RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 ARMC4Q5T2S8 1044 aa18.77■□□□□ 0.6
PDLIM3-212ENST00000620787 TPRG1Q6ZUI0 275 aa18.77■□□□□ 0.6
PDLIM3-212ENST00000620787 KRT73Q86Y46 540 aa18.77■□□□□ 0.6
PDLIM3-212ENST00000620787 SLC44A2Q8IWA5 706 aaPredicted RBP18.77■□□□□ 0.6
PDLIM3-212ENST00000620787 LAX1Q8IWV1 398 aa18.77■□□□□ 0.6
PDLIM3-212ENST00000620787 GALNT12Q8IXK2 581 aa18.77■□□□□ 0.6
PDLIM3-212ENST00000620787 BCL7CQ8WUZ0 217 aaPredicted RBP18.77■□□□□ 0.6
PDLIM3-212ENST00000620787 ASIC4Q96FT7 647 aa18.77■□□□□ 0.6
PDLIM3-212ENST00000620787 PHOX2BQ99453 314 aa18.77■□□□□ 0.6
PDLIM3-212ENST00000620787 C2orf49Q9BVC5 232 aaPredicted RBP18.77■□□□□ 0.6
PDLIM3-212ENST00000620787 EXOSC4Q9NPD3 245 aaKnown RBP18.77■□□□□ 0.6
PDLIM3-212ENST00000620787 BOLA1Q9Y3E2 137 aa18.77■□□□□ 0.6
PDLIM3-212ENST00000620787 H0YIV9 168 aa18.76■□□□□ 0.59
PDLIM3-212ENST00000620787 MPZL2O60487 215 aa18.76■□□□□ 0.59
PDLIM3-212ENST00000620787 HSD3B1P14060 373 aa18.76■□□□□ 0.59
PDLIM3-212ENST00000620787 LHCGRP22888 699 aa18.76■□□□□ 0.59
PDLIM3-212ENST00000620787 HSD3B2P26439 372 aa18.76■□□□□ 0.59
PDLIM3-212ENST00000620787 TUFMP49411 452 aaKnown RBP18.76■□□□□ 0.59
PDLIM3-212ENST00000620787 HBA1P69905 142 aa18.76■□□□□ 0.59
PDLIM3-212ENST00000620787 SMAD3P84022 425 aaKnown RBP18.76■□□□□ 0.59
PDLIM3-212ENST00000620787 TBRG1Q3YBR2 411 aa18.76■□□□□ 0.59
PDLIM3-212ENST00000620787 GRHL2Q6ISB3 625 aa18.76■□□□□ 0.59
PDLIM3-212ENST00000620787 RASGRP3Q8IV61 690 aa18.76■□□□□ 0.59
PDLIM3-212ENST00000620787 AQP11Q8NBQ7 271 aa18.76■□□□□ 0.59
PDLIM3-212ENST00000620787 GEMIN6Q8WXD5 167 aaKnown RBP18.76■□□□□ 0.59
PDLIM3-212ENST00000620787 GDF15Q99988 308 aa18.76■□□□□ 0.59
PDLIM3-212ENST00000620787 SRRQ9GZT4 340 aa18.76■□□□□ 0.59
PDLIM3-212ENST00000620787 BRF2Q9HAW0 419 aa18.76■□□□□ 0.59
PDLIM3-212ENST00000620787 SGK2Q9HBY8 427 aa18.76■□□□□ 0.59
PDLIM3-212ENST00000620787 SLC25A19Q9HC21 320 aa18.76■□□□□ 0.59
PDLIM3-212ENST00000620787 PRAMEF33A0A0G2JMD5 474 aa18.76■□□□□ 0.59
PDLIM3-212ENST00000620787 MEIOCA2RUB1 952 aa18.76■□□□□ 0.59
PDLIM3-212ENST00000620787 MGAT4DA6NG13 374 aa18.76■□□□□ 0.59
PDLIM3-212ENST00000620787 TBKBP1A7MCY6 615 aa18.76■□□□□ 0.59
PDLIM3-212ENST00000620787 NDUFB5O43674 189 aa18.76■□□□□ 0.59
PDLIM3-212ENST00000620787 PRAMEF10O60809 474 aa18.76■□□□□ 0.59
PDLIM3-212ENST00000620787 IGSF6O95976 241 aa18.76■□□□□ 0.59
PDLIM3-212ENST00000620787 ENDOUP21128 410 aaKnown RBP18.76■□□□□ 0.59
PDLIM3-212ENST00000620787 SERPINA4P29622 427 aa18.76■□□□□ 0.59
PDLIM3-212ENST00000620787 SOX3P41225 446 aa18.76■□□□□ 0.59
PDLIM3-212ENST00000620787 ALDH9A1P49189 494 aa18.76■□□□□ 0.59
PDLIM3-212ENST00000620787 CRISP1P54107 249 aa18.76■□□□□ 0.59
PDLIM3-212ENST00000620787 RHAGQ02094 409 aa18.76■□□□□ 0.59
PDLIM3-212ENST00000620787 EEF1A2Q05639 463 aaKnown RBP18.76■□□□□ 0.59
PDLIM3-212ENST00000620787 PLD1Q13393 1074 aa18.76■□□□□ 0.59
PDLIM3-212ENST00000620787 CAMK2BQ13554 666 aa18.76■□□□□ 0.59
PDLIM3-212ENST00000620787 GANABQ14697 944 aaKnown RBP18.76■□□□□ 0.59
PDLIM3-212ENST00000620787 DGKKQ5KSL6 1271 aa18.76■□□□□ 0.59
PDLIM3-212ENST00000620787 MFSD14CQ5VZR4 134 aa18.76■□□□□ 0.59
PDLIM3-212ENST00000620787 TMPRSS11AQ6ZMR5 421 aa18.76■□□□□ 0.59
PDLIM3-212ENST00000620787 GPR156Q8NFN8 814 aa18.76■□□□□ 0.59
PDLIM3-212ENST00000620787 OR4K1Q8NGD4 311 aa18.76■□□□□ 0.59
PDLIM3-212ENST00000620787 OR52N2Q8NGI0 321 aa18.76■□□□□ 0.59
PDLIM3-212ENST00000620787 GOT1L1Q8NHS2 421 aaPredicted RBP18.76■□□□□ 0.59
PDLIM3-212ENST00000620787 TRMT61AQ96FX7 289 aaKnown RBP18.76■□□□□ 0.59
PDLIM3-212ENST00000620787 WDFY2Q96P53 400 aa18.76■□□□□ 0.59
PDLIM3-212ENST00000620787 DEPDC7Q96QD5 511 aa18.76■□□□□ 0.59
PDLIM3-212ENST00000620787 SLC35A5Q9BS91 424 aa18.76■□□□□ 0.59
PDLIM3-212ENST00000620787 MAPRE3Q9UPY8 281 aa18.76■□□□□ 0.59
PDLIM3-212ENST00000620787 PCM1Q15154 2024 aa18.76■□□□□ 0.59
PDLIM3-212ENST00000620787 HMX3A6NHT5 357 aa18.75■□□□□ 0.59
PDLIM3-212ENST00000620787 GADD45GO95257 159 aa18.75■□□□□ 0.59
PDLIM3-212ENST00000620787 GASTP01350 101 aa18.75■□□□□ 0.59
PDLIM3-212ENST00000620787 IL7P13232 177 aa18.75■□□□□ 0.59
PDLIM3-212ENST00000620787 AZGP1P25311 298 aaKnown RBP18.75■□□□□ 0.59
PDLIM3-212ENST00000620787 PSPHP78330 225 aa18.75■□□□□ 0.59
PDLIM3-212ENST00000620787 PCDH1Q08174 1060 aa18.75■□□□□ 0.59
PDLIM3-212ENST00000620787 RBBP4Q09028 425 aa18.75■□□□□ 0.59
PDLIM3-212ENST00000620787 FCHO2Q0JRZ9 810 aa18.75■□□□□ 0.59
PDLIM3-212ENST00000620787 ELAVL2Q12926 359 aaKnown RBP18.75■□□□□ 0.59
PDLIM3-212ENST00000620787 FRMPD2BQ6IN97 320 aa18.75■□□□□ 0.59
PDLIM3-212ENST00000620787 GALNT6Q8NCL4 622 aa18.75■□□□□ 0.59
PDLIM3-212ENST00000620787 SIMC1Q8NDZ2 872 aa18.75■□□□□ 0.59
PDLIM3-212ENST00000620787 UPF1Q92900 1129 aaKnown RBP eCLIP18.75■□□□□ 0.59
PDLIM3-212ENST00000620787 SCRN2Q96FV2 425 aa18.75■□□□□ 0.59
PDLIM3-212ENST00000620787 RNF170Q96K19 258 aa18.75■□□□□ 0.59
PDLIM3-212ENST00000620787 TMEM246Q9BRR3 403 aa18.75■□□□□ 0.59
PDLIM3-212ENST00000620787 FZD3Q9NPG1 666 aa18.75■□□□□ 0.59
PDLIM3-212ENST00000620787 ENOPH1Q9UHY7 261 aa18.75■□□□□ 0.59
PDLIM3-212ENST00000620787 SLC35F4A4IF30 521 aa18.75■□□□□ 0.59
PDLIM3-212ENST00000620787 GLTPD2A6NH11 291 aa18.75■□□□□ 0.59
PDLIM3-212ENST00000620787 ENTPD6O75354 484 aa18.75■□□□□ 0.59
PDLIM3-212ENST00000620787 CELF2O95319 508 aaKnown RBP18.75■□□□□ 0.59
PDLIM3-212ENST00000620787 TRAPPC2P0DI81 140 aa18.75■□□□□ 0.59
PDLIM3-212ENST00000620787 TRAPPC2BP0DI82 140 aa18.75■□□□□ 0.59
PDLIM3-212ENST00000620787 ATP1B2P14415 290 aaPredicted RBP18.75■□□□□ 0.59
PDLIM3-212ENST00000620787 OR1D2P34982 312 aa18.75■□□□□ 0.59
PDLIM3-212ENST00000620787 CRYBB2P43320 205 aa18.75■□□□□ 0.59
PDLIM3-212ENST00000620787 SLAMF1Q13291 335 aa18.75■□□□□ 0.59
PDLIM3-212ENST00000620787 LAS2Q8IYD9 372 aa18.75■□□□□ 0.59
PDLIM3-212ENST00000620787 VPS35Q96QK1 796 aa18.75■□□□□ 0.59
PDLIM3-212ENST00000620787 OR4K3Q96R72 315 aa18.75■□□□□ 0.59
PDLIM3-212ENST00000620787 NMNAT1Q9HAN9 279 aaPredicted RBP18.75■□□□□ 0.59
PDLIM3-212ENST00000620787 PLSCR3Q9NRY6 295 aa18.75■□□□□ 0.59
PDLIM3-212ENST00000620787 C1GALT1Q9NS00 363 aa18.75■□□□□ 0.59
PDLIM3-212ENST00000620787 A0A1W2PQ09 198 aa18.74■□□□□ 0.59
PDLIM3-212ENST00000620787 GREM1O60565 184 aa18.74■□□□□ 0.59
PDLIM3-212ENST00000620787 CSO75390 466 aaKnown RBP18.74■□□□□ 0.59
PDLIM3-212ENST00000620787 SLC10A3P09131 477 aa18.74■□□□□ 0.59
PDLIM3-212ENST00000620787 CKMT1AP12532 417 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms