RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 TTYH1Q9H313 450 aaPredicted RBP11.99□□□□□ -0.49
LITAF-221ENST00000622633 ZDHHC4Q9NPG8 344 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 PRDM9Q9NQV7 894 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 LIPT1Q9Y234 373 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 FCF1Q9Y324 198 aaKnown RBP11.99□□□□□ -0.49
LITAF-221ENST00000622633 PCDHGB1Q9Y5G3 927 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 PTGES3LE9PB15 166 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 SMLR1H3BR10 107 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 PITPNM1O00562 1244 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 KHNYNO15037 678 aaKnown RBP11.98□□□□□ -0.49
LITAF-221ENST00000622633 RNF224P0DH78 156 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 ZP3P21754 424 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 HNF4AP41235 474 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 ACLYP53396 1101 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 EPS8Q12929 822 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 DUSP6Q16828 381 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 ARMC4Q5T2S8 1044 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 HECTD3Q5T447 861 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 SUSD1Q6UWL2 747 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 PAMR1Q6UXH9 720 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 GALNT10Q86SR1 603 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 NLRP8Q86W28 1048 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 SERPINA9Q86WD7 417 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 NKAIN4Q8IVV8 208 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 TRIM48Q8IWZ4 208 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 KRTCAP2Q8N6L1 136 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 OR6K2Q8NGY2 324 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 SETD6Q8TBK2 473 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 RORBQ92753 470 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 PPP3R2Q96LZ3 170 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 EGFL8Q99944 293 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 TTLL2Q9BWV7 592 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 ZNF275Q9NSD4 429 aaPredicted RBP11.98□□□□□ -0.49
LITAF-221ENST00000622633 TMEM161AQ9NX61 479 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 LHX3Q9UBR4 397 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 PRSS21Q9Y6M0 314 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 A0A1B0GVM2 712 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 CHURC1-FNTBB4DL54 471 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 TNFRSF21O75509 655 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 ALPPP05187 535 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 HK1P19367 917 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 CD6P30203 668 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 SMAD2Q15796 467 aaKnown RBP11.98□□□□□ -0.49
LITAF-221ENST00000622633 OR7E24Q6IFN5 339 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 ZNF425Q6IV72 752 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 ZNF782Q6ZMW2 699 aaPredicted RBP11.98□□□□□ -0.49
LITAF-221ENST00000622633 STK40Q8N2I9 435 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 C9orf62Q8N4C0 152 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 CLRN3Q8NCR9 226 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 OR8J3Q8NGG0 315 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 RAD51AP1Q96B01 352 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 CASD1Q96PB1 797 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 ZBTB18Q99592 522 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 FAM83DQ9H4H8 585 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 ERVK13-1Q9NX77 482 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 TRPS1Q9UHF7 1281 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 PCDHB7Q9Y5E2 793 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 A3GALT2U3KPV4 340 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 GBF1Q92538 1859 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 CHD5Q8TDI0 1954 aa11.98□□□□□ -0.49
LITAF-221ENST00000622633 PQLC2LA1A4F0 135 aa11.97□□□□□ -0.49
LITAF-221ENST00000622633 STMND1H3BQB6 276 aa11.97□□□□□ -0.49
LITAF-221ENST00000622633 IFRD1O00458 451 aaPredicted RBP11.97□□□□□ -0.49
LITAF-221ENST00000622633 DSCR3O14972 297 aa11.97□□□□□ -0.49
LITAF-221ENST00000622633 EIF1BO60739 113 aaKnown RBP11.97□□□□□ -0.49
LITAF-221ENST00000622633 SLC25A14O95258 325 aaPredicted RBP11.97□□□□□ -0.49
LITAF-221ENST00000622633 CST1P01037 141 aa11.97□□□□□ -0.49
LITAF-221ENST00000622633 HBQ1P09105 142 aa11.97□□□□□ -0.49
LITAF-221ENST00000622633 EIF1P41567 113 aaKnown RBP11.97□□□□□ -0.49
LITAF-221ENST00000622633 RHOAP61586 193 aa11.97□□□□□ -0.49
LITAF-221ENST00000622633 CAP1Q01518 475 aa11.97□□□□□ -0.49
LITAF-221ENST00000622633 MAPKAPK3Q16644 382 aa11.97□□□□□ -0.49
LITAF-221ENST00000622633 PTCHD3Q3KNS1 767 aa11.97□□□□□ -0.49
LITAF-221ENST00000622633 SPANXN4Q5MJ08 99 aa11.97□□□□□ -0.49
LITAF-221ENST00000622633 ADGRF1Q5T601 910 aa11.97□□□□□ -0.49
LITAF-221ENST00000622633 TRILQ7L0X0 811 aa11.97□□□□□ -0.49
LITAF-221ENST00000622633 CHST9Q7L1S5 443 aa11.97□□□□□ -0.49
LITAF-221ENST00000622633 MSRB3Q8IXL7 192 aa11.97□□□□□ -0.49
LITAF-221ENST00000622633 TIGD4Q8IY51 512 aa11.97□□□□□ -0.49
LITAF-221ENST00000622633 PHACTR4Q8IZ21 702 aa11.97□□□□□ -0.49
LITAF-221ENST00000622633 C8orf59Q8N0T1 100 aaPredicted RBP11.97□□□□□ -0.49
LITAF-221ENST00000622633 ATG16L2Q8NAA4 619 aa11.97□□□□□ -0.49
LITAF-221ENST00000622633 CLHC1Q8NHS4 586 aa11.97□□□□□ -0.49
LITAF-221ENST00000622633 UPF1Q92900 1129 aaKnown RBP eCLIP11.97□□□□□ -0.491e-6■□□□□ 10.7
LITAF-221ENST00000622633 REPS1Q96D71 796 aa11.97□□□□□ -0.49
LITAF-221ENST00000622633 MTFMTQ96DP5 389 aaKnown RBP11.97□□□□□ -0.49
LITAF-221ENST00000622633 ARL5BQ96KC2 179 aa11.97□□□□□ -0.49
LITAF-221ENST00000622633 GPR137Q96N19 417 aa11.97□□□□□ -0.49
LITAF-221ENST00000622633 UGT2B28Q9BY64 529 aa11.97□□□□□ -0.49
LITAF-221ENST00000622633 ELOVL6Q9H5J4 265 aa11.97□□□□□ -0.49
LITAF-221ENST00000622633 ZBTB20Q9HC78 741 aaPredicted RBP11.97□□□□□ -0.49
LITAF-221ENST00000622633 FAM118AQ9NWS6 357 aa11.97□□□□□ -0.49
LITAF-221ENST00000622633 SLC25A37Q9NYZ2 338 aa11.97□□□□□ -0.49
LITAF-221ENST00000622633 MALT1Q9UDY8 824 aa11.97□□□□□ -0.49
LITAF-221ENST00000622633 ZFR2Q9UPR6 939 aaKnown RBP11.97□□□□□ -0.49
LITAF-221ENST00000622633 EFCAB9A8MZ26 197 aa11.97□□□□□ -0.49
LITAF-221ENST00000622633 H7C4K7 107 aa11.97□□□□□ -0.49
LITAF-221ENST00000622633 K7ERQ8 282 aa11.97□□□□□ -0.49
LITAF-221ENST00000622633 GNGT2O14610 69 aa11.97□□□□□ -0.49
LITAF-221ENST00000622633 CHMP24386 653 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms