1O95371 312 aa3.35□□□□□ -1.87
SEC23A-215ENST00000625395 IGHV4-59P01825 116 aa3.35□□□□□ -1.87
SEC23A-215ENST00000625395 HLA-EP13747 358 aa3.35□□□□□ -1.87
SEC23A-215ENST00000625395 CKMT2P17540 419 aa3.35□□□□□ -1.87
SEC23A-215ENST00000625395 GABRR2P28476 465 aa3.35□□□□□ -1.87
SEC23A-215ENST00000625395 MAN1A1P33908 653 aa3.35□□□□□ -1.87
SEC23A-215ENST00000625395 ARL2P36404 184 aa3.35□□□□□ -1.87
SEC23A-215ENST00000625395 ARL3P36405 182 aa3.35□□□□□ -1.87
SEC23A-215ENST00000625395 WNT5AP41221 380 aa3.35□□□□□ -1.87
SEC23A-215ENST00000625395 CAMPP49913 170 aa3.35□□□□□ -1.87
SEC23A-215ENST00000625395 BMXP51813 675 aa3.35□□□□□ -1.87
SEC23A-215ENST00000625395 RPS18P62269 152 aaKnown RBP3.35□□□□□ -1.87
SEC23A-215ENST00000625395 PPARDQ03181 441 aa3.35□□□□□ -1.87
SEC23A-215ENST00000625395 MAMLD1Q13495 774 aa3.35□□□□□ -1.87
SEC23A-215ENST00000625395 SLC1A5Q15758 541 aa3.35□□□□□ -1.87
SEC23A-215ENST00000625395 IMMTQ16891 758 aaKnown RBP3.35□□□□□ -1.87
SEC23A-215ENST00000625395 HLA-BQ31612 363 aa3.35□□□□□ -1.87
SEC23A-215ENST00000625395 GLRA4Q5JXX5 417 aa3.35□□□□□ -1.87
SEC23A-215ENST00000625395 SPDYCQ5MJ68 293 aa3.35□□□□□ -1.87
SEC23A-215ENST00000625395 GCNT6Q5T4J0 391 aa3.35□□□□□ -1.87
SEC23A-215ENST00000625395 GKAP1Q5VSY0 366 aaPredicted RBP3.35□□□□□ -1.87
SEC23A-215ENST00000625395 CENPPQ6IPU0 288 aa3.35□□□□□ -1.87
SEC23A-215ENST00000625395 NOTUMQ6P988 496 aa3.35□□□□□ -1.87
SEC23A-215ENST00000625395 KLHL35Q6PF15 583 aa3.35□□□□□ -1.87
SEC23A-215ENST00000625395 ALKAL1Q6UXT8 129 aa3.35□□□□□ -1.87
SEC23A-215ENST00000625395 DENND5BQ6ZUT9 1274 aa3.35□□□□□ -1.87
SEC23A-215ENST00000625395 STXBP4Q6ZWJ1 553 aa3.35□□□□□ -1.87
SEC23A-215ENST00000625395 ERICH1Q86X53 443 aa3.35□□□□□ -1.87
SEC23A-215ENST00000625395 ALLCQ8N6M5 410 aa3.35□□□□□ -1.87
SEC23A-215ENST00000625395 PPFIBP2Q8ND30 876 aa3.35□□□□□ -1.87
SEC23A-215ENST00000625395 SEMA4DQ92854 862 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms