RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 CXCL12P48061 93 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 PRDX1Q06830 199 aaKnown RBP10.05□□□□□ -0.8
VPS11-208ENST00000621676 FZD2Q14332 565 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 NKG7Q16617 165 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 SLC5A12Q1EHB4 618 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 LRIT3Q3SXY7 679 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 KIAA1161Q6NSJ0 714 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 ARMC6Q6NXE6 501 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 TMEM154Q6P9G4 183 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 ZNF793Q6ZN11 406 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 OR2L3Q8NG85 312 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 C16orf78Q8WTQ4 265 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 ZDHHC1Q8WTX9 485 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 SLCO4A1Q96BD0 722 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 BARD1Q99728 777 aaKnown RBP10.05□□□□□ -0.8
VPS11-208ENST00000621676 SLC35A5Q9BS91 424 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 C1orf21Q9H246 121 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 SLAMF7Q9NQ25 335 aa10.05□□□□□ -0.8
VPS11-208ENST00000621676 FAF1Q9UNN5 650 aaPredicted RBP10.05□□□□□ -0.8
VPS11-208ENST00000621676 IGHV1OR15-9A0A0B4J2B8 117 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 A0A1W2PRB8 838 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 EI24O14681 340 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 B4GAT1O43505 415 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 EPN2O95208 641 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 CHRM5P08912 532 aaPredicted RBP10.04□□□□□ -0.8
VPS11-208ENST00000621676 F3P13726 295 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 TPD52P55327 224 aaPredicted RBP10.04□□□□□ -0.8
VPS11-208ENST00000621676 EIF2B5Q13144 721 aaKnown RBP10.04□□□□□ -0.8
VPS11-208ENST00000621676 NDUFAF5Q5TEU4 345 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 TBPL2Q6SJ96 375 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 ADGRF3Q8IZF5 1079 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 RAB42Q8N4Z0 105 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 NELL1Q92832 810 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 AHCYL2Q96HN2 611 aaKnown RBP10.04□□□□□ -0.8
VPS11-208ENST00000621676 ZNF583Q96ND8 569 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 ADAP2Q9NPF8 381 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 TMEM9Q9P0T7 183 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 TMEM181Q9P2C4 612 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 DHCR7Q9UBM7 475 aaKnown RBP10.04□□□□□ -0.8
VPS11-208ENST00000621676 A0A0A6YYC8 382 aaPredicted RBP10.04□□□□□ -0.8
VPS11-208ENST00000621676 I3L1I5 382 aaPredicted RBP10.04□□□□□ -0.8
VPS11-208ENST00000621676 ENO2P09104 434 aaPredicted RBP10.04□□□□□ -0.8
VPS11-208ENST00000621676 IL10P22301 178 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 PSMA3P25788 255 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 POU1F1P28069 291 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 CSTF1Q05048 431 aaKnown RBP10.04□□□□□ -0.8
VPS11-208ENST00000621676 PIGFQ07326 219 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 FOXM1Q08050 763 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 SIM2Q14190 667 aaPredicted RBP10.04□□□□□ -0.8
VPS11-208ENST00000621676 GPR19Q15760 415 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 MINDY4Q4G0A6 757 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 BCL7AQ4VC05 210 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 CCNJQ5T5M9 372 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 KHDRBS2Q5VWX1 349 aaKnown RBP10.04□□□□□ -0.8
VPS11-208ENST00000621676 TMEM107Q6UX40 140 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 CMTM7Q96FZ5 175 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 C16orf58Q96GQ5 468 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 FBXL20Q96IG2 436 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 EXO1Q9UQ84 846 aaKnown RBP10.04□□□□□ -0.8
VPS11-208ENST00000621676 TESMINQ9Y4I5 508 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 J3KTA2 159 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 M0QX08 132 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 GNB5O14775 395 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 P2RX6O15547 441 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 TBX6O95947 436 aaPredicted RBP10.04□□□□□ -0.8
VPS11-208ENST00000621676 NR4A1P22736 598 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 HRH2P25021 359 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 CD38P28907 300 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 TIA1P31483 386 aaKnown RBP eCLIP10.04□□□□□ -0.81e-6■□□□□ 9.1
VPS11-208ENST00000621676 MASP1P48740 699 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 CDK9P50750 372 aaKnown RBP10.04□□□□□ -0.8
VPS11-208ENST00000621676 PGDP52209 483 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 OR1D5P58170 312 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 LIPJQ5W064 366 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 GRHL2Q6ISB3 625 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 TRIM46Q7Z4K8 759 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 NRROSQ86YC3 692 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 TBC1D21Q8IYX1 336 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 TCAIMQ8N3R3 496 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 L3MBTL4Q8NA19 623 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 NFKBIDQ8NI38 313 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 ASB9Q96DX5 294 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 ZNF184Q99676 751 aaPredicted RBP10.04□□□□□ -0.8
VPS11-208ENST00000621676 LRRC61Q9BV99 259 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 BRINP2Q9C0B6 783 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 KLHL4Q9C0H6 718 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 RUVBL1Q9Y265 456 aaKnown RBP10.04□□□□□ -0.8
VPS11-208ENST00000621676 SLC17A4Q9Y2C5 497 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 COLEC10Q9Y6Z7 277 aa10.04□□□□□ -0.8
VPS11-208ENST00000621676 PLXND1Q9Y4D7 1925 aa10.03□□□□□ -0.8
VPS11-208ENST00000621676 ELOVL7A1L3X0 281 aa10.03□□□□□ -0.8
VPS11-208ENST00000621676 CLDN24A6NM45 220 aa10.03□□□□□ -0.8
VPS11-208ENST00000621676 CXCR6O00574 342 aa10.03□□□□□ -0.8
VPS11-208ENST00000621676 VPS4BO75351 444 aa10.03□□□□□ -0.8
VPS11-208ENST00000621676 BCAS2O75934 225 aaPredicted RBP10.03□□□□□ -0.8
VPS11-208ENST00000621676 CST1P01037 141 aa10.03□□□□□ -0.8
VPS11-208ENST00000621676 TPP2P29144 1249 aaPredicted RBP10.03□□□□□ -0.8
VPS11-208ENST00000621676 BMP8BP34820 402 aa10.03□□□□□ -0.8
VPS11-208ENST00000621676 OR1D4P47884 311 aa10.03□□□□□ -0.8
VPS11-208ENST00000621676 NCBP2P52298 156 aaKnown RBP eCLIP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms