RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 SLC1A1P43005 524 aa12.83□□□□□ -0.36
SNX1-214ENST00000625244 DNASE1L1P49184 302 aa12.83□□□□□ -0.36
SNX1-214ENST00000625244 NR1H2P55055 460 aa12.83□□□□□ -0.36
SNX1-214ENST00000625244 RPS15AP62244 130 aaKnown RBP12.83□□□□□ -0.36
SNX1-214ENST00000625244 TNK1Q13470 666 aa12.83□□□□□ -0.36
SNX1-214ENST00000625244 ARHGAP19Q14CB8 494 aa12.83□□□□□ -0.36
SNX1-214ENST00000625244 TCEAL1Q15170 157 aa12.83□□□□□ -0.36
SNX1-214ENST00000625244 ACSF3Q4G176 576 aaPredicted RBP12.83□□□□□ -0.36
SNX1-214ENST00000625244 PTRHD1Q6GMV3 140 aaKnown RBP12.83□□□□□ -0.36
SNX1-214ENST00000625244 AFTPHQ6ULP2 937 aa12.83□□□□□ -0.36
SNX1-214ENST00000625244 QSOX2Q6ZRP7 698 aa12.83□□□□□ -0.36
SNX1-214ENST00000625244 OTOAQ7RTW8 1153 aa12.83□□□□□ -0.36
SNX1-214ENST00000625244 SLC26A11Q86WA9 606 aa12.83□□□□□ -0.36
SNX1-214ENST00000625244 GPALPP1Q8IXQ4 340 aa12.83□□□□□ -0.36
SNX1-214ENST00000625244 B3GNT7Q8NFL0 401 aa12.83□□□□□ -0.36
SNX1-214ENST00000625244 OR4L1Q8NH43 312 aa12.83□□□□□ -0.36
SNX1-214ENST00000625244 ASB15Q8WXK1 588 aa12.83□□□□□ -0.36
SNX1-214ENST00000625244 TM4SF19Q96DZ7 209 aa12.83□□□□□ -0.36
SNX1-214ENST00000625244 PKP4Q99569 1192 aa12.83□□□□□ -0.36
SNX1-214ENST00000625244 EBNA1BP2Q99848 306 aaKnown RBP12.83□□□□□ -0.36
SNX1-214ENST00000625244 DESI2Q9BSY9 194 aa12.83□□□□□ -0.36
SNX1-214ENST00000625244 NECTIN3Q9NQS3 549 aa12.83□□□□□ -0.36
SNX1-214ENST00000625244 EML6Q6ZMW3 1958 aa12.82□□□□□ -0.36
SNX1-214ENST00000625244 IGKV3D-11A0A0A0MRZ8 115 aa12.82□□□□□ -0.36
SNX1-214ENST00000625244 E7ENX8 843 aa12.82□□□□□ -0.36
SNX1-214ENST00000625244 PRMT5O14744 637 aaPredicted RBP12.82□□□□□ -0.36
SNX1-214ENST00000625244 SPOPO43791 374 aa12.82□□□□□ -0.36
SNX1-214ENST00000625244 MYO1DO94832 1006 aa12.82□□□□□ -0.36
SNX1-214ENST00000625244 B3GALT4O96024 378 aa12.82□□□□□ -0.36
SNX1-214ENST00000625244 IL2RAP01589 272 aa12.82□□□□□ -0.36
SNX1-214ENST00000625244 FPR1P21462 350 aa12.82□□□□□ -0.36
SNX1-214ENST00000625244 JAK1P23458 1154 aa12.82□□□□□ -0.36
SNX1-214ENST00000625244 COILP38432 576 aaPredicted RBP12.82□□□□□ -0.36
SNX1-214ENST00000625244 HADHBP55084 474 aaKnown RBP12.82□□□□□ -0.36
SNX1-214ENST00000625244 MEF2AQ02078 507 aaPredicted RBP12.82□□□□□ -0.36
SNX1-214ENST00000625244 TAP2Q03519 686 aa12.82□□□□□ -0.36
SNX1-214ENST00000625244 AFAP1L2Q8N4X5 818 aa12.82□□□□□ -0.36
SNX1-214ENST00000625244 CAMKVQ8NCB2 501 aa12.82□□□□□ -0.36
SNX1-214ENST00000625244 OR6P1Q8NGX9 317 aa12.82□□□□□ -0.36
SNX1-214ENST00000625244 ZNF480Q8WV37 535 aa12.82□□□□□ -0.36
SNX1-214ENST00000625244 SREK1Q8WXA9 508 aaKnown RBP12.82□□□□□ -0.36
SNX1-214ENST00000625244 ISL2Q96A47 359 aa12.82□□□□□ -0.36
SNX1-214ENST00000625244 LRRC45Q96CN5 670 aa12.82□□□□□ -0.36
SNX1-214ENST00000625244 WDR83Q9BRX9 315 aaKnown RBP12.82□□□□□ -0.36
SNX1-214ENST00000625244 C19orf24Q9BVV8 132 aa12.82□□□□□ -0.36
SNX1-214ENST00000625244 HEMGNQ9BXL5 484 aa12.82□□□□□ -0.36
SNX1-214ENST00000625244 SLC22A7Q9Y694 548 aa12.82□□□□□ -0.36
SNX1-214ENST00000625244 DSCAMO60469 2012 aa12.82□□□□□ -0.36
SNX1-214ENST00000625244 MGAM2Q2M2H8 2515 aa12.81□□□□□ -0.36
SNX1-214ENST00000625244 BTNL10A8MVZ5 291 aa12.81□□□□□ -0.36
SNX1-214ENST00000625244 APOC4-APOC2K7ER74 178 aa12.81□□□□□ -0.36
SNX1-214ENST00000625244 CASKO14936 926 aa12.81□□□□□ -0.36
SNX1-214ENST00000625244 KCNAB3O43448 404 aa12.81□□□□□ -0.36
SNX1-214ENST00000625244 LCMT2O60294 686 aaKnown RBP12.81□□□□□ -0.36
SNX1-214ENST00000625244 SOX30O94993 753 aa12.81□□□□□ -0.36
SNX1-214ENST00000625244 SLC16A8O95907 504 aa12.81□□□□□ -0.36
SNX1-214ENST00000625244 APOC2P02655 101 aa12.81□□□□□ -0.36
SNX1-214ENST00000625244 COMTP21964 271 aa12.81□□□□□ -0.36
SNX1-214ENST00000625244 SIX1Q15475 284 aaPredicted RBP12.81□□□□□ -0.36
SNX1-214ENST00000625244 CHRFAM7AQ494W8 412 aa12.81□□□□□ -0.36
SNX1-214ENST00000625244 FASTKD1Q53R41 847 aaKnown RBP12.81□□□□□ -0.36
SNX1-214ENST00000625244 MEI1Q5TIA1 1274 aa12.81□□□□□ -0.36
SNX1-214ENST00000625244 FAM47EQ6ZV65 393 aa12.81□□□□□ -0.36
SNX1-214ENST00000625244 ABHD13Q7L211 337 aa12.81□□□□□ -0.36
SNX1-214ENST00000625244 ASPGQ86U10 573 aa12.81□□□□□ -0.36
SNX1-214ENST00000625244 LACC1Q8IV20 430 aa12.81□□□□□ -0.36
SNX1-214ENST00000625244 LRRC56Q8IYG6 542 aaPredicted RBP12.81□□□□□ -0.36
SNX1-214ENST00000625244 FBXO15Q8NCQ5 510 aaPredicted RBP12.81□□□□□ -0.36
SNX1-214ENST00000625244 SLC13A3Q8WWT9 602 aa12.81□□□□□ -0.36
SNX1-214ENST00000625244 NCLNQ969V3 563 aa12.81□□□□□ -0.36
SNX1-214ENST00000625244 SCYL1Q96KG9 808 aa12.81□□□□□ -0.36
SNX1-214ENST00000625244 ZNF778Q96MU6 729 aa12.81□□□□□ -0.36
SNX1-214ENST00000625244 PPP1R2P1Q96PQ5 205 aa12.81□□□□□ -0.36
SNX1-214ENST00000625244 PANX3Q96QZ0 392 aa12.81□□□□□ -0.36
SNX1-214ENST00000625244 RASL10BQ96S79 203 aa12.81□□□□□ -0.36
SNX1-214ENST00000625244 FAM118BQ9BPY3 351 aa12.81□□□□□ -0.36
SNX1-214ENST00000625244 AARSD1Q9BTE6 412 aaKnown RBP12.81□□□□□ -0.36
SNX1-214ENST00000625244 P2RY12Q9H244 342 aa12.81□□□□□ -0.36
SNX1-214ENST00000625244 SLC6A15Q9H2J7 730 aa12.81□□□□□ -0.36
SNX1-214ENST00000625244 YAE1D1Q9NRH1 226 aa12.81□□□□□ -0.36
SNX1-214ENST00000625244 TMEM184CQ9NVA4 438 aa12.81□□□□□ -0.36
SNX1-214ENST00000625244 MARCH4Q9P2E8 410 aaPredicted RBP12.81□□□□□ -0.36
SNX1-214ENST00000625244 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.81□□□□□ -0.36
SNX1-214ENST00000625244 AHRRA9YTQ3 701 aa12.8□□□□□ -0.36
SNX1-214ENST00000625244 RNF223E7ERA6 249 aa12.8□□□□□ -0.36
SNX1-214ENST00000625244 WWP2O00308 870 aa12.8□□□□□ -0.36
SNX1-214ENST00000625244 KPNA5O15131 536 aa12.8□□□□□ -0.36
SNX1-214ENST00000625244 PJA2O43164 708 aa12.8□□□□□ -0.36
SNX1-214ENST00000625244 GALR3O60755 368 aaPredicted RBP12.8□□□□□ -0.36
SNX1-214ENST00000625244 PSIP1O75475 530 aaKnown RBP12.8□□□□□ -0.36
SNX1-214ENST00000625244 ZFAND5O76080 213 aa12.8□□□□□ -0.36
SNX1-214ENST00000625244 METTL18O95568 372 aa12.8□□□□□ -0.36
SNX1-214ENST00000625244 RFPL3SP0C7P2 107 aa12.8□□□□□ -0.36
SNX1-214ENST00000625244 CTNNA2P26232 953 aa12.8□□□□□ -0.36
SNX1-214ENST00000625244 HSD17B2P37059 387 aa12.8□□□□□ -0.36
SNX1-214ENST00000625244 GPR143P51810 404 aa12.8□□□□□ -0.36
SNX1-214ENST00000625244 DEFB134Q4QY38 66 aa12.8□□□□□ -0.36
SNX1-214ENST00000625244 THEMIS2Q5TEJ8 643 aa12.8□□□□□ -0.36
SNX1-214ENST00000625244 C11orf63Q6NUN7 778 aa12.8□□□□□ -0.36
SNX1-214ENST00000625244 RTL4Q6ZR62 310 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms