RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 ZNF630Q2M218 657 aaPredicted RBP6.95□□□□□ -1.3
COLCA1-205ENST00000620864 TMEM69Q5SWH9 247 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 MBOAT1Q6ZNC8 495 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 JAGN1Q8N5M9 183 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 ARHGAP23Q9P227 1491 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 TRBV23OR9-2A0A075B6M9 112 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 FAM149AA5PLN7 773 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 AGPSO00116 658 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 FOXD2O60548 495 aaPredicted RBP6.95□□□□□ -1.3
COLCA1-205ENST00000620864 TBX10O75333 385 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 RNASEH2AO75792 299 aaKnown RBP6.95□□□□□ -1.3
COLCA1-205ENST00000620864 ZNF35P13682 527 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 FRKP42685 505 aaPredicted RBP6.95□□□□□ -1.3
COLCA1-205ENST00000620864 AVPR1BP47901 424 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 RPIAP49247 311 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 HSD11B2P80365 405 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 GTF2BQ00403 316 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 SNTA1Q13424 505 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 DSC3Q14574 896 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 FAM174BQ3ZCQ3 159 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 MINDY4Q4G0A6 757 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 PDSS1Q5T2R2 415 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 FAM69AQ5T7M9 428 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 C19orf48Q6RUI8 117 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 ARL9Q6T311 187 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 ZSWIM9Q86XI8 627 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 SCML4Q8N228 414 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 SEMA6DQ8NFY4 1073 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 OR7D4Q8NG98 312 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 OR14C36Q8NHC7 312 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 OSBPL2Q9H1P3 480 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 PORCNQ9H237 461 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 PLEKHA3Q9HB20 300 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 SLAMF7Q9NQ25 335 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 NPAP1Q9NZP6 1156 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.95□□□□□ -1.3
COLCA1-205ENST00000620864 LACTBL1A8MY62 500 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 PI15O43692 258 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 ITGA5P08648 1049 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 UBBP0CG47 229 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 UBCP0CG48 685 aaKnown RBP6.95□□□□□ -1.3
COLCA1-205ENST00000620864 CCKBRP32239 447 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 RPS27AP62979 156 aaKnown RBP6.95□□□□□ -1.3
COLCA1-205ENST00000620864 UBA52P62987 128 aaKnown RBP6.95□□□□□ -1.3
COLCA1-205ENST00000620864 HTD2P86397 168 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 SP2Q02086 613 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 CHIT1Q13231 466 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 RAP1GAP2Q684P5 730 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 MOB1BQ7L9L4 216 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 BRSK1Q8TDC3 778 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 DENND1AQ8TEH3 1009 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 MYRFLQ96LU7 910 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 TGM7Q96PF1 710 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 FAM120CQ9NX05 1096 aaKnown RBP6.95□□□□□ -1.3
COLCA1-205ENST00000620864 ACTR10Q9NZ32 417 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 NUBP2Q9Y5Y2 271 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 NWD1Q149M9 1564 aa6.95□□□□□ -1.3
COLCA1-205ENST00000620864 TP73O15350 636 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 NOBOXO60393 691 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 PNPP00491 289 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 CDK1P06493 297 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 THBS3P49746 956 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 NOMO3P69849 1222 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 ZNF616Q08AN1 781 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 ABHD18Q0P651 414 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 KANSL1Q7Z3B3 1105 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 SLC15A3Q8IY34 581 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 CERS5Q8N5B7 392 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 BRI3BPQ8WY22 251 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 TMBIM1Q969X1 311 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 SLC22A18Q96BI1 424 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 RNF32Q9H0A6 362 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 VWDEQ8N2E2 1590 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 VIPP01282 170 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 OXTRP30559 389 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 GMPRP36959 345 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 DSTNP60981 165 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 RRAS2P62070 204 aaPredicted RBP6.94□□□□□ -1.3
COLCA1-205ENST00000620864 SEMG2Q02383 582 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 GALNT1Q10472 559 aaPredicted RBP6.94□□□□□ -1.3
COLCA1-205ENST00000620864 STK11Q15831 433 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 AMZ1Q400G9 498 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 DPPA2Q7Z7J5 298 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 C12orf45Q8N5I9 185 aaPredicted RBP6.94□□□□□ -1.3
COLCA1-205ENST00000620864 TOP6BLQ8N6T0 577 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 TCEAL2Q9H3H9 227 aaPredicted RBP6.94□□□□□ -1.3
COLCA1-205ENST00000620864 RPF2Q9H7B2 306 aaKnown RBP6.94□□□□□ -1.3
COLCA1-205ENST00000620864 UFSP2Q9NUQ7 469 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 RLIMQ9NVW2 624 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 PIH1D1Q9NWS0 290 aaKnown RBP6.94□□□□□ -1.3
COLCA1-205ENST00000620864 EXTL2Q9UBQ6 330 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 TCAF1Q9Y4C2 921 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 UBR1Q8IWV7 1749 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 CPED1A4D0V7 1026 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 GRM6O15303 877 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 PROM1O43490 865 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 TBL1XO60907 577 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 DUSP11O75319 330 aaKnown RBP6.94□□□□□ -1.3
COLCA1-205ENST00000620864 CHRNA1P02708 482 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 CBSLP0DN79 551 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms