RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 OR9A4Q8NGU2 314 aa7.37□□□□□ -1.23
CLK1-215ENST00000621181 DYDC1Q8WWB3 177 aa7.37□□□□□ -1.23
CLK1-215ENST00000621181 POM121Q96HA1 1249 aa7.37□□□□□ -1.23
CLK1-215ENST00000621181 VKORC1Q9BQB6 163 aa7.37□□□□□ -1.23
CLK1-215ENST00000621181 TACO1Q9BSH4 297 aaKnown RBP7.37□□□□□ -1.23
CLK1-215ENST00000621181 RAB6BQ9NRW1 208 aa7.37□□□□□ -1.23
CLK1-215ENST00000621181 NKIRAS1Q9NYS0 192 aa7.37□□□□□ -1.23
CLK1-215ENST00000621181 SENP1Q9P0U3 644 aa7.37□□□□□ -1.23
CLK1-215ENST00000621181 TBK1Q9UHD2 729 aa7.37□□□□□ -1.23
CLK1-215ENST00000621181 ZNF148Q9UQR1 794 aa7.37□□□□□ -1.23
CLK1-215ENST00000621181 EXOC1LA0A1B0GW35 172 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 OR2W5A6NFC9 320 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 E5RI56 91 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 NDC80O14777 642 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 HAT1O14929 419 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 PFDN6O15212 129 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 ZNHIT1O43257 154 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 SLC25A12O75746 678 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 CDC123O75794 336 aaPredicted RBP7.36□□□□□ -1.23
CLK1-215ENST00000621181 FAM155BO75949 473 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 NSA2O95478 260 aaKnown RBP7.36□□□□□ -1.23
CLK1-215ENST00000621181 SLC16A8O95907 504 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 C1QAP02745 245 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 STATHP02808 62 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 CATP04040 527 aaKnown RBP7.36□□□□□ -1.23
CLK1-215ENST00000621181 IL1RNP18510 177 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 CHRM3P20309 590 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 RPS3P23396 243 aaKnown RBP eCLIP7.36□□□□□ -1.23
CLK1-215ENST00000621181 FMO4P31512 558 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 STX2P32856 288 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 RPL22P35268 128 aaKnown RBP7.36□□□□□ -1.23
CLK1-215ENST00000621181 HSD17B2P37059 387 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 ART1P52961 327 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 PNLIPRP1P54315 467 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 SESN2P58004 480 aaPredicted RBP7.36□□□□□ -1.23
CLK1-215ENST00000621181 TAS2R50P59544 299 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 CRADDP78560 199 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 ABRAXAS2Q15018 415 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 SH2D5Q6ZV89 423 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 GSTA5Q7RTV2 222 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 PRSS41Q7RTY9 318 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 CCDC91Q7Z6B0 441 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 ANKRD37Q7Z713 158 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 TBC1D1Q86TI0 1168 aaPredicted RBP7.36□□□□□ -1.23
CLK1-215ENST00000621181 DOLPP1Q86YN1 238 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 PLD3Q8IV08 490 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 OR51Q1Q8NH59 317 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 PHF10Q8WUB8 498 aaKnown RBP7.36□□□□□ -1.23
CLK1-215ENST00000621181 UTP4Q969X6 686 aaKnown RBP7.36□□□□□ -1.23
CLK1-215ENST00000621181 SCMH1Q96GD3 660 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 EBNA1BP2Q99848 306 aaKnown RBP7.36□□□□□ -1.23
CLK1-215ENST00000621181 MMP25Q9NPA2 562 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 HCN3Q9P1Z3 774 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 LRFN1Q9P244 771 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 ABCA4P78363 2273 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 AKAP6Q13023 2319 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.36□□□□□ -1.23
CLK1-215ENST00000621181 A0A1W2PPM1 405 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 TCRBV7S3A2A0A539 114 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 H3BMM5 538 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 H7BY64 318 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 MAN1A2O60476 641 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 EDF1O60869 148 aaKnown RBP7.36□□□□□ -1.23
CLK1-215ENST00000621181 NIPSNAP2O75323 286 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 SPAG7O75391 227 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 BANF1O75531 89 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 NEURL1O76050 574 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 SP1P08047 785 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 KRT16P08779 473 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 T-ENOLP0DO92 83 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 ABATP80404 500 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 RELAQ04206 551 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 NSDHLQ15738 373 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 ZKSCAN8Q15776 578 aaPredicted RBP7.36□□□□□ -1.23
CLK1-215ENST00000621181 KLHL38Q2WGJ6 581 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 PCID2Q5JVF3 399 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 SPDYAQ5MJ70 313 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 CTSL3PQ5NE16 218 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 MRNIPQ6NTE8 343 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 PAPD4Q6PIY7 484 aaKnown RBP7.36□□□□□ -1.23
CLK1-215ENST00000621181 CENPUQ71F23 418 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 SDCCAG8Q86SQ7 713 aaPredicted RBP7.36□□□□□ -1.23
CLK1-215ENST00000621181 TMEM200AQ86VY9 491 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 SIAH3Q8IW03 269 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 PPIL6Q8IXY8 311 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 M1APQ8TC57 530 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 C10orf82Q8WW14 230 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 PRAP1Q96NZ9 151 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 BIRC8Q96P09 236 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 DMRTA2Q96SC8 542 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 PKP4Q99569 1192 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 LPAR4Q99677 370 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 ACSS3Q9H6R3 686 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 TREX1Q9NSU2 369 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 CRYL1Q9Y2S2 319 aa7.36□□□□□ -1.23
CLK1-215ENST00000621181 DNAJC13O75165 2243 aa7.35□□□□□ -1.23
CLK1-215ENST00000621181 E7ENX8 843 aa7.35□□□□□ -1.23
CLK1-215ENST00000621181 GOLGA8TH3BQL2 631 aa7.35□□□□□ -1.23
CLK1-215ENST00000621181 SGK494L7N484 410 aa7.35□□□□□ -1.23
CLK1-215ENST00000621181 TFECO14948 347 aaPredicted RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms