RNA–Protein interactions for RNA: ENST00000619117.1

C9orf50-202, Transcript of chromosome 9 open reading frame 50, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf50, Length 796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf50-202ENST00000619117 VPS11Q9H270 941 aa14.35□□□□□ -0.11
C9orf50-202ENST00000619117 VPS4AQ9UN37 437 aa14.35□□□□□ -0.11
C9orf50-202ENST00000619117 FLNBO75369 2602 aaKnown RBP14.34□□□□□ -0.11
C9orf50-202ENST00000619117 PRMT3O60678 531 aa14.34□□□□□ -0.11
C9orf50-202ENST00000619117 B4GALT2O60909 372 aa14.34□□□□□ -0.11
C9orf50-202ENST00000619117 GFAPP14136 432 aa14.34□□□□□ -0.11
C9orf50-202ENST00000619117 EPB42P16452 691 aa14.34□□□□□ -0.11
C9orf50-202ENST00000619117 SERPINB1P30740 379 aa14.34□□□□□ -0.11
C9orf50-202ENST00000619117 MSH2P43246 934 aa14.34□□□□□ -0.11
C9orf50-202ENST00000619117 TSFMP43897 325 aaKnown RBP14.34□□□□□ -0.11
C9orf50-202ENST00000619117 OR4D2P58180 307 aa14.34□□□□□ -0.11
C9orf50-202ENST00000619117 PCBP2Q15366 365 aaKnown RBP eCLIP14.34□□□□□ -0.11
C9orf50-202ENST00000619117 HIST2H2ACQ16777 129 aaPredicted RBP14.34□□□□□ -0.11
C9orf50-202ENST00000619117 PFKFB4Q16877 469 aa14.34□□□□□ -0.11
C9orf50-202ENST00000619117 HIST2H2AA3Q6FI13 130 aa14.34□□□□□ -0.11
C9orf50-202ENST00000619117 METTL2BQ6P1Q9 378 aaKnown RBP14.34□□□□□ -0.11
C9orf50-202ENST00000619117 TRIM40Q6P9F5 258 aa14.34□□□□□ -0.11
C9orf50-202ENST00000619117 ABHD17CQ6PCB6 329 aa14.34□□□□□ -0.11
C9orf50-202ENST00000619117 TRMT10CQ7L0Y3 403 aaKnown RBP14.34□□□□□ -0.11
C9orf50-202ENST00000619117 LAS2Q8IYD9 372 aa14.34□□□□□ -0.11
C9orf50-202ENST00000619117 PLD6Q8N2A8 252 aaKnown RBP14.34□□□□□ -0.11
C9orf50-202ENST00000619117 M1APQ8TC57 530 aa14.34□□□□□ -0.11
C9orf50-202ENST00000619117 ADAMTS18Q8TE60 1221 aa14.34□□□□□ -0.11
C9orf50-202ENST00000619117 CNDP1Q96KN2 507 aa14.34□□□□□ -0.11
C9orf50-202ENST00000619117 LPAR4Q99677 370 aa14.34□□□□□ -0.11
C9orf50-202ENST00000619117 BARD1Q99728 777 aaKnown RBP14.34□□□□□ -0.11
C9orf50-202ENST00000619117 MMP25Q9NPA2 562 aa14.34□□□□□ -0.11
C9orf50-202ENST00000619117 PRDM9Q9NQV7 894 aa14.34□□□□□ -0.11
C9orf50-202ENST00000619117 MMACHCQ9Y4U1 282 aa14.34□□□□□ -0.11
C9orf50-202ENST00000619117 SCN3AQ9NY46 2000 aa14.34□□□□□ -0.11
C9orf50-202ENST00000619117 SPENQ96T58 3664 aaKnown RBP14.34□□□□□ -0.11
C9orf50-202ENST00000619117 SHANK1Q9Y566 2161 aa14.33□□□□□ -0.11
C9orf50-202ENST00000619117 A0A0G2JN53 185 aa14.33□□□□□ -0.12
C9orf50-202ENST00000619117 TCRBV16S1A1N1A0A5B0 115 aa14.33□□□□□ -0.12
C9orf50-202ENST00000619117 DYTNA2CJ06 578 aa14.33□□□□□ -0.12
C9orf50-202ENST00000619117 POC1B-GALNT4F8VUJ3 575 aa14.33□□□□□ -0.12
C9orf50-202ENST00000619117 B3GALT2O43825 422 aa14.33□□□□□ -0.12
C9orf50-202ENST00000619117 UQCRHP07919 91 aa14.33□□□□□ -0.12
C9orf50-202ENST00000619117 RBP1P09455 135 aa14.33□□□□□ -0.12
C9orf50-202ENST00000619117 RHOXF2BP0C7M4 288 aa14.33□□□□□ -0.12
C9orf50-202ENST00000619117 COL6A2P12110 1019 aa14.33□□□□□ -0.12
C9orf50-202ENST00000619117 UQCRFS1P47985 274 aa14.33□□□□□ -0.12
C9orf50-202ENST00000619117 PLA2G16P53816 162 aa14.33□□□□□ -0.12
C9orf50-202ENST00000619117 MTTPP55157 894 aa14.33□□□□□ -0.12
C9orf50-202ENST00000619117 RAB38P57729 211 aa14.33□□□□□ -0.12
C9orf50-202ENST00000619117 ARG2P78540 354 aa14.33□□□□□ -0.12
C9orf50-202ENST00000619117 TGM3Q08188 693 aa14.33□□□□□ -0.12
C9orf50-202ENST00000619117 RUNX2Q13950 521 aa14.33□□□□□ -0.12
C9orf50-202ENST00000619117 TSNAXIP1Q2TAA8 658 aa14.33□□□□□ -0.12
C9orf50-202ENST00000619117 ABHD17BQ5VST6 288 aa14.33□□□□□ -0.12
C9orf50-202ENST00000619117 GRHL2Q6ISB3 625 aa14.33□□□□□ -0.12
C9orf50-202ENST00000619117 H3F3CQ6NXT2 135 aa14.33□□□□□ -0.12
C9orf50-202ENST00000619117 MED27Q6P2C8 311 aa14.33□□□□□ -0.12
C9orf50-202ENST00000619117 CISD2Q8N5K1 135 aaKnown RBP14.33□□□□□ -0.12
C9orf50-202ENST00000619117 TEX9Q8N6V9 391 aa14.33□□□□□ -0.12
C9orf50-202ENST00000619117 UHMK1Q8TAS1 419 aaKnown RBP14.33□□□□□ -0.12
C9orf50-202ENST00000619117 ZNF473Q8WTR7 871 aaKnown RBP14.33□□□□□ -0.12
C9orf50-202ENST00000619117 HAS2Q92819 552 aa14.33□□□□□ -0.12
C9orf50-202ENST00000619117 C19orf60Q96EN9 201 aa14.33□□□□□ -0.12
C9orf50-202ENST00000619117 PTCHD1Q96NR3 888 aa14.33□□□□□ -0.12
C9orf50-202ENST00000619117 SERINC2Q96SA4 455 aa14.33□□□□□ -0.12
C9orf50-202ENST00000619117 RHOXF2Q9BQY4 288 aa14.33□□□□□ -0.12
C9orf50-202ENST00000619117 MS4A8Q9BY19 250 aa14.33□□□□□ -0.12
C9orf50-202ENST00000619117 ASF1BQ9NVP2 202 aa14.33□□□□□ -0.12
C9orf50-202ENST00000619117 TEKT2Q9UIF3 430 aa14.33□□□□□ -0.12
C9orf50-202ENST00000619117 TNPO3Q9Y5L0 923 aaKnown RBP14.33□□□□□ -0.12
C9orf50-202ENST00000619117 LRRK2Q5S007 2527 aa14.32□□□□□ -0.12
C9orf50-202ENST00000619117 EXOC1LA0A1B0GW35 172 aa14.32□□□□□ -0.12
C9orf50-202ENST00000619117 TRIM49D1C9J1S8 452 aa14.32□□□□□ -0.12
C9orf50-202ENST00000619117 FAM227AF5H4B4 570 aa14.32□□□□□ -0.12
C9orf50-202ENST00000619117 RIPK2O43353 540 aa14.32□□□□□ -0.12
C9orf50-202ENST00000619117 UGDHO60701 494 aa14.32□□□□□ -0.12
C9orf50-202ENST00000619117 MAOAP21397 527 aa14.32□□□□□ -0.12
C9orf50-202ENST00000619117 GNLYP22749 145 aa14.32□□□□□ -0.12
C9orf50-202ENST00000619117 PIK3CGP48736 1102 aa14.32□□□□□ -0.12
C9orf50-202ENST00000619117 SLC26A5P58743 744 aa14.32□□□□□ -0.12
C9orf50-202ENST00000619117 BTG2P78543 158 aa14.32□□□□□ -0.12
C9orf50-202ENST00000619117 ACTN3Q08043 901 aaPredicted RBP14.32□□□□□ -0.12
C9orf50-202ENST00000619117 TMEM35AQ53FP2 167 aa14.32□□□□□ -0.12
C9orf50-202ENST00000619117 RPUSD3Q6P087 351 aaKnown RBP14.32□□□□□ -0.12
C9orf50-202ENST00000619117 SCUBE1Q8IWY4 988 aa14.32□□□□□ -0.12
C9orf50-202ENST00000619117 AMER2Q8N7J2 671 aa14.32□□□□□ -0.12
C9orf50-202ENST00000619117 SRFBP1Q8NEF9 429 aaKnown RBP14.32□□□□□ -0.12
C9orf50-202ENST00000619117 ARMC2Q8NEN0 867 aa14.32□□□□□ -0.12
C9orf50-202ENST00000619117 OR7G3Q8NG95 312 aa14.32□□□□□ -0.12
C9orf50-202ENST00000619117 KCNC2Q96PR1 638 aa14.32□□□□□ -0.12
C9orf50-202ENST00000619117 F2RL3Q96RI0 385 aa14.32□□□□□ -0.12
C9orf50-202ENST00000619117 TXLNGYQ9BZA5 131 aa14.32□□□□□ -0.12
C9orf50-202ENST00000619117 ROGDIQ9GZN7 287 aa14.32□□□□□ -0.12
C9orf50-202ENST00000619117 ZNF358Q9NW07 568 aa14.32□□□□□ -0.12
C9orf50-202ENST00000619117 MAP10Q9P2G4 905 aa14.32□□□□□ -0.12
C9orf50-202ENST00000619117 CPSF2Q9P2I0 782 aaKnown RBP14.32□□□□□ -0.12
C9orf50-202ENST00000619117 ADGRE2Q9UHX3 823 aa14.32□□□□□ -0.12
C9orf50-202ENST00000619117 TMCO1Q9UM00 188 aa14.32□□□□□ -0.12
C9orf50-202ENST00000619117 NTNG1Q9Y2I2 539 aa14.32□□□□□ -0.12
C9orf50-202ENST00000619117 TSC22D4Q9Y3Q8 395 aa14.32□□□□□ -0.12
C9orf50-202ENST00000619117 ANGPTL3Q9Y5C1 460 aa14.32□□□□□ -0.12
C9orf50-202ENST00000619117 COPG1Q9Y678 874 aaKnown RBP14.32□□□□□ -0.12
C9orf50-202ENST00000619117 TRAV17A0A0B4J275 112 aa14.31□□□□□ -0.12
C9orf50-202ENST00000619117 LRRC14BA6NHZ5 514 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms