RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 ATP13A2Q9NQ11 1180 aa8.7□□□□□ -1.02
HDAC9-229ENST00000622668 TRPV5Q9NQA5 729 aa8.7□□□□□ -1.02
HDAC9-229ENST00000622668 MOCS1Q9NZB8 636 aa8.7□□□□□ -1.02
HDAC9-229ENST00000622668 RIMKLBQ9ULI2 386 aa8.7□□□□□ -1.02
HDAC9-229ENST00000622668 NAALAD2Q9Y3Q0 740 aa8.7□□□□□ -1.02
HDAC9-229ENST00000622668 ZCWPW2A0A1B0GU75 182 aa8.7□□□□□ -1.02
HDAC9-229ENST00000622668 CCT8L1PA6NM43 557 aa8.7□□□□□ -1.02
HDAC9-229ENST00000622668 SNTNA6NMZ2 147 aa8.7□□□□□ -1.02
HDAC9-229ENST00000622668 TRIM38O00635 465 aa8.7□□□□□ -1.02
HDAC9-229ENST00000622668 NPHS1O60500 1241 aa8.7□□□□□ -1.02
HDAC9-229ENST00000622668 ALBP02768 609 aa8.7□□□□□ -1.02
HDAC9-229ENST00000622668 ZNF888P0CJ79 500 aaPredicted RBP8.7□□□□□ -1.02
HDAC9-229ENST00000622668 CALB2P22676 271 aa8.7□□□□□ -1.02
HDAC9-229ENST00000622668 CXCR1P25024 350 aa8.7□□□□□ -1.02
HDAC9-229ENST00000622668 MESP2Q0VG99 397 aa8.7□□□□□ -1.02
HDAC9-229ENST00000622668 C18orf21Q32NC0 220 aaPredicted RBP8.7□□□□□ -1.02
HDAC9-229ENST00000622668 OR2T12Q8NG77 320 aa8.7□□□□□ -1.02
HDAC9-229ENST00000622668 OR10H5Q8NGA6 315 aa8.7□□□□□ -1.02
HDAC9-229ENST00000622668 OR5K2Q8NHB8 316 aa8.7□□□□□ -1.02
HDAC9-229ENST00000622668 ANKRD7Q92527 254 aa8.7□□□□□ -1.02
HDAC9-229ENST00000622668 RCN3Q96D15 328 aa8.7□□□□□ -1.02
HDAC9-229ENST00000622668 RPS6KA6Q9UK32 745 aa8.7□□□□□ -1.02
HDAC9-229ENST00000622668 TCRBV5S1A1TA0A578 114 aa8.7□□□□□ -1.02
HDAC9-229ENST00000622668 EIF3FO00303 357 aaPredicted RBP8.7□□□□□ -1.02
HDAC9-229ENST00000622668 ZNF749O43361 778 aa8.7□□□□□ -1.02
HDAC9-229ENST00000622668 C1orf105O95561 183 aa8.7□□□□□ -1.02
HDAC9-229ENST00000622668 LINGO3P0C6S8 592 aa8.7□□□□□ -1.02
HDAC9-229ENST00000622668 FAM58BPP0C7Q3 252 aa8.7□□□□□ -1.02
HDAC9-229ENST00000622668 CCR10P46092 362 aa8.7□□□□□ -1.02
HDAC9-229ENST00000622668 CCT3P49368 545 aaKnown RBP8.7□□□□□ -1.02
HDAC9-229ENST00000622668 KHKP50053 298 aa8.7□□□□□ -1.02
HDAC9-229ENST00000622668 GFERP55789 205 aa8.7□□□□□ -1.02
HDAC9-229ENST00000622668 MAT1AQ00266 395 aaKnown RBP8.7□□□□□ -1.02
HDAC9-229ENST00000622668 HENMT1Q5T8I9 393 aaKnown RBP8.7□□□□□ -1.02
HDAC9-229ENST00000622668 PMS2CLQ68D20 193 aa8.7□□□□□ -1.02
HDAC9-229ENST00000622668 OR52E8Q6IFG1 317 aa8.7□□□□□ -1.02
HDAC9-229ENST00000622668 ZNF544Q6NX49 715 aa8.7□□□□□ -1.02
HDAC9-229ENST00000622668 HSDL2Q6YN16 418 aa8.7□□□□□ -1.02
HDAC9-229ENST00000622668 STX19Q8N4C7 294 aa8.7□□□□□ -1.02
HDAC9-229ENST00000622668 NEIL2Q969S2 332 aa8.7□□□□□ -1.02
HDAC9-229ENST00000622668 RTP4Q96DX8 246 aa8.7□□□□□ -1.02
HDAC9-229ENST00000622668 LRFN3Q9BTN0 628 aa8.7□□□□□ -1.02
HDAC9-229ENST00000622668 UGT2B28Q9BY64 529 aa8.7□□□□□ -1.02
HDAC9-229ENST00000622668 ZDHHC18Q9NUE0 388 aa8.7□□□□□ -1.02
HDAC9-229ENST00000622668 EGFL7Q9UHF1 273 aa8.7□□□□□ -1.02
HDAC9-229ENST00000622668 OR5K3A6NET4 321 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 TFECO14948 347 aaPredicted RBP8.69□□□□□ -1.02
HDAC9-229ENST00000622668 TLX3O43711 291 aaPredicted RBP8.69□□□□□ -1.02
HDAC9-229ENST00000622668 NRP2O60462 931 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 IGHEP01854 428 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 IL3P08700 152 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 AOAHP28039 575 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 NR0B1P51843 470 aaKnown RBP8.69□□□□□ -1.02
HDAC9-229ENST00000622668 CRISP3P54108 245 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 CTBP2P56545 445 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 RAB15P59190 212 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 DCDC1P59894 354 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 UBAP2LQ14157 1087 aaKnown RBP8.69□□□□□ -1.02
HDAC9-229ENST00000622668 RCAN2Q14206 197 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 SNCBQ16143 134 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 TMEM35AQ53FP2 167 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 LRRC74BQ6ZQY2 392 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 LIMS2Q7Z4I7 341 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 STK32CQ86UX6 486 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 IQCHQ86VS3 1027 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 AGGF1Q8N302 714 aaeCLIP8.69□□□□□ -1.02
HDAC9-229ENST00000622668 GALNT6Q8NCL4 622 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 ZNF354BQ96LW1 612 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 COL21A1Q96P44 957 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 DOHHQ9BU89 302 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 EXOSC4Q9NPD3 245 aaKnown RBP8.69□□□□□ -1.02
HDAC9-229ENST00000622668 CUEDC1Q9NWM3 386 aaPredicted RBP8.69□□□□□ -1.02
HDAC9-229ENST00000622668 OXSMQ9NWU1 459 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 PPP4R1LQ9P1A2 415 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 PTGFRNQ9P2B2 879 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 ANKRD12Q6UB98 2062 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 STX16-NPEPL1H3BU86 382 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 STX16O14662 325 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 DEAF1O75398 565 aaPredicted RBP8.69□□□□□ -1.02
HDAC9-229ENST00000622668 CBX6O95503 412 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 FDXRP22570 491 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 RPL34P49207 117 aaKnown RBP8.69□□□□□ -1.02
HDAC9-229ENST00000622668 SLC7A2P52569 658 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 NXPH1P58417 271 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 ARHGAP19Q14CB8 494 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 SLC14A2Q15849 920 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 DPY19L1Q2PZI1 675 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 CASP12Q6UXS9 341 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 ARMC8Q8IUR7 673 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 DPP10Q8N608 796 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 OR52B6Q8NGF0 335 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 FRS2Q8WU20 508 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 ZUFSPQ96AP4 578 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 DNAJA3Q96EY1 480 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 NRBF2Q96F24 287 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 EURLQ9NYK6 297 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 MYH15Q9Y2K3 1946 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 ELOA3DA6NLF2 546 aaPredicted RBP8.69□□□□□ -1.02
HDAC9-229ENST00000622668 XKRYO14609 159 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 KIF1CO43896 1103 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms